prot_C-tenellus_contig10890.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10890.1.2
Unique Nameprot_C-tenellus_contig10890.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length157
Homology
BLAST of mRNA_C-tenellus_contig10890.1.2 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.040e-15
Identity = 56/158 (35.44%), Postives = 78/158 (49.37%), Query Frame = 0
Query:    3 GRNHTVVITVEH---LQPKCLKDQVPCIADGALSVIVDGDKA--GLGKVSLGGGVGVTAVNLPGECRPFWFEQYWLEKTKLSEQIGVDQSRRLVSDVPTEDWIMNETKQTLLNGILGETVHPTVNEMGEFIMTGPGAIRGEEEDYVVAGPLAMGFILH 155
            G +H++VI V     L   C     PC+ADGAL V++DGD+A    G VSLG GV ++AVNLPG CR F FE+YW E  KL    G    R+L +     +WI+ +   T ++  +         E G F      A + E   + +  P A   + H
Sbjct:   82 GSDHSIVIEVAEPHSLDSSCPAGVSPCLADGALRVLLDGDEALFAHGTVSLGLGVEISAVNLPGACRSFGFEKYW-EHKKLEYATG---GRQLRTQPSMGEWILGDPTATNMDECVEYVARAEAEEGGMF------AHQSEHASFQIVTPAATVRLSH 229          
BLAST of mRNA_C-tenellus_contig10890.1.2 vs. uniprot
Match: A0A6H5L2W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W0_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.290e-13
Identity = 52/131 (39.69%), Postives = 68/131 (51.91%), Query Frame = 0
Query:    3 GRNHTVVITV---EHLQPKCLKDQVPCIADGALSVIVDGDKAGL--GKVSLGGGVGVTAVNLPGECRPFWFEQYWLEKTKLSEQIGVDQSRRLVSDVPTE---DWIMNETKQTLLNGILGETVHPTVNEMG 125
            G +HT+VITV     L   C     PC+ADGAL+V +DG  A L  G+V  G  V ++AVNLPG CR F FE+YW  K +   + G    RRL S    +   DWI+ +   T +       V  T N +G
Sbjct:   59 GLDHTIVITVTDPHSLDSACPVGVSPCLADGALTVQLDGKHALLAPGEVLFGPQVAISAVNLPGACRSFGFEEYWERKKQEYARGG----RRLPSSTQMQAMSDWILGDPTATNMAECTEYVVEATRNGLG 185          
BLAST of mRNA_C-tenellus_contig10890.1.2 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.810e-13
Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 0
Query:    3 GRNHTVVITV---EHLQPKCLKDQVPCIADGALSVIVDGDKAGL--GKVSLGGGVGVTAVNLPGECRPFWFEQYWLEKTKLSEQIGVDQSRRLVSDVPTE---DWIMNETKQTLL----NGILGETV 117
            G +H++VITV     L   C      C+ADGAL+V +DGD A L  G+  LG GV ++AVNLPG CR F FE+YW  + K +E +     RRL +D+  +   DWI+ +   T +      +LG TV
Sbjct:  201 GLDHSLVITVTDPHSLDSACPVQGSTCLADGALTVELDGDVALLSPGEAELGPGVAISAVNLPGACRSFGFEKYW--ERKKAEYVA--SGRRLNNDLQMQEMSDWILGDPTATNMAECTEYVLGATV 323          
BLAST of mRNA_C-tenellus_contig10890.1.2 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 4.180e-12
Identity = 58/159 (36.48%), Postives = 79/159 (49.69%), Query Frame = 0
Query:    3 GRNHTVVITVEH---LQPKCLKDQVPCIADGALSVIVDGDKA--GLGKVSLGGGVGVTAVNLPGECRPFWFEQYWLEKTKLSEQIGVDQSRRLVS-DVPTEDWIMNETKQTLLNGILGETVHPTVNEMGEFIMTGPGAIRGEEEDYVVAGPLAMGFILH 155
            G +H+VVITV+    L+  C     PC+A+GALSV +DG +A    G V +   + V+ VNLPG CR F FE+YW  K     Q G    RRL S D    DWI+ +   T +     E V   V E G+    G  A + E   + +  P+A   + H
Sbjct:  118 GLDHSVVITVKDPHSLESSCPAGVTPCLANGALSVSLDGKEALSAPGVVEMAPNMKVSVVNLPGACRSFGFEKYWERKKLEYAQAG---GRRLSSKDQDMGDWILGDPTATNMAECT-EYVARHVVEGGDG---GLFAHKSEHASFQIVMPIATVRLSH 269          
BLAST of mRNA_C-tenellus_contig10890.1.2 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.390e-11
Identity = 42/110 (38.18%), Postives = 60/110 (54.55%), Query Frame = 0
Query:    3 GRNHTVVITVEH---LQPKCLKDQVPCIADGALSVIVDGDKAGL--GKVSLGGGVGVTAVNLPGECRPFWFEQYWLEKTKLSEQIGVDQSRRLVSDVPTEDWIMNETKQT 107
            G+ H+++I+V+    L   C     PC+ADG+L V++DG++  L  G V L   V V+AVN+PG CR F FE+YW  K     Q G    RRL       +WI+ +   T
Sbjct:  842 GQEHSIIISVKDPYSLDSDCSPGVSPCLADGSLIVVLDGNETLLAPGAVELASDVMVSAVNIPGACRSFGFEKYWERKKLEYAQAG---GRRLSVQQSMGEWILGDPTAT 948          
BLAST of mRNA_C-tenellus_contig10890.1.2 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 2.530e-11
Identity = 40/110 (36.36%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    3 GRNHTVVITVE---HLQPKCLKDQVPCIADGALSVIVDGDKA--GLGKVSLGGGVGVTAVNLPGECRPFWFEQYWLEKTKLSEQIGVDQSRRLVSDVPTEDWIMNETKQT 107
            G+ H+++I+V+   +L   C     PC+ADG+L V++DG++     G V L   V V+AVN+PG CR F FE+YW  K     Q G    R L+++    +WI+ +   T
Sbjct:  660 GQEHSIIISVKDPHNLDSDCPPGVSPCLADGSLIVVLDGNETLFAPGAVELAPDVKVSAVNIPGACRSFGFEKYWERKKLEYAQAG---GRGLLTEQSMGEWILGDPTAT 766          
BLAST of mRNA_C-tenellus_contig10890.1.2 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.460e-5
Identity = 30/90 (33.33%), Postives = 47/90 (52.22%), Query Frame = 0
Query:   19 CLKDQVPCIADGALSVIVDGDKAGL------GKVSLGGGVGVTAVNLPGECRPFWFEQYWLEK-TKLSEQIGVDQSRRLVSDVPTEDWIM 101
            C     PC+A+GAL ++VDGD++          V  GG + V++ NLP ECRPF  ++ W  +   +++  G    R L    P  DW++
Sbjct:   87 CSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAAMNDASG---RRSLRGHTPFADWVL 173          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10890.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L5Y7_9PHAE1.040e-1535.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2W0_9PHAE1.290e-1339.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7V7_9PHAE2.810e-1340.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRS2_9PHAE4.180e-1236.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF50_9PHAE1.390e-1138.18LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5JRC1_9PHAE2.530e-1136.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYD0_9PHAE1.460e-533.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10890contigC-tenellus_contig10890:770..2177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10890.1.2mRNA_C-tenellus_contig10890.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig10890 2..3105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10890.1.2 ID=prot_C-tenellus_contig10890.1.2|Name=mRNA_C-tenellus_contig10890.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=157bp
MMGRNHTVVITVEHLQPKCLKDQVPCIADGALSVIVDGDKAGLGKVSLGG
GVGVTAVNLPGECRPFWFEQYWLEKTKLSEQIGVDQSRRLVSDVPTEDWI
MNETKQTLLNGILGETVHPTVNEMGEFIMTGPGAIRGEEEDYVVAGPLAM
GFILHL*
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