prot_C-tenellus_contig1071.2.5 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1071.2.5
Unique Nameprot_C-tenellus_contig1071.2.5
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length321
Homology
BLAST of mRNA_C-tenellus_contig1071.2.5 vs. uniprot
Match: D8LD09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD09_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 2.090e-56
Identity = 107/233 (45.92%), Postives = 134/233 (57.51%), Query Frame = 0
Query:   84 VALDFDQAIGLVHQHGRGALHAIKQGGSFLYRGEPYWDGGVNPHLQVDVSAFLVTEEPDLLDKATYGSQEAADYFMAVDNAIRRQYGASSARPSNAHIMVANREAAGQWGTACSVWPLGTTLDYAWLADCKDWWDPAWTTVETGKGSPMIQGYSEPFFWRDGARLTNFLSANLHVNEMLPQAIRSGHEVLIRAGRFQPATPFFGQGTSQ--VFTNSFICFPATLDRYVGSALG 314
            V L+   A+ LV  HGR  L  +++    LYRGE    GG             VTE+PDLLD  TYGS  AA+YF A D  + + + A  ARPSNAHIMV+N+EAA  WGTACS+WPLG +LDY+WL  C + WDP W     G  S    G  E FFWRD   +  FL+  L +N  L +AIR  HEVL+R+G F      FG    +  V  ++F+C PA+ DR V SALG
Sbjct:    3 VELELPSALALVRAHGRPLLDIVRRSSGLLYRGEALSLGGGGK----GGGPRAVTEKPDLLDAETYGSAVAAEYFRAADAIMDKDFQAP-ARPSNAHIMVSNKEAAAAWGTACSIWPLGDSLDYSWLHSCAELWDPRWE--RPGSRSSPPNGNREAFFWRDEDGMRRFLAEGLRINSGLSEAIRGRHEVLVRSGEFS-----FGSEARKGAVIQDTFVCIPASEDRAVRSALG 223          
BLAST of mRNA_C-tenellus_contig1071.2.5 vs. uniprot
Match: A0A835YZG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG2_9STRA)

HSP 1 Score: 171 bits (432), Expect = 2.220e-47
Identity = 97/234 (41.45%), Postives = 143/234 (61.11%), Query Frame = 0
Query:   84 VALDFDQAIGLVHQHGRGALHAIKQ-GGSFLYRGE--PYWDGGVNPHLQVDVSAFLVTEEPDLLDKATYGSQEAADYFMAVDNAIRRQYGASSARPSNAHIMVANREAAGQWGTACSVWPLGTTLDYAWLADCKDWWDPAWTTVETGKGSPMIQGYSEPFFWRDGARLTNFLSANLHVNEMLPQAIRSGHEVLIRAGRFQPATPFFGQGTSQVFTNSFICFPATLDRYVGSALG 314
            V L   +A+ L+   G+  L+ +K+ GG FLYRGE  P   GG +       SA L  + PDLLD +TYGS+ AA+YF A+D  + +++ A+ ARPS AHI+VAN +AA +WG ACS+WP+G+ L++ WL    + WD  W   + G GS ++ G    FFWR+   L  +L A + V++ L +AIRSGHE+LI++G  QP    + +G +    N+++  PA LD  +  ALG
Sbjct:   53 VPLTLQEAVRLILSQGQPILNGVKEAGGQFLYRGETLPAERGGAS-------SAALRVQPPDLLDTSTYGSKAAAEYFAALDAMLEKEF-AAEARPSTAHIVVANAQAAAEWGEACSIWPVGSPLEWTWLEHTFELWDKGWEQPDGG-GS-LLNGNRGAFFWREEGALHEYLEAGVIVDKGLAEAIRSGHEILIQSGPLQPP---YKRGVA----NAYVAVPARLDDALRDALG 269          
BLAST of mRNA_C-tenellus_contig1071.2.5 vs. uniprot
Match: A0A6H5KTS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTS9_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 6.450e-35
Identity = 67/137 (48.91%), Postives = 84/137 (61.31%), Query Frame = 0
Query:  182 MVANREAAGQWGTACSVWPLGTTLDYAWLADCKDWWDPAWTTVETGKGSPMIQGYSEPFFWRDGARLTNFLSANLHVNEMLPQAIRSGHEVLIRAGRFQPATPFFGQ----GTSQVFTNSFICFPATLDRYVGSALG 314
            MV+N+EAA  WGTACS+WPLG +LDY+WL  C + WDP W  +  G  S    G  E FFWRD   +  FL+  L +N  LP+AIR GHEVL+R+G F      FG     G + V   +F+C PA+ DR V SALG
Sbjct:    1 MVSNKEAAATWGTACSIWPLGDSLDYSWLDSCAELWDPRWERL--GSRSSPPNGNREAFFWRDEDGMRRFLAEGLRINSGLPEAIRCGHEVLVRSGEFS-----FGSEERTGRAAVVQGAFVCIPASEDRAVRSALG 130          
BLAST of mRNA_C-tenellus_contig1071.2.5 vs. uniprot
Match: A0A8J2SFP8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFP8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 3.660e-12
Identity = 54/167 (32.34%), Postives = 80/167 (47.90%), Query Frame = 0
Query:  103 LHAIKQGGSFLYRGEPYWDGGVNPHLQVDVSAFLVTEEPDLLDKATYGSQEAADYFMAVDNAIRRQYGASSARPSNAHIMVANREAAGQWGTACSVWPLGTTLDYAWLADCKDWWDPAWTTVETGKGSPMIQGYSEPFFWRDGARLTNFLSANLHVNEMLPQAIRSG 269
            + A+ Q G F+YRG              + S  L  +  DL   ATY S  AA YF ++D A+ +   A   R   AH+ VAN EAA QWGTA S+WPLG+ + YAW      +W      +   +   + +G ++    RDG  +     A++ V   L  ++R+G
Sbjct:   60 VRAVVQAG-FIYRGV------------AEASPTLRRDPYDLYSPATYNSARAATYFRSLDAALDK-IKAPGPRARTAHLAVANAEAAAQWGTAASIWPLGS-ISYAWGPTA--FWPTKDRAITVAESLRVDEGLADCI--RDGREVLYACDASIAVPRSLEPSLRAG 207          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1071.2.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LD09_ECTSI2.090e-5645.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YZG2_9STRA2.220e-4741.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KTS9_9PHAE6.450e-3548.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2SFP8_9STRA3.660e-1232.34Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..320
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1071contigC-tenellus_contig1071:4724..13893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1071.2.5mRNA_C-tenellus_contig1071.2.5Choristocarpus tenellus KU2346mRNAC-tenellus_contig1071 3831..14048 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1071.2.5 ID=prot_C-tenellus_contig1071.2.5|Name=mRNA_C-tenellus_contig1071.2.5|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=321bp
MNVHRAPHTPPFVSCLCLLLCLDIAYPWDIVRGGAGLTSSRSKWLKGLRL
PQVATSLILPYVALQDGKGQLNGVSAVEDENLKVALDFDQAIGLVHQHGR
GALHAIKQGGSFLYRGEPYWDGGVNPHLQVDVSAFLVTEEPDLLDKATYG
SQEAADYFMAVDNAIRRQYGASSARPSNAHIMVANREAAGQWGTACSVWP
LGTTLDYAWLADCKDWWDPAWTTVETGKGSPMIQGYSEPFFWRDGARLTN
FLSANLHVNEMLPQAIRSGHEVLIRAGRFQPATPFFGQGTSQVFTNSFIC
FPATLDRYVGSALGCQGCVQ*
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