prot_C-tenellus_contig10473.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10473.1.1
Unique Nameprot_C-tenellus_contig10473.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length369
Homology
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Match: D8LID0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID0_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 1.550e-83
Identity = 153/268 (57.09%), Postives = 188/268 (70.15%), Query Frame = 0
Query:  102 PAPLVPANMAPVPPPPRKRKVTSADIESGDTE--LVDAAHKTVMEKIQGYLKEQDSLTRFGIIALLATFFAGIMGAYVAILVLAITEGNVRYIAVCVTVTAALCWVLWKYCLTGDITRQDQSAIAQDIAQLYSTIPDHTARRGVSERGKEQFTTFRYEKSEMMFTAMTDDGVSLGSERGSELMTDGSAPQCPLCNCGYVDGDTLCLLPCQHVFHHRCINRWCRSHIVCPLCKRNLEAPEPLPMHLVSEEPLTPSGSLMSSFHSERGGG 367
            PAPLVPA +APVP      +  +AD+E+G+    L DA  KT+ME +Q YLK+QD  TR  ++ +L     G++GAYV +L  AI+E +V+Y  +    +  L WVLWKYC +GD   QDQS IAQDIA LY+ IPDHTA +GVSE+G+ QFT F+YEKSEMMFTA+TDDGVSLGSERGSELM DG+ P CPLCN  YV+G  LCLLPC HVFH  CIN+WC  HIVCPLCKR+LEA EPL  H ++     P G+ + S    RG G
Sbjct:  178 PAPLVPALLAPVPXXXXXXRA-AADVEAGEAGEVLEDAPDKTLMEMLQTYLKKQDLYTRIVLVVVLLVLAGGVLGAYVVMLWSAISEESVKYTVLVSVFSVVLFWVLWKYCFSGDQKLQDQSQIAQDIATLYAAIPDHTAVKGVSEKGRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMMDGADPSCPLCNKAYVEGAELCLLPCLHVFHKTCINKWCNRHIVCPLCKRHLEAAEPL--HTLTASYNHPGGNAVQSEPGHRGYG 442          
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Match: A0A6H5JTX8_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX8_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 1.960e-83
Identity = 149/241 (61.83%), Postives = 177/241 (73.44%), Query Frame = 0
Query:  102 PAPLVPANMAPVPPPPRKRKVTSADIESGDTE--LVDAAHKTVMEKIQGYLKEQDSLTRFGIIALLATFFAGIMGAYVAILVLAITEGNVRYIAVCVTVTAALCWVLWKYCLTGDITRQDQSAIAQDIAQLYSTIPDHTARRGVSERGKEQFTTFRYEKSEMMFTAMTDDGVSLGSERGSELMTDGSAPQCPLCNCGYVDGDTLCLLPCQHVFHHRCINRWCRSHIVCPLCKRNLEAPEPL 340
            PAPLVPA +APVP     R+  +ADIE+G+    L DA  KT+ME +Q YLK+QD  TR  ++ +L     G +GAYV +L  AI+E NV+Y  +    +  L WVLWKYC +GD   QDQS IAQDIA LY+ IPDHTA +GVSE+G+ QFT F+YEKSEMMFTA+TDDGVSLGSERGSELM DG+ P CPLCN  YV+G  LCLLPC HVFH  CIN+WC  HIVCPLCKR+LEA EPL
Sbjct:  176 PAPLVPALLAPVPXXXXXRRA-AADIEAGEAGEVLEDAPDKTLMEMLQTYLKKQDLYTRMVLVVVLLVLAGGALGAYVVMLWYAISEKNVKYTVLVSVFSVVLLWVLWKYCFSGDQKLQDQSQIAQDIATLYAAIPDHTAVKGVSEKGRAQFTDFKYEKSEMMFTAVTDDGVSLGSERGSELMMDGADPSCPLCNKVYVEGAELCLLPCLHVFHKTCINKWCNRHIVCPLCKRHLEAAEPL 415          
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Match: A0A7J9K253_9ROSI (RING-type domain-containing protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A7J9K253_9ROSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.610e-8
Identity = 35/115 (30.43%), Postives = 51/115 (44.35%), Query Frame = 0
Query:  227 IAQLYSTIPDHTARRGVSERGKEQFTTFRYEKSEMMFTAMTDDGVSLGSERG-------SELMTDGSAPQCPLCNCGYVDGDTLCLLPCQHVFHHRCINRWCRSHIVCPLCKRNL 334
            I  +  T  D +  RG +        T++++  +   TA  DD      E G        E +  G    C +C   YVD D L  LPC HVFH  C+++W + +  CPLCK  +
Sbjct:   63 IISILGTREDLSQTRGATTESINALPTYKFKSKK---TANNDDQEDSAGEGGVLAAGTEKERLISGEDAACCICLANYVDNDELRELPCDHVFHVECVDKWLKINASCPLCKSEI 174          
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Match: A0A1U8EJV5_CAPAN (E3 ubiquitin-protein ligase At4g11680-like isoform X1 n=2 Tax=Capsicum annuum TaxID=4072 RepID=A0A1U8EJV5_CAPAN)

HSP 1 Score: 64.3 bits (155), Expect = 8.050e-8
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 0
Query:  280 ELMTDGSAPQCPLCNCGYVDGDTLCLLPCQHVFHHRCINRWCRSHIVCPLCKRNL 334
            EL       +C +C   YVDG  LC+LPC H FHH CI++W R +  CPLCK N+
Sbjct:  273 ELALQPDDSECCICLYKYVDGVELCVLPCNHHFHHGCISKWLRINATCPLCKFNI 327          
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Match: A0A0D2UPI9_GOSRA (RING-type domain-containing protein n=20 Tax=Gossypium TaxID=3633 RepID=A0A0D2UPI9_GOSRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.120e-7
Identity = 35/115 (30.43%), Postives = 51/115 (44.35%), Query Frame = 0
Query:  227 IAQLYSTIPDHTARRGVSERGKEQFTTFRYEKSEMMFTAMTDDGVSLGSERG-------SELMTDGSAPQCPLCNCGYVDGDTLCLLPCQHVFHHRCINRWCRSHIVCPLCKRNL 334
            I  +  T  D +  RG +        T++++  +   TA  DD      E G        E +  G    C +C   YVD D L  LPC HVFH  C+++W + +  CPLCK  +
Sbjct:  295 IISILGTREDLSQTRGATTESINALPTYKFKSKK---TANNDDREDSAGEGGVLAAGTEKERLISGEDAACCICLANYVDNDELRELPCDHVFHVECVDKWLKINASCPLCKSEI 406          
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Match: A0A2K3NQ08_TRIPR (E3 ubiquitin-protein ligase at4g11680-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3NQ08_TRIPR)

HSP 1 Score: 60.5 bits (145), Expect = 1.860e-7
Identity = 36/120 (30.00%), Postives = 57/120 (47.50%), Query Frame = 0
Query:  236 DHTARRGVSERGKEQFTTFRYE----KSEMMFTAMTDDGVSLGSERGSELMTDGSAPQCPLCNCGYVDGDTLCLLPCQHVFHHRCINRWCRSHIVCPLCKRNLEAPEPLPMHLVSEEPLT 351
            D T  RG +        T++++    K+E   +  T +G  +      E M  G    C +C   Y + D L  LPC H+FH  C+++W + + +CPLCK ++      P  +VSEE  T
Sbjct:   20 DVTQTRGATSETINALPTYKFKTTRSKNEDESSPTTIEGGIVAEGTEKERMISGEDAVCCICILNYENEDELRELPCSHLFHKECVDKWLKINALCPLCKSDVGGD---PTRVVSEENST 136          
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Match: A0A392MC03_9FABA (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Trifolium medium TaxID=97028 RepID=A0A392MC03_9FABA)

HSP 1 Score: 60.5 bits (145), Expect = 3.030e-7
Identity = 42/151 (27.81%), Postives = 73/151 (48.34%), Query Frame = 0
Query:  187 GNVRYIAVCVTVTAALCWVLWKYCLTGDITRQDQSAIAQDIAQLYSTIPDHTARRGVSERGKEQFTTFRYEKSEMMFTAMTDDGV-SLGSERGSELMTDGSAPQCPLCNCGYVDGDTLCLLPCQHVFHHRCINRWCRSHIVCPLCKRNLEA 336
            G V    +C T+   L  ++    +  D++ Q++ A  + I    +++P +  +   +E G +Q             TA+ + G+ + G+E+  E +  G    C +C   Y D D L  LPC HVFH RC+++W + +  CPLCK  + A
Sbjct:   45 GYVMPFILCATICCCLPCIISALDIREDLS-QNRGATVESI----NSLPVYKFKVKNNENGVDQNIN----------TALEECGILAAGTEK--ERILSGKDAVCCICLAKYADNDELRELPCSHVFHVRCVDKWLKINASCPLCKSEVGA 178          
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Match: UPI001E691EE7 (E3 ubiquitin-protein ligase At1g63170-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E691EE7)

HSP 1 Score: 61.6 bits (148), Expect = 7.880e-7
Identity = 37/129 (28.68%), Postives = 58/129 (44.96%), Query Frame = 0
Query:  227 IAQLYSTIPDHTARRGVSERGKEQFTTFRYE----KSEMMFTAMTDDGVSLGSERGSELMTDGSAPQCPLCNCGYVDGDTLCLLPCQHVFHHRCINRWCRSHIVCPLCKRNLEAPEPLPMHLVSEEPLT 351
            I        D T  RG +        T++++    K+E   +  T +G  +      E M  G    C +C   Y + D L  LPC H+FH  C+++W + + +CPLCK ++      P  +VSEE  T
Sbjct:  252 IISALGVTEDVTQTRGATSETINALPTYKFKTTRSKNEDESSPTTIEGGIVAEGTEKERMISGEDAVCCICILNYENEDELRELPCSHLFHKECVDKWLKINALCPLCKSDVAGD---PTRVVSEENST 377          
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Match: A0A7N0V2Z2_KALFE (RING-type domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0V2Z2_KALFE)

HSP 1 Score: 61.6 bits (148), Expect = 1.010e-6
Identity = 43/150 (28.67%), Postives = 64/150 (42.67%), Query Frame = 0
Query:  216 TRQDQSAIAQDIAQ-----LYSTIPDHTARRGVSERGKE--QFTTFRYEKSEMMFTAMTDDGVSLGSE-RGSELMTDGSAP-------------------QCPLCNCGYVDGDTLCLLPCQHVFHHRCINRWCRSHIVCPLCKRNLEAPE 338
            +R  QS+ + ++A      L  T+P     +G S  G      T    +   M +  +   G S+G+E RG       S P                   +C +C   Y  GD L  LPC H++H  CI  W  ++ +CP+CKR+L APE
Sbjct:  369 SRGSQSSASSELASAVALSLAPTLPAAAENQGASSAGSSVSAATQESVDPDNMTYEELQSLGDSIGTESRGLSKELIASFPTQKLDAKSGWFSSQKSTPEECAICITEYEAGDELLTLPCLHLYHKPCITPWLTNNKICPMCKRDLSAPE 518          
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Match: A0A444CUI7_ENSVE (RING-type domain-containing protein n=5 Tax=Musaceae TaxID=4637 RepID=A0A444CUI7_ENSVE)

HSP 1 Score: 61.2 bits (147), Expect = 1.080e-6
Identity = 31/99 (31.31%), Postives = 49/99 (49.49%), Query Frame = 0
Query:  241 RGVSERGKEQFTTFRYE--------KSEMMFTAMTDDGVSLGSERGSELMTDGSAPQCPLCNCGYVDGDTLCLLPCQHVFHHRCINRWCRSHIVCPLCK 331
            RG +    +   T+R++        + E+   +  D G+ L +    E M  G    C +C   YVD + L  LPC HVFH  C+++W + + +CPLCK
Sbjct:  290 RGATSESIDALPTYRFKTKRRKNRGEREINLESQCDGGI-LAAGTDKERMISGEDAVCCICLAKYVDNEELRELPCSHVFHKECVDKWLKINALCPLCK 387          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10473.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LID0_ECTSI1.550e-8357.09RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JTX8_9PHAE1.960e-8361.83RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7J9K253_9ROSI1.610e-830.43RING-type domain-containing protein n=4 Tax=Gossyp... [more]
A0A1U8EJV5_CAPAN8.050e-849.09E3 ubiquitin-protein ligase At4g11680-like isoform... [more]
A0A0D2UPI9_GOSRA1.120e-730.43RING-type domain-containing protein n=20 Tax=Gossy... [more]
A0A2K3NQ08_TRIPR1.860e-730.00E3 ubiquitin-protein ligase at4g11680-like protein... [more]
A0A392MC03_9FABA3.030e-727.81E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Tri... [more]
UPI001E691EE77.880e-728.68E3 ubiquitin-protein ligase At1g63170-like n=1 Tax... [more]
A0A7N0V2Z2_KALFE1.010e-628.67RING-type domain-containing protein n=1 Tax=Kalanc... [more]
A0A444CUI7_ENSVE1.080e-631.31RING-type domain-containing protein n=5 Tax=Musace... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 290..330
e-value: 0.0013
score: 28.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 289..331
e-value: 9.9E-10
score: 38.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 290..331
score: 12.15
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 236..337
e-value: 6.7E-15
score: 56.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..93
NoneNo IPR availablePANTHERPTHR45977TARGET OF ERK KINASE MPK-1coord: 189..334
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 208..369
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..188
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 289..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10473contigC-tenellus_contig10473:3..4012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10473.1.1mRNA_C-tenellus_contig10473.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10473 3..4265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10473.1.1 ID=prot_C-tenellus_contig10473.1.1|Name=mRNA_C-tenellus_contig10473.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=369bp
MGSVKEKDQGRKNQRVKQALNPLYGSSELSKSGEMAKWSEKRNGEVKRER
TPSGEKFKASEGRNGAGSPDEADTTTSSMNSGHSLSQKARTAAVSENAVK
GPAPLVPANMAPVPPPPRKRKVTSADIESGDTELVDAAHKTVMEKIQGYL
KEQDSLTRFGIIALLATFFAGIMGAYVAILVLAITEGNVRYIAVCVTVTA
ALCWVLWKYCLTGDITRQDQSAIAQDIAQLYSTIPDHTARRGVSERGKEQ
FTTFRYEKSEMMFTAMTDDGVSLGSERGSELMTDGSAPQCPLCNCGYVDG
DTLCLLPCQHVFHHRCINRWCRSHIVCPLCKRNLEAPEPLPMHLVSEEPL
TPSGSLMSSFHSERGGGSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD