prot_C-tenellus_contig11327.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11327.1.1
Unique Nameprot_C-tenellus_contig11327.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length89
Homology
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Match: UPI001D0245D6 (uncharacterized protein LOC123072166 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D0245D6)

HSP 1 Score: 57.8 bits (138), Expect = 9.290e-8
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0
Query:    2 QPSNSPNLNIMDLCFFRSLKCWVIWEWFGSVEEMVRFIKKHYEEYDETTLERARQLRFVVYNQVLRYKGGNDSSVEHTE 80
            QP NSP+LNI+DLCFFRSL+         S+ E++  +++ Y+ YD  TL R+         +++R KGG    + H +
Sbjct:  236 QPPNSPDLNILDLCFFRSLQSHTDCRAPQSIRELIEGVEEEYQNYDVNTLARSFVTLQSCMREIMREKGGIGYKIPHMQ 314          
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Match: UPI001D0257F7 (uncharacterized protein LOC123043747 n=2 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D0257F7)

HSP 1 Score: 57.8 bits (138), Expect = 9.610e-8
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0
Query:    2 QPSNSPNLNIMDLCFFRSLKCWVIWEWFGSVEEMVRFIKKHYEEYDETTLERARQLRFVVYNQVLRYKGGNDSSVEHTE 80
            QP NSP+LNI+DLCFFRSL+         S+ E++  +++ Y+ YD  TL R+         +++R KGG    + H +
Sbjct:  505 QPPNSPDLNILDLCFFRSLQSHTDCRAPQSIRELIEGVEEEYQNYDVNTLARSFVTLQSCMREIMREKGGIGYKIPHMQ 583          
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Match: A0A7S2FC44_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FC44_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 9.800e-8
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    2 QPSNSPNLNIMDLCFFRSLKCWV--IWEWFGSVEEMVRFIKKHYEEYDETTLERARQLRFVVYNQVLRYKGGNDSSVE 77
            QP+ SP+LN+ DL FFRSLKC    + E F SVEEM+++I++ YEE     L+R        Y  +L++ G ND S E
Sbjct:   65 QPAQSPDLNVNDLGFFRSLKCAATNVAEAF-SVEEMIKYIRQAYEEMPADKLDRMFMSLINNYRLLLKHDGDNDFSQE 141          
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Match: UPI0008452092 (uncharacterized protein LOC123046124 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI0008452092)

HSP 1 Score: 56.6 bits (135), Expect = 2.350e-7
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 0
Query:    3 PSNSPNLNIMDLCFFRSLKCWVIWEWFGSVEEMVRFIKKHYEEYDETTLERARQLRFVVYNQVLRYKGGNDSSVEHTE 80
            P NSP+LNI+DLCFFRSL+         S+ E++  +++ Y+ YD  TL R+         +++R KGG    + H +
Sbjct:  154 PPNSPDLNILDLCFFRSLQSHTDCRAPQSIRELIEGVEEEYQNYDVNTLARSFMTLQSCMREIMREKGGIGYKIPHMQ 231          
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Match: UPI0007EFBF42 (uncharacterized protein LOC108207092 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFBF42)

HSP 1 Score: 56.6 bits (135), Expect = 2.390e-7
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 0
Query:    2 QPSNSPNLNIMDLCFFRSLKCWVIWEWFGSVEEMVRFIKKHYEEYDETTLERARQLRFVVYNQVLRYKGGNDSSVEHTEGKEEAV 86
            QP NSP+LNI+DL FFRS++  +  +    V++M+  + + Y E D TTL         + N+VL+ KG ND  V H   K+ A 
Sbjct:  389 QPPNSPDLNILDLGFFRSIQSLMHKKMPKDVDDMMEAVHEAYFELDATTLGNVWLSYQYIMNEVLKVKGSNDYLVPHVNKKKLAA 473          
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Match: UPI00053FF3FD (uncharacterized protein LOC104886291 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FF3FD)

HSP 1 Score: 56.2 bits (134), Expect = 3.250e-7
Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 0
Query:    2 QPSNSPNLNIMDLCFFRSLKCWVIWEWFGSVEEMVRFIKKHYEEYDETTLERARQLRFVVYNQVLRYKGGNDSSVEHTEGK 82
            QP NSP+LNI+DL FFRS++  +  +   S++ ++  + + Y E D TTL         V N++L+  GGN+ +V H   K
Sbjct:  340 QPPNSPDLNILDLGFFRSIQSLMHKKIPKSIDSLLEAVNQAYNELDHTTLSNVWLSLQYVMNEILKVGGGNNYNVPHVNKK 420          
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Match: UPI0007F03AA8 (uncharacterized protein LOC108201509 n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F03AA8)

HSP 1 Score: 55.8 bits (133), Expect = 4.440e-7
Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 0
Query:    2 QPSNSPNLNIMDLCFFRSLKCWVIWEWFGSVEEMVRFIKKHYEEYDETTLERARQLRFVVYNQVLRYKGGNDSSVEHTEGKEEAV 86
            QP NSP+LNI+DL FFRS++  +  +    V++M+  +   Y E + TTL         V N+VL+ KG ND  V H   K+ A 
Sbjct:  349 QPPNSPDLNILDLGFFRSIQSLMHKKMPKDVDDMLEAVHHAYNELEPTTLGNVWLSYQYVMNEVLKVKGSNDYLVPHVNKKKLAA 433          
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Match: UPI00053F5678 (uncharacterized protein LOC104887556 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F5678)

HSP 1 Score: 55.5 bits (132), Expect = 6.100e-7
Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 0
Query:    2 QPSNSPNLNIMDLCFFRSLKCWVIWEWFGSVEEMVRFIKKHYEEYDETTLERARQLRFVVYNQVLRYKGGNDSSVEHTEGK 82
            QP NSP+LNI+DL FFRS++  +  +   +++ ++  + + + E D TTL         V N+VL+  GGN+ +V H   K
Sbjct:  378 QPPNSPDLNILDLGFFRSIQSLMHKKMTKNIDSLLEAVNQAFNELDHTTLSNVWLSLQYVMNEVLKVGGGNNYNVPHVNKK 458          
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Match: UPI00054005A5 (uncharacterized protein LOC104885059 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00054005A5)

HSP 1 Score: 54.7 bits (130), Expect = 8.460e-7
Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 0
Query:    2 QPSNSPNLNIMDLCFFRSLKCWVIWEWFGSVEEMVRFIKKHYEEYDETTLERARQLRFVVYNQVLRYKGGNDSSVEHTEGK 82
            QP NSP+LNI+DL FFRS++  +  +   +++ ++  + + + E D TTL         V N+VL+  GGN+ +V H   K
Sbjct:  137 QPPNSPDLNILDLGFFRSIQSLMHKKMPKNIDSLLEAVNQAFNELDHTTLSNVWLSLQYVMNEVLKVGGGNNYNVPHVNKK 217          
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Match: UPI0007EFA365 (uncharacterized protein LOC108203464 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFA365)

HSP 1 Score: 54.7 bits (130), Expect = 1.060e-6
Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 0
Query:    2 QPSNSPNLNIMDLCFFRSLKCWVIWEWFGSVEEMVRFIKKHYEEYDETTLERARQLRFVVYNQVLRYKGGNDSSVEHTEGKEEAV 86
            QP NSP+LNI+DL FFRS++  +  +    V++M+  +   Y E + TTL         V N+VL+ KG ND  V H   K+ A 
Sbjct:  230 QPPNSPDLNILDLGFFRSIQFLMHKKVPKDVDDMLEAVHHAYNELEPTTLGNVWLSYKYVMNEVLKVKGSNDYLVPHVNKKKLAA 314          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11327.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001D0245D69.290e-836.71uncharacterized protein LOC123072166 n=1 Tax=Triti... [more]
UPI001D0257F79.610e-836.71uncharacterized protein LOC123043747 n=2 Tax=Triti... [more]
A0A7S2FC44_9STRA9.800e-844.87Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
UPI00084520922.350e-735.90uncharacterized protein LOC123046124 n=1 Tax=Triti... [more]
UPI0007EFBF422.390e-738.82uncharacterized protein LOC108207092 n=1 Tax=Daucu... [more]
UPI00053FF3FD3.250e-737.04uncharacterized protein LOC104886291 n=1 Tax=Beta ... [more]
UPI0007F03AA84.440e-738.82uncharacterized protein LOC108201509 n=2 Tax=Daucu... [more]
UPI00053F56786.100e-735.80uncharacterized protein LOC104887556 n=2 Tax=Beta ... [more]
UPI00054005A58.460e-735.80uncharacterized protein LOC104885059 n=1 Tax=Beta ... [more]
UPI0007EFA3651.060e-638.82uncharacterized protein LOC108203464 n=1 Tax=Daucu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..72
e-value: 2.3E-7
score: 32.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11327contigC-tenellus_contig11327:4301..4567 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11327.1.1mRNA_C-tenellus_contig11327.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11327 4234..4646 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11327.1.1 ID=prot_C-tenellus_contig11327.1.1|Name=mRNA_C-tenellus_contig11327.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=89bp
MQPSNSPNLNIMDLCFFRSLKCWVIWEWFGSVEEMVRFIKKHYEEYDETT
LERARQLRFVVYNQVLRYKGGNDSSVEHTEGKEEAVVW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf