prot_C-tenellus_contig11043.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11043.1.1
Unique Nameprot_C-tenellus_contig11043.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length514
Homology
BLAST of mRNA_C-tenellus_contig11043.1.1 vs. uniprot
Match: D8LEW9_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW9_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 2.880e-89
Identity = 227/530 (42.83%), Postives = 295/530 (55.66%), Query Frame = 0
Query:   34 TATDECHNGQWLGGSLGIRQAAERRWMWQGFTAKQFKAFAQEFPPSLEISLDEIHARVEDIKCRSCRDRLLKALDKGMTRGGFSLNKVVKLTACSSSSRTVGSEGGEDSQVSPVLISEANSANKTKPEIQEEGIKATGGS------METGRGGKVR-------------------GAL---NTLRIRAPVTQDLLKQVVGVAQAAAAVE--ADPLGEISFGRAVRDMSEGDWLLTYHPPEGAR----GAVNSAGGTGRGSLSVPMITRRQXXXXXXXXXXXE---ERDLFDQLERSAAARDKATQRCRVILSSTGVVSAQEDGLVGTGTG-------------TVAGSVQGLDWNPQFAPRLQEAESALVDWLTQLTWVLHTLTLPCTLAFLTDTRETGEGDAKGS-DFRRS----DELWTAYEETVARLLELTLEARREHLKEQPQPMTIALCFAAHNRASAAALLDRKRLELSTLHDLVARSLLSAEKRSLLQRAEEARRRWGGALVAEGFRALDELAERVLKTRLQV 508
            T  D CHNG+ L  S  IR +A ++W W G++AKQF++FAQEFPP L++  +E+  ++EDIKC +CRDRLLKAL +G+ RGGF L K+VKL AC S     G E   D    P    E  +   T P     G    GG       +  GR G V                    G++   + LRIRAPVT DLL+QV+GV Q AA V   AD  G+     A  D+   +WL TY  P+ A      A ++AGG  RG+          XXXXXXXXXX     ER+ +  +ER   ARD A + C VI +S G                            ++AG+   ++WNPQFAPRLQEAE+A+V+WLT+LT  LH LT   TLAF+ +  + GE  + GS D   S    ++LWTAYE++V R L+LTLEARRE L+EQ QPM +ALCF A NR  A+ LL RKR E++ LH      + + + R LLQRAE AR++W   L+ E   ALD+L ERVL+ RLQV
Sbjct:  130 TGGDHCHNGESLCRSPFIRSSAGKQWSWLGYSAKQFRSFAQEFPPMLDVGAEEVRLKIEDIKCSTCRDRLLKALGRGLRRGGFPLTKLVKLAACRS-----GEEEHGDQSKRP---EETCTPTSTPPAAALGGRGDAGGDGRAPVVLSNGRSGVVEXXXXXXXXXXXXXXXXNASGSILPSDRLRIRAPVTPDLLRQVIGVVQQAALVPPAADAPGKREGAAA--DLLAEEWLSTYPAPDPALLEAGEAKSNAGGGLRGTXXXXXXXXXXXXXXXXXXXXRSDSAERNPWALMERVDRARDNAFKCCGVIEASAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMAGN---MEWNPQFAPRLQEAEAAIVEWLTELTMALHGLTFQFTLAFIGE--DDGEDGSTGSSDLAESTALAEDLWTAYEDSVKRQLDLTLEARREQLREQSQPMGLALCFTAQNRVLASELLGRKRTEMAALHQATIGVMAAPKLRPLLQRAERARQKWSSLLLPEDVYALDDLVERVLRARLQV 644          
BLAST of mRNA_C-tenellus_contig11043.1.1 vs. uniprot
Match: A0A6H5KBH4_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH4_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 2.590e-86
Identity = 220/522 (42.15%), Postives = 284/522 (54.41%), Query Frame = 0
Query:   34 TATDECHNGQWLGGSLGIRQAAERRWMWQGFTAKQFKAFAQEFPPSLEISLDEIHARVEDIKCRSCRDRLLKALDKGMTRGGFSLNKVVKLTACSSSSR---------------TVGSEG--GEDSQVSPVLISEANSANKTKPEIQEEGIKATGGSMETGRGGKVRGALNTLRIRAPVTQDLLKQVVGVAQAAAAVEADPLGEISFGR--AVRDMSEGDWLLTYHPPEGA---RGAVNSAGGTGRGSLSVPMITRRQXXXXXXXXXXXE------------ERDLFDQLERSAAARDKATQRCRVILSSTGVVSAQEDGLVGTGTG---------TVAGSVQGLDWNPQFAPRLQEAESALVDWLTQLTWVLHTLTLPCTLAFLTDTRETGEGDAKGSDFRRS----DELWTAYEETVARLLELTLEARREHLKEQPQPMTIALCFAAHNRASAAALLDRKRLELSTLHDLVARSLLSAEKRSLLQRAEEARRRWGGALVAEGFRALDELAERVLKTRLQV 508
            T  D CHNG+ L  S  IR +A ++W W G++AKQF++FAQEFPP L+I  +E+  ++EDIKC +CRDRLL AL +G+ RGGF L K+VKL AC S S+                 G  G  G D +  PV+++  N  +    E Q                G +  + + LRIRAPVT DLL+QV+GV Q AA V   P  + S  R  A  D+   +WL TY  P+ A    G   S  G               XXXXXXXXXXX             ER+ +  +ER   ARD A + C VI  S                          ++AG+++   WNPQFAPRLQEAE+A+V+WLT LT  LH LT   TLAF+ +  +  +G    SD   S    ++LWTAYEE+V R LELTLEARRE L+EQ QPM +ALCF A NR  A+ LL RKR E++ LH      + + + R LLQRAE AR++W   L+ E   ALD+L ERVL+ RLQV
Sbjct:  126 TRGDHCHNGESLCRSPYIRSSAGKQWSWLGYSAKQFRSFAQEFPPMLDIGAEEVRLKIEDIKCSTCRDRLLMALGRGLRRGGFPLTKLVKLAACRSGSKRPEETCTPTSTPPAAATGGRGDPGSDGRA-PVVLT--NGQSGVGEESQXXXXXXXXXXXXXNASGNILPS-DRLRIRAPVTPDLLRQVIGVVQQAALVP--PAADASGKREGAAADLLAEEWLSTYPAPDPALLQAGEAKSNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSDSAERNPWALMERVDRARDNAMKCCGVIEDSAXXXXXXXXXXXXXXXXXXXXXXXXXSMAGNIE---WNPQFAPRLQEAEAAIVEWLTDLTMALHGLTFQFTLAFIGED-DGQDGSTGSSDLAESTALAEDLWTAYEESVKRQLELTLEARREQLREQSQPMGLALCFTAQNRVLASELLGRKRTEMNALHQATIGVMAAPKLRPLLQRAERARQKWSSLLLPEDVYALDDLVERVLRARLQV 637          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11043.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEW9_ECTSI2.880e-8942.83USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KBH4_9PHAE2.590e-8642.15USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 461..481
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11043contigC-tenellus_contig11043:670..2709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11043.1.1mRNA_C-tenellus_contig11043.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11043 670..2709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11043.1.1 ID=prot_C-tenellus_contig11043.1.1|Name=mRNA_C-tenellus_contig11043.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=514bp
GGDSRRGCDSGSSEVDRQIPVSGDRDRERDRDKTATDECHNGQWLGGSLG
IRQAAERRWMWQGFTAKQFKAFAQEFPPSLEISLDEIHARVEDIKCRSCR
DRLLKALDKGMTRGGFSLNKVVKLTACSSSSRTVGSEGGEDSQVSPVLIS
EANSANKTKPEIQEEGIKATGGSMETGRGGKVRGALNTLRIRAPVTQDLL
KQVVGVAQAAAAVEADPLGEISFGRAVRDMSEGDWLLTYHPPEGARGAVN
SAGGTGRGSLSVPMITRRQQQTRGGDGGGGEERDLFDQLERSAAARDKAT
QRCRVILSSTGVVSAQEDGLVGTGTGTVAGSVQGLDWNPQFAPRLQEAES
ALVDWLTQLTWVLHTLTLPCTLAFLTDTRETGEGDAKGSDFRRSDELWTA
YEETVARLLELTLEARREHLKEQPQPMTIALCFAAHNRASAAALLDRKRL
ELSTLHDLVARSLLSAEKRSLLQRAEEARRRWGGALVAEGFRALDELAER
VLKTRLQVTITGG*
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