prot_C-tenellus_contig11032.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11032.1.1
Unique Nameprot_C-tenellus_contig11032.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length173
Homology
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Match: A0A6H5K8F1_9PHAE (VDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8F1_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.000e-37
Identity = 71/116 (61.21%), Postives = 82/116 (70.69%), Query Frame = 0
Query:   35 WIEKYASPRWDISAPNCYRPVAGTDPLCKGYSRPNAA---QSKEIALCLLNSCQKELASCVLNPKCFANIICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCVKQRQ 147
            W+E  A  +W +        V G   L  G     A    ++KE+ LCLL+ C+  LASC+LNPKCFANIICLQTCNGRPDEG+CQIRCGDLFENE+VGKFNACAVS K CVKQRQ
Sbjct:   18 WVE--AGKKWLVGVALASSIVGGGGLLSPGAMPAFAGSPEETKEVGLCLLSECRGALASCLLNPKCFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQ 131          
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Match: A0A7S2SKA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA3_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.550e-29
Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 0
Query:   70 AAQSKEIALCLLNSCQKELASCVLNPKCFANIICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCVKQRQ 147
            A     I  C+L+SCQ ELA CV NPKC AN+ C+QTCNGRPDE  CQIRCGD+FENE VG+FNACAVS K+CV QRQ
Sbjct:   31 ALDGAAIGKCILSSCQLELAKCVSNPKCLANLACIQTCNGRPDESACQIRCGDIFENEVVGEFNACAVSQKRCVPQRQ 108          
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Match: A0A7S2FLU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLU6_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.250e-28
Identity = 50/74 (67.57%), Postives = 56/74 (75.68%), Query Frame = 0
Query:   70 AAQSKEIALCLLNSCQKELASCVLNPKCFANIICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCV 143
            +A    I  CLL SCQ ELA CV NPKC AN++C+QTCNGR DE  CQI CGDLFEN+ VG+FNACAVS K CV
Sbjct:   40 SADGAAIGKCLLKSCQLELAKCVTNPKCAANLLCIQTCNGRADEAACQIGCGDLFENDVVGEFNACAVSQKSCV 113          
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Match: A0A7S2NVR0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVR0_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.470e-25
Identity = 46/79 (58.23%), Postives = 54/79 (68.35%), Query Frame = 0
Query:   69 NAAQSKEIALCLLNSCQKELASCVLNPKCFANIICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCVKQRQ 147
            NAA   +IA CL   C  +L  C+ NP C AN+IC+ TCNGRPDE  CQI CG+ FENE VG+FN CAVS   CV Q+Q
Sbjct:  104 NAADGAKIAKCLFQKCPLQLGKCIANPNCLANVICINTCNGRPDESECQIECGNTFENEVVGEFNKCAVSDMDCVPQKQ 182          
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Match: A0A0G4HUS0_9ALVE (VDE domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HUS0_9ALVE)

HSP 1 Score: 109 bits (273), Expect = 6.500e-25
Identity = 46/77 (59.74%), Postives = 59/77 (76.62%), Query Frame = 0
Query:   70 AAQSKEIALCLLNSCQKELASCVLNPKCFANIICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCVKQR 146
            A  S ++ LCLLN C+ +LA C+ NPKC AN+IC+ TC+ RPDE  CQ+ CG+LFENE VG+FN CAVS+ KCV Q+
Sbjct:  151 ATDSAKVGLCLLNKCKLQLAQCIANPKCLANVICINTCSNRPDESECQVSCGNLFENEVVGEFNKCAVSSMKCVTQK 227          
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Match: A0A7S2EKH5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EKH5_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.380e-24
Identity = 50/92 (54.35%), Postives = 62/92 (67.39%), Query Frame = 0
Query:   55 VAGTDPLCKGYSRPNAAQSKEIALCLLNSCQKELASCVLNPKCFANIICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCVKQR 146
            ++ T P+    S   +AQ K IALCL   CQ  L  C+ NPKC AN+IC+ TCN  PDE  CQI+CGDLFEN  VG+FNACA+S + CV Q+
Sbjct:  121 ISATVPMASATS---SAQGKNIALCLFEKCQLPLLKCITNPKCLANVICINTCNNSPDEIGCQIQCGDLFENTVVGEFNACALSQQSCVPQK 209          
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Match: A0A0G4F7V7_VITBC (VDE domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F7V7_VITBC)

HSP 1 Score: 107 bits (266), Expect = 3.450e-24
Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 0
Query:   60 PLCKGYSRPN-AAQSKEIALCLLNSCQKELASCVLNPKCFANIICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCVKQR 146
            P C   + P  A    ++  CLL  C  +LA C+LNP+C A+I+CL  CN +PDE  CQ++CG+LFENE VGKFNACAVS KKCV Q+
Sbjct:   68 PFCAAPTMPAFATDPVKVGTCLLQKCNLQLAQCLLNPRCAADIVCLNLCNNKPDEAECQVKCGNLFENEVVGKFNACAVSDKKCVDQK 155          
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Match: A0A1B1Q5V0_9STRA (Violaxanthin de-epoxidase n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1B1Q5V0_9STRA)

HSP 1 Score: 106 bits (265), Expect = 7.570e-24
Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 0
Query:   70 AAQSKEIALCLLNSCQKELASCVLNPKCFANIICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCVKQRQ 147
            A  S ++  CLL +CQ ELA C+L+PKC AN+ICL TCN + DE  CQI CGDLFENE VG+FNACA+S K+CV +++
Sbjct:  106 AVDSVKVGKCLLQNCQLELARCILDPKCLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKE 183          
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Match: A0A7S2XNS0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS0_9STRA)

HSP 1 Score: 106 bits (264), Expect = 9.410e-24
Identity = 47/78 (60.26%), Postives = 56/78 (71.79%), Query Frame = 0
Query:   70 AAQSKEIALCLLNSCQKELASCVLNPKCFANIICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCVKQRQ 147
            AA    I  CLLN C+  LA C+ NPKC AN+IC+ TCNG+ DE  CQI+CGD+FEN+ VG+FN CAVS   CV QRQ
Sbjct:  118 AADGAAIGTCLLNKCKLPLAKCIANPKCLANVICINTCNGKADEMGCQIKCGDIFENDVVGEFNKCAVSDMDCVPQRQ 195          
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Match: A1KZQ7_ORYSI (RVDE1 (Fragment) n=7 Tax=Oryza TaxID=4527 RepID=A1KZQ7_ORYSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.270e-23
Identity = 45/77 (58.44%), Postives = 53/77 (68.83%), Query Frame = 0
Query:   69 NAAQSKEIALCLLNSCQKELASCVLNPKCFANIICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCVKQ 145
            +A  + +   CLL  C+ ELA C+ NP C AN+ CL TCN RPDE  CQI+CGDLFEN  V +FN CAVS KKCV Q
Sbjct:   69 DAVDALKTCTCLLKECRIELAKCIANPSCAANVACLNTCNNRPDETECQIKCGDLFENTVVDEFNECAVSHKKCVPQ 145          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11032.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8F1_9PHAE3.000e-3761.21VDE domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2SKA3_9STRA1.550e-2969.23Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FLU6_9STRA6.250e-2867.57Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2NVR0_9STRA3.470e-2558.23Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A0G4HUS0_9ALVE6.500e-2559.74VDE domain-containing protein n=1 Tax=Chromera vel... [more]
A0A7S2EKH5_9STRA2.380e-2454.35Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A0G4F7V7_VITBC3.450e-2454.55VDE domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A1B1Q5V0_9STRA7.570e-2460.26Violaxanthin de-epoxidase n=1 Tax=Nannochloropsis ... [more]
A0A7S2XNS0_9STRA9.410e-2460.26Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A1KZQ7_ORYSI1.270e-2358.44RVDE1 (Fragment) n=7 Tax=Oryza TaxID=4527 RepID=A1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010788VDE lipocalin domainPFAMPF07137VDEcoord: 78..147
e-value: 3.9E-21
score: 75.7
NoneNo IPR availablePANTHERPTHR33970:SF1VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTICcoord: 66..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
IPR044682Violaxanthin de-epoxidasePANTHERPTHR33970VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATEDcoord: 66..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11032contigC-tenellus_contig11032:1648..3532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11032.1.1mRNA_C-tenellus_contig11032.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11032 1472..3672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11032.1.1 ID=prot_C-tenellus_contig11032.1.1|Name=mRNA_C-tenellus_contig11032.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=173bp
MRCPLRRGVVAGATVVATIGTCSALISSPRLGGNWIEKYASPRWDISAPN
CYRPVAGTDPLCKGYSRPNAAQSKEIALCLLNSCQKELASCVLNPKCFAN
IICLQTCNGRPDEGFCQIRCGDLFENESVGKFNACAVSAKKCVKQRQVIC
FIFLNFLSDKMPVLQDTKKKYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010788VDE_dom
IPR044682VDE