prot_C-tenellus_contig1080.2.3 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1080.2.3
Unique Nameprot_C-tenellus_contig1080.2.3
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length310
Homology
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Match: D8LQ38_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ38_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.800e-19
Identity = 65/181 (35.91%), Postives = 90/181 (49.72%), Query Frame = 0
Query:  120 ESAACSKDIAAGSGD-CPDVETLFILVSVLGILAGAIGLGIVLNLVSRYQRNRKKRKMKAIIVALPSYAFRSTTVAPVQASPTMA-LIEGP--GSGGIRCEEDRDQTVTVEEKAKAVGEEEEGTKVTLGLRGDSSS---CAICMTDYAAPEVVKVLPCGHNFHSSCLEPWLMDKAICPLCK 293
            + A+CS  +     D CP V    I  ++ GIL   +G+ ++LN+ +R    R+ RK+K  I  LP Y + S+T    +A+ T    ++ P   S GI   ED     +                       DS+S   CAIC+  Y   EV+KVLPCGH+FHS CL+PWL  KA CPLCK
Sbjct:    5 DDASCSSGVMLLEVDECPSVGADIIFKNITGILGAMVGVALLLNVFNRVSNRRRSRKLKKSIFTLPVYVYNSSTRERAKAARTARPQLQAPLDSSQGI---EDVGSARSSXXXXXXXXXXXXXXXXXXXXXXDSASPITCAICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCK 182          
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Match: A0A0N0PEX2_PAPXU (Protein goliath n=1 Tax=Papilio xuthus TaxID=66420 RepID=A0A0N0PEX2_PAPXU)

HSP 1 Score: 71.2 bits (173), Expect = 3.500e-11
Identity = 24/50 (48.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:  245 LRGDSSSCAICMTDYAAPEVVKVLPCGHNFHSSCLEPWLMDKAICPLCKV 294
            ++GD   CAIC+  Y   E ++ LPCGHNFH +C++PWL++   CP+CK+
Sbjct:  120 VQGDGECCAICIEPYKVSETLRSLPCGHNFHKNCIDPWLLEHRTCPMCKM 169          
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Match: A0A653C7N1_CALMS (RING-type domain-containing protein (Fragment) n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653C7N1_CALMS)

HSP 1 Score: 70.9 bits (172), Expect = 4.280e-11
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 0
Query:  245 LRGDSSSCAICMTDYAAPEVVKVLPCGHNFHSSCLEPWLMDKAICPLCKVST-RH 298
            ++GD   CAIC+  Y   + +++LPCGH FH SC++PWL++   CP+CK+   RH
Sbjct:  110 MQGDCECCAICIEPYKISDTLRILPCGHEFHKSCIDPWLLEHRTCPMCKMDILRH 164          
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Match: A0A1B6MNZ5_9HEMI (RING-type domain-containing protein (Fragment) n=3 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6MNZ5_9HEMI)

HSP 1 Score: 72.8 bits (177), Expect = 4.760e-11
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0
Query:  241 VTLGLRGDSSSCAICMTDYAAPEVVKVLPCGHNFHSSCLEPWLMDKAICPLCKV 294
            + LG +GD   CAIC+  Y   EVV++LPC H FH  C++PWL++   CP+CK+
Sbjct:  122 IKLGDKGDGECCAICIEPYRTAEVVRILPCRHEFHRGCIDPWLVEHRTCPMCKM 175          
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Match: A0A482RN29_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RN29_9ARCH)

HSP 1 Score: 69.3 bits (168), Expect = 5.790e-11
Identity = 26/47 (55.32%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  248 DSSSCAICMTDYAAPEVVKVLPCGHNFHSSCLEPWLMDKAICPLCKV 294
            D   CAIC+TD+ A E+V+ LPC H FH++C++ WL ++A+CPLCKV
Sbjct:   72 DLDRCAICLTDFQAGELVRPLPCCHFFHAACIDQWLAERAVCPLCKV 118          
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Match: A0A6G0ZAH2_APHCR (Protein goliath isoform X3 n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0ZAH2_APHCR)

HSP 1 Score: 69.3 bits (168), Expect = 6.070e-11
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query:  247 GDSSSCAICMTDYAAPEVVKVLPCGHNFHSSCLEPWLMDKAICPLCKV 294
            GD   CA+C+  Y   EVV++LPC H FH SC++PWL++   CP+CK+
Sbjct:   77 GDGDCCAVCIEPYRPSEVVRILPCRHEFHKSCVDPWLLEHRTCPMCKM 124          
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Match: UPI00094E25C3 (protein goliath-like n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=UPI00094E25C3)

HSP 1 Score: 68.6 bits (166), Expect = 8.470e-11
Identity = 22/50 (44.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  245 LRGDSSSCAICMTDYAAPEVVKVLPCGHNFHSSCLEPWLMDKAICPLCKV 294
            ++GD   CA+C+  Y   E +++LPC H FH +C++PWL+D   CP+CK+
Sbjct:   52 VQGDGECCAVCIEPYKLSETLRILPCRHEFHKNCIDPWLLDHRTCPMCKM 101          
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Match: A0A1B6JTW9_9HEMI (RING-type domain-containing protein n=14 Tax=Proconiini TaxID=565685 RepID=A0A1B6JTW9_9HEMI)

HSP 1 Score: 72.8 bits (177), Expect = 1.190e-10
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 0
Query:  241 VTLGLRGDSSSCAICMTDYAAPEVVKVLPCGHNFHSSCLEPWLMDKAICPLCKV 294
            + LG +GD   CAIC+  Y   EVV++LPC H FH  C++PWL++   CP+CK+
Sbjct:  318 IKLGDKGDGECCAICIEPYRTSEVVRILPCRHEFHRGCIDPWLVEHRTCPMCKM 371          
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Match: A0A1E5UKJ5_9POAL (RING-type E3 ubiquitin transferase n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5UKJ5_9POAL)

HSP 1 Score: 69.3 bits (168), Expect = 1.590e-10
Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 0
Query:  145 VSVLGILAGAIGLGIVLNLVSRYQRNRKKRKMKAIIVALPSYAFRSTTVAPVQASPTMALIEGPGSGGIRCEEDRDQTVTVEEKAKAVGEEEEGTKVTLGLRGDSSS---CAICMTDYAAPEVVKVLP-CGHNFHSSCLEPWLMDKAICPLCKVS 295
            V VL +L G +   + + L  R+  +R     +A   ALP Y+  S+  A    +P  A ++     G+         VT+   A A G          G   D ++   C+IC+ ++A  + VK LP CGH FH  C++PWL D+A CPLC+ S
Sbjct:   26 VPVLVVLLGVLVCFVAVCLYLRWACHRYNNDRRA---ALPRYSSSSSAAALASPAPVAAGLDDDAIAGL--------PVTLYRPAGAGG-------AGAGATADDAAQCCCSICLGEFAEGDKVKALPRCGHGFHPECVDPWLRDRASCPLCRAS 162          
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Match: UPI00054009C6 (E3 ubiquitin-protein ligase RING1 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00054009C6)

HSP 1 Score: 69.3 bits (168), Expect = 1.950e-10
Identity = 24/53 (45.28%), Postives = 41/53 (77.36%), Query Frame = 0
Query:  248 DSSSCAICMTDYAAPEVVKVLP-CGHNFHSSCLEPWLMDKAICPLCKVSTRHS 299
            + S C+IC+ +Y   EV++++P CGH+FH SC++PWLM ++ CP+C++  +HS
Sbjct:   82 EDSQCSICLGEYQEKEVLRIMPKCGHSFHLSCIDPWLMKQSTCPVCRLPLKHS 134          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1080.2.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ38_ECTSI1.800e-1935.91RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A0N0PEX2_PAPXU3.500e-1148.00Protein goliath n=1 Tax=Papilio xuthus TaxID=66420... [more]
A0A653C7N1_CALMS4.280e-1145.45RING-type domain-containing protein (Fragment) n=1... [more]
A0A1B6MNZ5_9HEMI4.760e-1148.15RING-type domain-containing protein (Fragment) n=3... [more]
A0A482RN29_9ARCH5.790e-1155.32RING-type domain-containing protein n=1 Tax=archae... [more]
A0A6G0ZAH2_APHCR6.070e-1150.00Protein goliath isoform X3 n=1 Tax=Aphis craccivor... [more]
UPI00094E25C38.470e-1144.00protein goliath-like n=1 Tax=Dendroctonus ponderos... [more]
A0A1B6JTW9_9HEMI1.190e-1048.15RING-type domain-containing protein n=14 Tax=Proco... [more]
A0A1E5UKJ5_9POAL1.590e-1031.61RING-type E3 ubiquitin transferase n=1 Tax=Dichant... [more]
UPI00054009C61.950e-1045.28E3 ubiquitin-protein ligase RING1 n=1 Tax=Beta vul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 252..292
e-value: 3.9E-9
score: 46.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 251..293
e-value: 3.4E-12
score: 46.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 252..293
score: 13.138
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 233..300
e-value: 8.6E-18
score: 65.4
NoneNo IPR availablePANTHERPTHR45798RING-H2 FINGER PROTEIN ATL61-RELATED-RELATEDcoord: 130..294
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 165..309
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..140
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 252..293
e-value: 8.79163E-17
score: 70.7937
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 251..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1080contigC-tenellus_contig1080:3127..7974 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1080.2.3mRNA_C-tenellus_contig1080.2.3Choristocarpus tenellus KU2346mRNAC-tenellus_contig1080 3007..10635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1080.2.3 ID=prot_C-tenellus_contig1080.2.3|Name=mRNA_C-tenellus_contig1080.2.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=310bp
MACSTICSNAPFWMSCRLSQSVLFLFFDALPVHTYKPFHAAKAMRKERIA
KDVVSRELVDTEGYELENSSALVVSENSDGGLGEIRNISSSCDKFVCSNC
VEDVACVWCGGIRSGQCQPESAACSKDIAAGSGDCPDVETLFILVSVLGI
LAGAIGLGIVLNLVSRYQRNRKKRKMKAIIVALPSYAFRSTTVAPVQASP
TMALIEGPGSGGIRCEEDRDQTVTVEEKAKAVGEEEEGTKVTLGLRGDSS
SCAICMTDYAAPEVVKVLPCGHNFHSSCLEPWLMDKAICPLCKVSTRHST
CSRVKCVIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD