prot_C-tenellus_contig11265.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11265.1.1
Unique Nameprot_C-tenellus_contig11265.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length297
Homology
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Match: D8LMS0_ECTSI (SNF2-related domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS0_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 7.060e-124
Identity = 191/261 (73.18%), Postives = 220/261 (84.29%), Query Frame = 0
Query:    1 YPGHGAILADEMGLGKTVIAIALCNSVLRLCLGETKKAVVVCPSSLVRNWANEFRKWSPLGGRAVPVEQAGVVAAQLVDDFRIGSPMRYPVLIISYELYRNHGTIINATKGLGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTPMQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELAGERTRELGELSGKFVLRRTKGILSRSLPAALEVVIFCCPSPRQLSLYERCLT-SPRARALL 260
            Y G GAILADEMGLGKT  AIALC  VLR    E +KAVV+CPSSLV NWANEFRKW PLGG AV V+QAG  AAQLV DF+IG+  RYP+L+ISYELYRNHG +INAT+GLGLL+ADEGHRLKNS   KTTRALKACPA MRL+LTGTPMQNDLDEFF++ADFVNPG+LG +KSFRSR+++PIKAAWDRDA ++  EL+ ERTRELGE++ KFVLR+TK ++  SLPAALEVV+FC PS RQLSLYE C+  S  AR+LL
Sbjct:  304 YEGRGAILADEMGLGKTATAIALCTCVLRHRRAECRKAVVICPSSLVGNWANEFRKWCPLGGGAVAVDQAGAAAAQLVSDFKIGAAARYPILVISYELYRNHGKVINATEGLGLLIADEGHRLKNSAETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDANEDAAELSAERTRELGEMTEKFVLRKTKDVIRGSLPAALEVVVFCRPSARQLSLYESCIAGSAGARSLL 564          
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Match: A0A6H5JTI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI7_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 9.050e-117
Identity = 187/261 (71.65%), Postives = 216/261 (82.76%), Query Frame = 0
Query:    1 YPGHGAILADEMGLGKTVIAIALCNSVLRLCLGETKKAVVVCPSSLVRNWANEFRKWSPLGGRAVPVEQAGVVAAQLVDDFRIGSPMRYPVLIISYELYRNHGTIINATKGLGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTPMQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELAGERTRELGELSGKFVLRRTKGILSRSLPAALEVVIFCCPSPRQLSLYERCLT-SPRARALL 260
            Y G GAILADEMGLGKT  AIALC  VLR    E  KAVVVCPSSLVRNWANE +   P GG AV V+QAG  AAQLV DF+IG+  RYP+L+ISYELYRNHG +INAT+GLGLL+ADEGHRLKN+   KTTRALKACPA MRL+LTGTPMQNDLDEFF++ADFVNPG+LG +KSFRSR+++PIKAAWDRDA ++  EL+ ERTRELGE++ KFVLRRTK ++  SLPAALEVV+FC PS RQLSLY+ C+  S  AR+LL
Sbjct:  307 YEGRGAILADEMGLGKTATAIALCMCVLRHRRAECPKAVVVCPSSLVRNWANEVQSRGP-GGGAVAVDQAGAAAAQLVSDFKIGAAARYPILVISYELYRNHGKVINATEGLGLLIADEGHRLKNAAETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDANEDAAELSTERTRELGEMTEKFVLRRTKDVIRGSLPAALEVVVFCRPSTRQLSLYQSCIAGSAGARSLL 566          
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Match: A0A5A8CH06_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CH06_CAFRO)

HSP 1 Score: 233 bits (593), Expect = 8.130e-66
Identity = 135/293 (46.08%), Postives = 174/293 (59.39%), Query Frame = 0
Query:    1 YPGHGAILADEMGLGKTVIAIALCNSVLRLCLGETK---KAVVVCPSSLVRNWANEFRKWSPLGG---RAVPVEQAGVVAAQLVDDFRIGSPMRYPVLIISYELYRNHGTIIN----------------ATKG--LGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTPMQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELAGERTRELGELSGKFVLRRTKGILSRSLPAALEVVIFCCPSPRQLSLYERCLTSPRARALLDSKDTGGGS 269
            + G GA+LAD MGLGKT+ AI L  + L+  LG      KAVVVCPSSLV NW  EFRKW  LG    R + V + G  A Q V DF + S    PVLI+SYE +R +  +IN                A +G  +GLLV DEGHRLKNS GN+T  AL ACP + R++LTGTP+QN LDEF++   FVNP +LG +  FR  F  PI+   D+ A  EE  +  ER++EL  +S +F+LRRT+ IL R LP+  E  +FC P+  QL LY   L    AR    ++ + GG+
Sbjct:  252 FSGAGAVLADAMGLGKTLQAITLIYTALKQSLGGAPLATKAVVVCPSSLVANWRREFRKW--LGDQKCRPIAVTKGGKEAEQAVKDFCLSSSSVSPVLIVSYEQFRRYAGLINGGAAAAGSGASTKSGAAKRGCDVGLLVCDEGHRLKNSDGNQTIAALAACPCRRRVILTGTPIQNRLDEFYACCSFVNPDVLGPLNVFRRVFQTPIQRGRDKSASPEEQAIGAERSKELSRVSTQFILRRTQRILDRYLPSKTESCVFCRPTALQLRLYRAVLAKTSARYAASARGSAGGA 542          
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Match: A0A812VS04_9DINO (RAD54B protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VS04_9DINO)

HSP 1 Score: 219 bits (557), Expect = 3.980e-61
Identity = 129/274 (47.08%), Postives = 165/274 (60.22%), Query Frame = 0
Query:    3 GHGAILADEMGLGKTVIAIALCNSVLRLCL---GETKKAVVVCPSSLVRNWANEFRKWSPLGG---RAVPVEQAGVVAAQLVDDFRIGSPMRYPVLIISYELYRNHGTIINATKGLGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTPMQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELAGERTRELGELSGKFVLRRTKGILSRSLPAALEVVIFCCPSPRQLSLYERCLTSPRARALLD--SKDTGGG 268
            G G ILADEMGLGKT+  I L  ++L+  +   G   K ++ CPS+LV NW  EF KW  LG    +   V + G VA  +V DF  G    YPVLI+SYE+ R     + A+  +GLLV DEGHRLKNS GN+T  AL A P + ++LLTGTP+QNDL EF++M  FVNP  LGD   FR  F+KPI+   D  A   EV+LA +R  EL  ++ +FVLRRT  +L + LP   EV +F  PS  QL  Y+R L S   R +L    +  GGG
Sbjct:  667 GEGCILADEMGLGKTLQTITLVYTMLKQSVTGAGLASKVIIACPSTLVGNWKKEFGKW--LGSTRCKPAAVTKTGKVAEGVVHDFVHGRSSMYPVLILSYEMCRKFSKAL-ASARVGLLVCDEGHRLKNSSGNQTIAALAALPTRRKVLLTGTPVQNDLLEFYAMCSFVNPAELGDPTMFRRLFAKPIQDGRDTRASPAEVQLARQRADELARITSQFVLRRTNELLEKFLPPKTEVCVFVQPSQLQLEAYQRMLGSSVVRRILSRAGRAAGGG 937          
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Match: R7QM18_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM18_CHOCR)

HSP 1 Score: 211 bits (538), Expect = 1.340e-58
Identity = 124/255 (48.63%), Postives = 168/255 (65.88%), Query Frame = 0
Query:    3 GHGAILADEMGLGKTVIAIALCNSVLRLCLGET---KKAVVVCPSSLVRNWANEFRKWSPLGG-RAVPVEQAG----VVAAQLVDDFRIGSPMRYPVLIISYELYRNHGTIINATKGLGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTPMQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELAGERTRELGELSGKFVLRRTKGILSRSLPAALEVVIFCCPSPRQLSLYER 249
            G GAILADEMGLGK++ AI L  +VL+   G     +KAV+VCP+SLV+NW NE +KW  LG  R  PV  A       + + +  F  G+  R  +LIISYE++R++   +  +K +GLLV DEGHRLK+S GNKT  ALK  P + R++LTGTP+QNDL+EFF++ DFVNPG L  + SFR+ F+ PI A+ D +A +  + +   R RELG ++ +FVLRRT  IL++ LP   EV IFC    RQ + YE+
Sbjct:  252 GQGAILADEMGLGKSLQAIGLIWTVLKQHPGGNPGVRKAVIVCPASLVQNWVNEVKKW--LGDDRLEPVAVASGSSTFESKEALAAFINGNVRR--LLIISYEMFRSYAEQMYKSK-IGLLVCDEGHRLKSSQGNKTIEALKKLPCRGRVILTGTPVQNDLEEFFAVCDFVNPGCLNSLASFRTVFANPIIASRDSNASNSAMTIGDSRARELGRITSQFVLRRTSNILAKYLPPKHEVAIFCRLQQRQQTAYEK 501          
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Match: A0A196SG06_BLAHN (RAD54, DNA repair and recombination protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SG06_BLAHN)

HSP 1 Score: 210 bits (534), Expect = 2.660e-58
Identity = 123/271 (45.39%), Postives = 169/271 (62.36%), Query Frame = 0
Query:    1 YPGHGAILADEMGLGKTVIAIALCNSVLRLCLGETK---KAVVVCPSSLVRNWANEFRKWSPLGG---RAVPVEQAGVVAAQLVDDFRIGSPMRYPVLIISYELYRNHGTIINATKGLGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTPMQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELAGERTRELGELSGKFVLRRTKG-ILSRSLPAALEVVIFCCPSPRQLSLYERCLTSPRARALLDSKD 264
            + G+G ILADEMGLGKT+ AI+L  + L      T     AVV CPSSLV NW NEFRKW  LG    R + + + G  A + V+DF + S ++  VLIISYE+YR +   INA+K  GLLV DEGHRLK+S GN T  +L+  P+  R+LL+GTP+QND++E F+++ FVNP I   + SFR  F +PI+A   +DA + E +LA  R+ EL  ++ +F+LRRT   +L  SLP      +FC  SP Q +LYE  +   +   + +  D
Sbjct:  262 FNGNGCILADEMGLGKTLTAISLIFTALTQSPWATPLITSAVVTCPSSLVENWGNEFRKW--LGRDKVRCLILSEKGEKAEEKVNDFVMQSGLKRVVLIISYEMYRRYADKINASKA-GLLVCDEGHRLKSSSGNATIDSLRQFPSTRRVLLSGTPIQNDMEELFALSVFVNPAIFPSLASFRELFVRPIEAGRRKDASENERQLANMRSDELSRITEQFILRRTTAAVLRSSLPPKTTHFLFCGLSPEQKTLYESVIDLQKHTLVCNGGD 529          
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Match: A0A7L3J861_THACH (RA54B protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L3J861_THACH)

HSP 1 Score: 199 bits (507), Expect = 8.730e-58
Identity = 121/263 (46.01%), Postives = 166/263 (63.12%), Query Frame = 0
Query:    5 GAILADEMGLGKTVIAIALCNSVLRL----CLGETKKAVVVCPSSLVRNWANEFRKWSPLGGRAVPVEQAGVVAAQLVDDFRIGSPMRYPVLIISYELYRNHGTIINATKGLGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTPMQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELAGERTRELGELSGKFVLRRTKGILSRSLPAALEVVIFCCPSPRQLSLYERCLTSPRARALLDSK 263
            GAILADEMGLGKT+  IAL  ++LR     C    K+A++V P SLV+NW  EF+KW  LG   + V    V     V++F IGSP+ Y V+IISYE+       I A +   LL+ DEGHRLKNS   KTT AL +   + R++LTGTP+QNDL EF+++ +FVNPGILG + ++R  + +PI  + +  A  EE EL  +R  EL  L+G F+LRRT+ I+++ LP   E +IFC P+  QL LY + L+S   R+ L  +
Sbjct:   61 GAILADEMGLGKTLQCIALVWTLLRQGVYGCKPVLKRALIVTPGSLVKNWKKEFQKW--LGSERIKVFT--VDQDHKVEEF-IGSPL-YSVMIISYEMLLRSLDQIQAIE-FNLLICDEGHRLKNS-SIKTTTALTSLSCERRIILTGTPIQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIVRSREPSATKEEKELGEKRAAELTRLTGLFILRRTQEIINKFLPPKKESIIFCRPTALQLELYRKLLSSRVIRSCLQGR 315          
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Match: UPI000711F2D1 (DNA repair and recombination protein RAD54B n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711F2D1)

HSP 1 Score: 206 bits (523), Expect = 1.590e-57
Identity = 119/256 (46.48%), Postives = 162/256 (63.28%), Query Frame = 0
Query:    3 GHGAILADEMGLGKTVIAIALCNSVLRLCLGETK---KAVVVCPSSLVRNWANEFRKWSPLGG---RAVPVEQAGVVAAQLVDDFRIGSPMRYPVLIISYELYRNHGTIINATKGLGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTPMQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELAGERTRELGELSGKFVLRRTKGILSRS-LPAALEVVIFCCPSPRQLSLYERCL 251
            G+G ILADEMGLGKT+ AI+L  + L            AVV CPSSLV NW NEF KW  LG    R + +++ G  A + + +F + S ++  VLIISYE+YR     IN +K  GLL+ DEGHRLK+S GN T  +L   P+K R+LL+GTP+QND++E F++++FVNPGI   + SFR  F KPI+A   +     E ELA  R+ EL  ++ +F+LRRT  ++ RS LP  +   IFC  SP Q +LYE+ +
Sbjct:  177 GNGCILADEMGLGKTLTAISLIFTSLTQSPWSAPLITSAVVTCPSSLVDNWGNEFIKW--LGRDKVRCIVLKEKGSKAEEKIHEFVLQSSLKRVVLIISYEMYRKFADQINGSKA-GLLICDEGHRLKSSQGNATIDSLMQFPSKRRVLLSGTPIQNDMEELFALSEFVNPGIFASLTSFRQLFCKPIEAGRKKGCSQAEKELATMRSAELSRITEQFILRRTTALILRSALPPKVTSYIFCPLSPLQQTLYEQVI 429          
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Match: UPI0005293573 (DNA repair and recombination protein RAD54B n=2 Tax=Neognathae TaxID=8825 RepID=UPI0005293573)

HSP 1 Score: 202 bits (515), Expect = 6.580e-57
Identity = 122/263 (46.39%), Postives = 167/263 (63.50%), Query Frame = 0
Query:    5 GAILADEMGLGKTVIAIALCNSVLRL----CLGETKKAVVVCPSSLVRNWANEFRKWSPLGGRAVPVEQAGVVAAQLVDDFRIGSPMRYPVLIISYELYRNHGTIINATKGLGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTPMQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELAGERTRELGELSGKFVLRRTKGILSRSLPAALEVVIFCCPSPRQLSLYERCLTSPRARALLDSK 263
            GAILADEMGLGKT+  IAL  ++LR     C    K+A++V P SLV+NW  EF+KW  LG   + V    V     V++F IGSP+ Y VLIISYE+       I A +   LL+ DEGHRLKNS   KTT AL +   + R++LTGTP+QNDL EF+++ +FVNPGILG + ++R  + +PI  + +  A  EE EL  +R  EL  L+G F+LRRT+ ++++ LP   E +IFC P+  QL LY + L+SP  R+ L  +
Sbjct:  165 GAILADEMGLGKTLQCIALVWTLLRQGVYGCKPVLKRALIVTPGSLVKNWKKEFQKW--LGNERIKVFT--VDQDHKVEEF-IGSPL-YSVLIISYEMLLRSLDQIQAIE-FNLLICDEGHRLKNS-SIKTTTALTSLSCERRIILTGTPIQNDLQEFYALIEFVNPGILGSLSTYRKVYEEPIVKSREPSATKEEKELGEKRAVELTRLTGLFILRRTQEVINKFLPPKKESIIFCRPTALQLELYRKLLSSPVIRSCLQGR 419          
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Match: A0A835ZHK9_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK9_9STRA)

HSP 1 Score: 204 bits (520), Expect = 8.100e-57
Identity = 98/189 (51.85%), Postives = 136/189 (71.96%), Query Frame = 0
Query:   72 VVAAQLVDDFRIGSPMRYPVLIISYELYRNHGTIINATKGLGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTPMQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELAGERTRELGELSGKFVLRRTKGILSRSLPAALEVVIFCCPSPRQLSLYERCLTSPRARALL 260
            V A    +DFR+GS  RY +LIISY+L+R H   INA +GLGLL+ DEGHRLK+S G KT +AL+ACPA MRL++TGTP+QN+L+EF+++A+FV PG+LGD + FRS +++PI+   D  A    V LA +RTR+L ++ G+FVLRRTKG+ + SL    E+ +FC P+ +Q  LY  CL +    +LL
Sbjct:  347 VHALPQAEDFRMGSDQRYALLIISYDLFRAHAKTINAARGLGLLICDEGHRLKSSNGTKTMKALEACPAAMRLMITGTPVQNNLEEFYALANFVYPGVLGDAREFRSMYARPIEGGRDTGANRAMVTLAEQRTRQLSQIMGRFVLRRTKGVAASSLTPKTELTVFCTPTEQQRQLYRNCLAAAGFDSLL 535          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11265.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMS0_ECTSI7.060e-12473.18SNF2-related domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JTI7_9PHAE9.050e-11771.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5A8CH06_CAFRO8.130e-6646.08Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
A0A812VS04_9DINO3.980e-6147.08RAD54B protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
R7QM18_CHOCR1.340e-5848.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A196SG06_BLAHN2.660e-5845.39RAD54, DNA repair and recombination protein n=1 Ta... [more]
A0A7L3J861_THACH8.730e-5846.01RA54B protein (Fragment) n=2 Tax=Neognathae TaxID=... [more]
UPI000711F2D11.590e-5746.48DNA repair and recombination protein RAD54B n=1 Ta... [more]
UPI00052935736.580e-5746.39DNA repair and recombination protein RAD54B n=2 Ta... [more]
A0A835ZHK9_9STRA8.100e-5751.85SNF2 family N-terminal domain-containing protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..176
e-value: 2.3E-17
score: 73.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..168
score: 20.072
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..217
e-value: 1.4E-62
score: 212.9
IPR000330SNF2, N-terminalPFAMPF00176SNF2_Ncoord: 3..260
e-value: 1.4E-43
score: 149.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..297
NoneNo IPR availablePANTHERPTHR45629SNF2/RAD54 FAMILY MEMBERcoord: 3..261
NoneNo IPR availablePANTHERPTHR45629:SF7DNA EXCISION REPAIR PROTEIN ERCC-6-RELATEDcoord: 3..261
NoneNo IPR availableCDDcd18004DEXHc_RAD54coord: 1..218
e-value: 5.08116E-102
score: 296.505
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11265contigC-tenellus_contig11265:88..4966 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11265.1.1mRNA_C-tenellus_contig11265.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11265 88..4966 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11265.1.1 ID=prot_C-tenellus_contig11265.1.1|Name=mRNA_C-tenellus_contig11265.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=297bp
YPGHGAILADEMGLGKTVIAIALCNSVLRLCLGETKKAVVVCPSSLVRNW
ANEFRKWSPLGGRAVPVEQAGVVAAQLVDDFRIGSPMRYPVLIISYELYR
NHGTIINATKGLGLLVADEGHRLKNSVGNKTTRALKACPAKMRLLLTGTP
MQNDLDEFFSMADFVNPGILGDIKSFRSRFSKPIKAAWDRDAEDEEVELA
GERTRELGELSGKFVLRRTKGILSRSLPAALEVVIFCCPSPRQLSLYERC
LTSPRARALLDSKDTGGGSEGVRFVGEESEEEGCWDENWEEEVGDGN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase