prot_C-tenellus_contig1072.12.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1072.12.1
Unique Nameprot_C-tenellus_contig1072.12.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length51
Homology
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Match: D8LF65_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF65_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 6.300e-11
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 DLPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDLMHL 43
            +L TW GVEV+DEG VV++ LP NNL GPIPE+LG L++L HL
Sbjct:   32 ELATWAGVEVNDEGRVVQLILPDNNLHGPIPEALGTLNELTHL 74          
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Match: A0A1S1Z108_9BACT (Uncharacterized protein n=2 Tax=Flammeovirga pacifica TaxID=915059 RepID=A0A1S1Z108_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 1.090e-8
Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    1 DLPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDLMHLNFKYNILS 51
            DL  W+G+  DD G V+ I L  NNL G IPE +G LS+L H+N   N L+
Sbjct:  602 DLDNWFGITTDDNGRVIAIELDNNNLSGTIPEEIGELSELRHINVMVNYLT 652          
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 2.790e-8
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    1 DLPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDLMHLNFKYNILS 51
            DL TW+GV+V+D+G VVK+ L  NNL+G IP +LG L +L  L+   N LS
Sbjct:   32 DLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQLHLSSNKLS 82          
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Match: A0A7Y2ZMW8_9FLAO (Two component regulator three Y domain protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7Y2ZMW8_9FLAO)

HSP 1 Score: 56.2 bits (134), Expect = 6.380e-8
Identity = 23/45 (51.11%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 DLPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDLMHLNF 45
            D+ TWYG+E+++ G+V+ I+L  NNL G +PES+G+L++L H+NF
Sbjct:   50 DVETWYGIEIEN-GHVISIDLSFNNLVGQLPESIGDLNELRHINF 93          
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 7.150e-8
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    1 DLPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDLMHL 43
            ++ TW GV+V+DEG VVK+ L  NNL+GPIP  LGNLS L  L
Sbjct:   32 EIATWSGVQVNDEGRVVKLRLKSNNLRGPIPPQLGNLSFLESL 74          
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Match: D7FUH5_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH5_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 2.010e-7
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    2 LPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDLMHL 43
            L TWYGV+V+ EG VVK++L  NNL+G +P  LGNL  L HL
Sbjct:   33 LGTWYGVDVNAEGRVVKLSLYNNNLQGSLPPQLGNLGALQHL 74          
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Match: A0A6H5JFA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFA4_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 3.390e-7
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    2 LPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDL 40
            L  WYGVE +D+G VVK+ L  NNL+GPIP  LGNLS L
Sbjct:   67 LSDWYGVEANDQGRVVKLYLSSNNLRGPIPLELGNLSAL 105          
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 4.670e-7
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 DLPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDLMHLNFKYNILS 51
            DL  W+GVEV+  G VV+++L  NNL+G IPE+L  L +LM LN   N L+
Sbjct:   65 DLSKWHGVEVNQHGRVVELDLNNNNLRGTIPETLRGLKELMVLNLSCNKLT 115          
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 4.750e-7
Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 DLPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDL 40
            DL TW+GV+V+D+G VVK+ L  NNL+G IP +LG L++L
Sbjct:   32 DLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANL 71          
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Match: A0A1V6J2P6_9BACT (Thiol-disulfide oxidoreductase ResA n=1 Tax=Bacteroidetes bacterium ADurb.Bin013 TaxID=1852797 RepID=A0A1V6J2P6_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 1.200e-6
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 0
Query:    2 LPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDLMHLNFKYN 48
            L  W+G+ VD+ G+V K+ LP+NNLKG +P  +G+L  L  L   YN
Sbjct:  422 LDQWFGLTVDEHGFVTKLELPENNLKGTLPAEIGDLVKLQSLYLGYN 468          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1072.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF65_ECTSI6.300e-1165.12Hypothetical leucine-rich repeat protein n=1 Tax=E... [more]
A0A1S1Z108_9BACT1.090e-849.02Uncharacterized protein n=2 Tax=Flammeovirga pacif... [more]
D8LBY3_ECTSI2.790e-852.94Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A7Y2ZMW8_9FLAO6.380e-851.11Two component regulator three Y domain protein n=1... [more]
D8LCS7_ECTSI7.150e-860.47LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUH5_ECTSI2.010e-759.52Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5JFA4_9PHAE3.390e-764.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH89_ECTSI4.670e-750.98Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
A0A6H5JK91_9PHAE4.750e-757.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1V6J2P6_9BACT1.200e-646.81Thiol-disulfide oxidoreductase ResA n=1 Tax=Bacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..51
e-value: 7.2E-14
score: 53.0
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 15..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1072contigC-tenellus_contig1072:10047..12369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1072.12.1mRNA_C-tenellus_contig1072.12.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig1072 10045..12369 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1072.12.1 ID=prot_C-tenellus_contig1072.12.1|Name=mRNA_C-tenellus_contig1072.12.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=51bp
DLPTWYGVEVDDEGYVVKINLPKNNLKGPIPESLGNLSDLMHLNFKYNIL
S
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf