prot_C-tenellus_contig10804.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10804.1.1
Unique Nameprot_C-tenellus_contig10804.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length53
Homology
BLAST of mRNA_C-tenellus_contig10804.1.1 vs. uniprot
Match: A0A835YW26_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW26_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 3.820e-10
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    6 LTPEDYILPEGWIVAFSKKEKRSYFFNTTTGVSVWTAPSGSKPK 49
            L P D++LP GW V  S K++R YFFN+TTG S+WT P GS PK
Sbjct: 1267 LQPHDFVLPPGWTVQRSSKQQREYFFNSTTGKSLWTPPPGSVPK 1310          
BLAST of mRNA_C-tenellus_contig10804.1.1 vs. uniprot
Match: A0A6H5K9W2_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W2_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 4.660e-9
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 KEVKKLTPEDYILPEGWIVAFSKKEKRSYFFNTTTGVSVWTAPSGSKPKHA 51
            +E K L+P DY+LP+GW+VA SK+E R YFFN     + W  P GS+ ++A
Sbjct:  859 QEQKTLSPHDYVLPDGWMVARSKRENRDYFFNRRNNSTQWHPPEGSRRRNA 909          
BLAST of mRNA_C-tenellus_contig10804.1.1 vs. uniprot
Match: D7FSB5_ECTSI (Dice1/dead/H box polypeptide, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB5_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 2.730e-7
Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    7 TPEDYILPEGWIVAFSKKEKRSYFFNTTTGVSVWTAPSGSKPKH 50
            +P DYILP+GW+VA SK+E R YFFN     + W  P GS+ ++
Sbjct: 1226 SPHDYILPDGWMVARSKRENRDYFFNKRNNSTQWHPPEGSRRRN 1269          
BLAST of mRNA_C-tenellus_contig10804.1.1 vs. uniprot
Match: A0A4D9CVW8_9STRA (WW domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVW8_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 6.270e-6
Identity = 20/31 (64.52%), Postives = 26/31 (83.87%), Query Frame = 0
Query:   15 EGWIVAFSKKEKRSYFFNTTTGVSVWTAPSG 45
            EGW++A+SK+EKR Y+FN  T V+VWTAP G
Sbjct: 1033 EGWMLAWSKREKRLYYFNIKTNVAVWTAPPG 1063          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10804.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YW26_9STRA3.820e-1059.09WW domain-containing protein n=1 Tax=Tribonema min... [more]
A0A6H5K9W2_9PHAE4.660e-949.02WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FSB5_ECTSI2.730e-750.00Dice1/dead/H box polypeptide, putative n=1 Tax=Ect... [more]
A0A4D9CVW8_9STRA6.270e-664.52WW domain-containing protein n=4 Tax=Monodopsidace... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 12..45
e-value: 2.0E-6
score: 37.3
IPR001202WW domainPFAMPF00397WWcoord: 13..43
e-value: 6.4E-10
score: 39.0
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 11..45
score: 11.526
IPR001202WW domainCDDcd00201WWcoord: 14..43
e-value: 1.77771E-4
score: 32.4998
NoneNo IPR availableGENE3D2.20.70.10coord: 9..52
e-value: 8.4E-11
score: 43.3
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 8..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10804contigC-tenellus_contig10804:939..1097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10804.1.1mRNA_C-tenellus_contig10804.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10804 939..1097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10804.1.1 ID=prot_C-tenellus_contig10804.1.1|Name=mRNA_C-tenellus_contig10804.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=53bp
KEVKKLTPEDYILPEGWIVAFSKKEKRSYFFNTTTGVSVWTAPSGSKPKH
AT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf