prot_C-tenellus_contig1103.1.4 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1103.1.4
Unique Nameprot_C-tenellus_contig1103.1.4
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length1126
Homology
BLAST of mRNA_C-tenellus_contig1103.1.4 vs. uniprot
Match: D7G5E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E7_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 3.810e-52
Identity = 128/233 (54.94%), Postives = 148/233 (63.52%), Query Frame = 0
Query:  902 PVVSRVKTMDDSFLRKVSIMLKRNQVKIKKFQQLTDRFRGGLINAKGYYEQVEELFGEANVEQITGPLLGALPEKDKRKTLQDAIKKAQKNKLAATXXXXXXXXXXXXXXXGFNLFG-WGKKEPASAQSTPA--PVVAKKGSVKGASSA-------GSDPFAAVYSKLSGANLALFKARTDLYLRGGINARNYYDSLERVFGKSNMAAEVPGVLKALPANKRSLLNSVYTGLT 1124
            P+VSRVKTMDDSFL+KVS+ML+RNQ KIKKFQQLTDRFRGGLI A  YY  VEELFGE NVE+I GPLL ALPE DKRKTLQ    KAQ+ K                     +LFG WG K  A   + PA  P  AKKG                +DP+A   +K+SG +  LFK RT LY RGGINARNYYD+L  VFG   ++A++P +LKALP NKR LL  V  GL+
Sbjct:  779 PIVSRVKTMDDSFLKKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGEDNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAKNGEGESDGGGIA---------SLFGGWGGKSKADTAAKPAAAPAPAKKGXXXXXXXXXXXXXXXAADPYAFAAAKISGKDYELFKTRTTLYARGGINARNYYDTLATVFGAKGVSAQLPALLKALPQNKRKLLQDVVDGLS 1002          
BLAST of mRNA_C-tenellus_contig1103.1.4 vs. uniprot
Match: A0A6H5L7G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G1_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 1.730e-35
Identity = 141/240 (58.75%), Postives = 155/240 (64.58%), Query Frame = 0
Query:  850 SNPFGGLFGSAGSSPKRTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVVSRVKTMDDSFLRKVSIMLKRNQVKIKKFQQLTDRFRGGLINAKGYYEQVEELFGEANVEQITGPLLGALPEKDKRKTLQDAIKKAQKNKLAATXXXXXXXXXXXXXXXGFNLFGWGKKEPASAQSTPAPVVAKKGSVKGASSAGS-------DPFAAVYSKLSGANLALFKARTDLYLRGGINAR 1082
            SNPF GLFG +G S   T+A  XXXXXXXXXXXXXXX               P+VSRVKTMDDSFLRKVS+ML+RNQ KIKKFQQLTDRFRGGLI A  YY  VEELFGE NVE+I GPLL ALPE DKRKTLQ    KAQ+ K      XXXXXXXXXXXXX                       AKKGS+K  ++ G        DP+A   +KLSG +  LFKART LY+RGGINAR
Sbjct:  865 SNPFSGLFGGSGVS--GTSAKKXXXXXXXXXXXXXXX---------------PIVSRVKTMDDSFLRKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGEDNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAKNGEGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXAKKGSMKKPAAGGKXXXXXXXDPYAFAAAKLSGKDYELFKARTTLYVRGGINAR 1083          
BLAST of mRNA_C-tenellus_contig1103.1.4 vs. uniprot
Match: A0A835YR94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR94_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.920e-34
Identity = 115/222 (51.80%), Postives = 141/222 (63.51%), Query Frame = 0
Query:  908 KTMDDSFLRKVSIMLKRNQVKIKKFQQLTDRFRGGLINAKGYYEQVEELFGEANVEQITGPLLGALPEKDKRKTLQDAIKKAQKNKLAATXXXXXXXXXXXXXXXGFN----LFGWGKKEPASAQSTPAPVVAKKGSVKGASSAGSDPFAAVYSKLSGANLALFKARTDLYLRGGINARNYYDSLERVFGKS--NMAAEVPGVLKALPANKRSLLNSVYTGL 1123
            K MDD+F++ VS +L+R+Q KIK+FQ +TDRFRGGL+ A  YY  VE LFG ANV ++  PLL +LPE+DKR+ L+DA+KKA   K    XXXXXXXXXXXXXXX       LFG+            A  VAK           +DPFA    KLS AN  LF ART L+ RGGINARNYYD+LE +FGK    + A +  V+ ALPA+K  L+  VY GL
Sbjct:  860 KKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXX-AGAVAKA----------ADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGL 1070          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1103.1.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5E7_ECTSI3.810e-5254.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7G1_9PHAE1.730e-3558.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YR94_9STRA1.920e-3451.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 380..407
NoneNo IPR availableCOILSCoilCoilcoord: 979..999
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 546..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..903
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 749..775
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..1125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1103contigC-tenellus_contig1103:2144..12962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1103.1.4mRNA_C-tenellus_contig1103.1.4Choristocarpus tenellus KU2346mRNAC-tenellus_contig1103 1842..14313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1103.1.4 ID=prot_C-tenellus_contig1103.1.4|Name=mRNA_C-tenellus_contig1103.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=1126bp
MKRPFTTFGALAFISIQLDTGKAFKVSLGPQRHTVPYTGRNHGIVPPPSK
PVASQPRFDSQTMATGGVETASNDVDAQDETDMKIQTTVEEKGASIEEVN
EAEVNVDTITTSEPVRSVEKDADSTPKVAPVQPRRNEFDSVEKALEYVRQ
ISAANLEQKKVAELAKRSKAVSETETSEPPVTAPESAKSAPAKPVAARPP
ASEASVASPGDVLKPTKAVSARPEGVKAKSVAPPSTPVKREVIPPKEAEV
VKIKTPDEVKTTVGDAKGESETESAAEPAAEPAAEPAAKSTAEPAATEES
TSQLKAAASITATKKESKESSPSMFEGLFNMGSDSIEDFFGIKVKSVLVD
TTKPPPKEQPLPNLDSKKVDALIEEDGLTEVTLKGKFRELEEEAAEKERA
AKESTKGEKSSVKEATVPKPTTPKSGAAPSSPFAGLTSMFSASPKPVAKE
AAEVPRPKTTPPPPKVTKVKTLKVTSAPAPAPASVPSPSLASTPTPSSEG
PGFWESMFGTPVDDGDVNTLPEKVDSARSMPVFTPPPAPAKAPVKASVKG
EEKKTSTRAPSPEEKKAAPASTLFGMFGGSSQATKEVPPPAAKPKVAPAS
TPEPKAAPSKGGAAPSSPLAGLTSMFSMSPKPAAKKEVEVPPSKATTPTP
TKVAKAKTLKVTSAPAPAPVSSPPTPMSKGPGFWESMFAPPVDDEEVNTL
PEKVDGARAMPVFAPPPAPAKAPAAKKVSAPPAPAPKEKKAAPAPSMFSM
LGTNVSQKSSPTPSKADTQPVTPPPKTAANKAPPAGGFNLFGGMSAKKTA
PAPAPAPAPAPVVEEKKSSSFMDKLFTTSKPAPSLAPEVEPVAKPSPAPS
NPFGGLFGSAGSSPKRTAAAAAKPKPKPKPKPKPKPKPKPKPAAPVSPQP
VPVVSRVKTMDDSFLRKVSIMLKRNQVKIKKFQQLTDRFRGGLINAKGYY
EQVEELFGEANVEQITGPLLGALPEKDKRKTLQDAIKKAQKNKLAATATA
GGGGEGEGEGEGGFNLFGWGKKEPASAQSTPAPVVAKKGSVKGASSAGSD
PFAAVYSKLSGANLALFKARTDLYLRGGINARNYYDSLERVFGKSNMAAE
VPGVLKALPANKRSLLNSVYTGLTN*
back to top