prot_C-tenellus_contig11535.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11535.4.1
Unique Nameprot_C-tenellus_contig11535.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length175
Homology
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: D7G1U0_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U0_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 1.540e-53
Identity = 90/114 (78.95%), Postives = 103/114 (90.35%), Query Frame = 0
Query:   62 MCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 175
            M S VEGQESQ+VT ELEP Q+IRAEAGNLVFMEDGIEMDT+TGGG SSMF+RVITGQNMFVTDYVN+G  + +V LGTDVPSKI+RLPL+ YGG V+CQRGAFLAGSH+I+I+
Sbjct:    1 MASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQ 114          
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A1Z5KFL0_FISSO (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFL0_FISSO)

HSP 1 Score: 154 bits (388), Expect = 6.730e-43
Identity = 70/135 (51.85%), Postives = 106/135 (78.52%), Query Frame = 0
Query:   41 AKEPEVTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 175
            ++ P +T++D   +  PIDFD+ + +EG ESQIVTIEL PNQ++RAE+G ++++ +G+EM+T+TGGG+S+ F+R++TGQN F++DY   G    RVALGTD PSKI+RL + +YGG +VCQ+GA L  SH+I+++
Sbjct:   32 SQTPTLTSVD-GVVGEPIDFDLAAKIEGNESQIVTIELRPNQVLRAESGAMMYLTEGVEMNTTTGGGLSAGFRRMMTGQNFFISDYTYTGNTVGRVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDVQ 165          
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S0C9P2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=6 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9P2_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.240e-42
Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 0
Query:   45 EVTNIDRAA---LAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKR--VALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 175
            E+TN   +A   +  PIDFD+ S +EG ESQIVTIELEPNQ++RAE+G +++M +G+ M+T+TGGGMS+ FKR++TGQN F++DY   G    +  VALGTD PSKIIRL + DYGG +VCQ+GA L  SH+I IE
Sbjct:   21 EITNAATSADGVVGLPIDFDVSSKIEGNESQIVTIELEPNQVLRAESGAMMYMTEGVTMETTTGGGMSAGFKRMMTGQNAFISDYRYDGEPGTKGLVALGTDFPSKIIRLDVKDYGGKIVCQKGALLCASHTINIE 156          
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S4QQK5_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQK5_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.070e-42
Identity = 79/147 (53.74%), Postives = 107/147 (72.79%), Query Frame = 0
Query:   33 SVQKQSDNAKEPE--VTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKR--VALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 175
            S     D A+ PE  +T+ D      PI+FD+ S +EG+ESQIVT+ +EP Q++RAE+G L++M DGIEM+T++GGGMS+ FKR++TGQN+F++DY   G    R  VALGTD PSKIIRL  + YGG +VCQ+GA L  SH+I+IE
Sbjct:   79 STSSSRDVARVPEGGLTSSDGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKRLLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIE 225          
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S4QQY9_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQY9_9STRA)

HSP 1 Score: 153 bits (386), Expect = 5.060e-42
Identity = 79/147 (53.74%), Postives = 107/147 (72.79%), Query Frame = 0
Query:   33 SVQKQSDNAKEPE--VTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKR--VALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 175
            S     D A+ PE  +T+ D      PI+FD+ S +EG+ESQIVT+ +EP Q++RAE+G L++M DGIEM+T++GGGMS+ FKR++TGQN+F++DY   G    R  VALGTD PSKIIRL  + YGG +VCQ+GA L  SH+I+IE
Sbjct:   79 STSSSRDVARVPEGGLTSSDGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKRLLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIE 225          
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A6U0KGL8_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0KGL8_9STRA)

HSP 1 Score: 147 bits (370), Expect = 5.270e-41
Identity = 70/131 (53.44%), Postives = 98/131 (74.81%), Query Frame = 0
Query:   47 TNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKG--LVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 175
            T+ D      PIDFD+ S +EG ESQIVT+ LEP Q++RAE+G+++FM DGI M+T+TGGGMS+ FKR++TGQN+F++D+  +G       +ALGTD PSKI+RL +  YGG +V Q+GA L  SH+++IE
Sbjct:   91 TSSDGVVATHPIDFDVASKIEGNESQIVTVALEPGQVLRAESGSMMFMTDGITMETTTGGGMSAGFKRMLTGQNVFISDFRYEGEPATTGLIALGTDFPSKIVRLNIKQYGGKIVAQKGALLCASHTVDIE 221          
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S1VUA2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VUA2_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.020e-40
Identity = 69/120 (57.50%), Postives = 99/120 (82.50%), Query Frame = 0
Query:   57 PIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYV-NKGLVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 175
            PI+FD+ + +EG ESQIVT+ LEPNQ++RAE+G ++FM DG+EM+T+TGGG+S+ F+R++TGQN F++DYV N+     +VALGTD PSKI+RL +++YGG + CQ+GA L  SH+I+IE
Sbjct:  119 PINFDVAAKIEGNESQIVTVTLEPNQVLRAESGAMMFMTDGVEMNTTTGGGLSTGFQRMLTGQNFFISDYVYNRPTGKGQVALGTDFPSKIVRLNVAEYGGKITCQKGALLCASHTIDIE 238          
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S3L1B2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1B2_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.020e-39
Identity = 73/138 (52.90%), Postives = 99/138 (71.74%), Query Frame = 0
Query:   38 SDNAKEPEVTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNK-RVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEI 174
            +D A  PE           PIDFD+ S +EG ESQIVTI LEP Q++RAE+G +++M  G+EM+T+TGGG+SS F R++TGQN F++DY  +G     +VALGTD PSKI+RL + +YGG +VCQ+GA L  SH+I+I
Sbjct:   52 NDLAVPPESRLSKDGVAGRPIDFDIQSKIEGNESQIVTITLEPGQVLRAESGAMMYMTAGVEMNTTTGGGLSSGFSRMLTGQNFFISDYSYQGETGTGQVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDI 189          
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A485LR40_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR40_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.200e-39
Identity = 69/146 (47.26%), Postives = 101/146 (69.18%), Query Frame = 0
Query:   30 PLSSVQKQSDNAKEPEVTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 175
            P+SS        + P  T ++      PIDF   + + GQESQIV I L+PNQ +RAE+G +++M DG++MDT+T GG+    KR++TG+N F+T+Y   G  + +V LGT VPSKI+ + L+D+GG+++CQ+GAFLAGSH+I IE
Sbjct:   82 PVSSPSSNPPTMESPSATAVEEVPQYTPIDFSTAAQIVGQESQIVHITLQPNQKLRAESGAMIYMTDGVQMDTNTAGGVQQGLKRMMTGENFFLTEYSYTGTSSGQVCLGTSVPSKIVHMQLADFGGSLICQKGAFLAGSHTIGIE 227          
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S2WLF3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLF3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.500e-39
Identity = 70/138 (50.72%), Postives = 100/138 (72.46%), Query Frame = 0
Query:   38 SDNAKEPEVTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 175
            S++ +E  V + D       IDF+  S +EG +SQIVT+ LEP Q++RAE+G +++M DG+EM+TSTGGG+ + FKR +TGQN+F++DY  KG     VALGTD PSKI+RL L ++ G +VCQ+GA L  SH+++IE
Sbjct:   29 SNSVEEAVVVSSDGVVATHAIDFNTASRIEGSDSQIVTVRLEPGQVLRAESGGMMYMTDGVEMNTSTGGGVGAGFKRFLTGQNVFISDYTYKGDRFGIVALGTDFPSKIMRLSLPEWDGKIVCQKGALLCASHTVDIE 166          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U0_ECTSI1.540e-5378.95Altered inheritance of mitochondria protein 24, mi... [more]
A0A1Z5KFL0_FISSO6.730e-4351.85Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S0C9P2_9STRA1.240e-4257.35Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S4QQK5_9STRA2.070e-4253.74Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S4QQY9_9STRA5.060e-4253.74Altered inheritance of mitochondria protein 24, mi... [more]
A0A6U0KGL8_9STRA5.270e-4153.44Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S1VUA2_9STRA1.020e-4057.50Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S3L1B2_9STRA1.020e-3952.90Altered inheritance of mitochondria protein 24, mi... [more]
A0A485LR40_9STRA1.200e-3947.26Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S2WLF3_9STRA1.500e-3950.72Altered inheritance of mitochondria protein 24, mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 66..174
e-value: 4.2E-23
score: 82.2
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10Mitochondrial biogenesis AIM24coord: 61..175
e-value: 6.4E-30
score: 106.0
NoneNo IPR availablePANTHERPTHR43657TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEINcoord: 37..175
NoneNo IPR availablePANTHERPTHR43657:SF1TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEINcoord: 37..175
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 67..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11535contigC-tenellus_contig11535:3487..5205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11535.4.1mRNA_C-tenellus_contig11535.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11535 3306..5205 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11535.4.1 ID=prot_C-tenellus_contig11535.4.1|Name=mRNA_C-tenellus_contig11535.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=175bp
MASRLVPLARRGVLQYHSRNPRLIRYVVRPLSSVQKQSDNAKEPEVTNID
RAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEM
DTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKRVALGTDVPSKIIRLP
LSDYGGAVVCQRGAFLAGSHSIEIE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002838AIM24
IPR036983AIM24_sf
IPR016031Trp_RNA-bd_attenuator-like_dom