prot_C-tenellus_contig11420.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11420.1.1
Unique Nameprot_C-tenellus_contig11420.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length237
Homology
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BLAST of mRNA_C-tenellus_contig11420.1.1 vs. uniprot
Match: D8LKG0_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG0_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 9.510e-48
Identity = 102/215 (47.44%), Postives = 131/215 (60.93%), Query Frame = 0 
Query:    3 WITIVDEGTNEQYYYNSVTAETSWELGEEERIASGIGDNNSNEEKGQQGSVSISEEIGQQSNID--WQHEVLSEFHVPEEVSELAGRSGSAQILPRTTTGELSKLIHWYFTGVQAGDPYREHFVTGNNWNHEHKEFEPKLSFFAFESAVEHAEHYWVEEAEAPFRARLRRPKSKFSRDITKWEKRTADRK----RGHFSFFKPIAPLWVKVSWGG 211
            W+   D+   + Y+ N+ T E+SW+LG +ER+ASGI   +  ++    G  S S+ +  +S+I   W+ EVL  F VP+EVSE  GR+GSA I PRT  G  S+L  W    ++A DPYREHF TG  W  EH EFEPKL F+AF++AVEH E YWVEEAEAPFR RL+R   KFSRDI  WE R   +K    +G+     P   L     WGG
Sbjct:   11 WVEEQDDD-GDVYFVNADTMESSWDLGTDERLASGIYHPSGGDDDALIGPYSSSQTLEAESSISSSWRDEVLVGFQVPQEVSEAVGRAGSAHIWPRTVDGRPSRLERWDV--LKASDPYREHFSTGEAWRLEHPEFEPKLCFYAFDTAVEHVERYWVEEAEAPFRCRLQRDGLKFSRDIATWEARAPAKKNDNDKGNSGVGSPGGDLDGDEHWGG 222
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11420.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKG0_ECTSI9.510e-4847.44WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..59
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 1..27
score: 8.689

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11420contigC-tenellus_contig11420:5..2036 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11420.1.1mRNA_C-tenellus_contig11420.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11420 5..2036 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11420.1.1 ID=prot_C-tenellus_contig11420.1.1|Name=mRNA_C-tenellus_contig11420.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=237bp
SSWITIVDEGTNEQYYYNSVTAETSWELGEEERIASGIGDNNSNEEKGQQ
GSVSISEEIGQQSNIDWQHEVLSEFHVPEEVSELAGRSGSAQILPRTTTG
ELSKLIHWYFTGVQAGDPYREHFVTGNNWNHEHKEFEPKLSFFAFESAVE
HAEHYWVEEAEAPFRARLRRPKSKFSRDITKWEKRTADRKRGHFSFFKPI
APLWVKVSWGGGGGGGGWGGRGGGGGGEGGGGGWWS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom