prot_C-tenellus_contig10387.1.3 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10387.1.3
Unique Nameprot_C-tenellus_contig10387.1.3
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length132
Homology
BLAST of mRNA_C-tenellus_contig10387.1.3 vs. uniprot
Match: D8LTN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN9_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 1.160e-9
Identity = 38/84 (45.24%), Postives = 59/84 (70.24%), Query Frame = 0
Query:   18 PPTDSDIVVGAGVVGAAAGLIVSGPLLALGVGAGVMGLAAAGNNKAGDVARSTGKVGVAAFKEGKKINERHHISEKVRAGLRST 101
            PP  + +V GA +VGA  GL++SGPL+A+G+GAG         ++AGDVARSTG+ G+A  ++GK+IN ++ +++KV+    ST
Sbjct:   16 PP--AGVVGGAALVGATTGLLLSGPLVAIGLGAGAAACCLR-RDQAGDVARSTGQAGLAVVEKGKEINTQYGVADKVKGAAHST 96          
BLAST of mRNA_C-tenellus_contig10387.1.3 vs. uniprot
Match: A0A7S0QJ43_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QJ43_9CRYP)

HSP 1 Score: 63.2 bits (152), Expect = 1.300e-9
Identity = 40/90 (44.44%), Postives = 54/90 (60.00%), Query Frame = 0
Query:   20 TDSDIVVGAGVVGAAAGLIVSGPLLALGVGAGVMGLAAAGNNKAGDVARSTGKVGVAAFKEGKKINERHHISEKVRAGLRSTVNKAKELD 109
            +D  +V GA V GAA G++V GPL+ L VGAG    AA   N+ GDVARS G   VA  K   K ++ H++S  ++      +NKAKEL+
Sbjct:   46 SDDQVVAGAAVAGAAVGVLVGGPLIGL-VGAGAAAYAATCENQVGDVARSAGTTTVAMGKRLAKYDKDHNVSANIKTAATGAINKAKELN 134          
BLAST of mRNA_C-tenellus_contig10387.1.3 vs. uniprot
Match: D8LTN6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN6_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.600e-9
Identity = 40/92 (43.48%), Postives = 60/92 (65.22%), Query Frame = 0
Query:   25 VVGAGVVGAAAG-LIVSGPLLALGVGAGVMGLAAAGNNKAGDVARSTGKVGVAAFKEGKKINERHHISEKVRAGLRSTVNKAKELDHEHKIV 115
            VVGAG VG  AG L+    L++ G+G   M +AA+  + AGD+ARS+G++ VAAF  G  +NER+H +E++  G + T  + K+ D EH +V
Sbjct:   60 VVGAGAVGVLAGQLVFQSLLISAGLGVTAMTIAASSADGAGDIARSSGRMAVAAFDRGADLNERYHFTERLVNGAKITGWRLKQFDQEHAVV 151          
BLAST of mRNA_C-tenellus_contig10387.1.3 vs. uniprot
Match: A0A7S1U135_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U135_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 5.180e-5
Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 0
Query:   22 SDIVVGAGVVGAAAGLIVSGPLLALGVGAGVMGLAAAGNNKAGDVARSTGKVGVAAFKEGKKINERHHISEKVRA 96
            S +V GA   GA AGL+VSGP++A+  GAG    AA  ++  GD AR+TG    A + + K+I+  + I++KV+A
Sbjct:   46 SRVVAGAAAAGAIAGLLVSGPIVAV-AGAGAAAYAATRSDAVGDAARATGAATAAGYDKAKEIDAEYKITDKVKA 119          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10387.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LTN9_ECTSI1.160e-945.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0QJ43_9CRYP1.300e-944.44Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
D8LTN6_ECTSI1.600e-943.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1U135_9STRA5.180e-542.67Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10387contigC-tenellus_contig10387:880..1958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10387.1.3mRNA_C-tenellus_contig10387.1.3Choristocarpus tenellus KU2346mRNAC-tenellus_contig10387 880..1958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10387.1.3 ID=prot_C-tenellus_contig10387.1.3|Name=mRNA_C-tenellus_contig10387.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=132bp
MEGRENAYSNDDQGTKRPPTDSDIVVGAGVVGAAAGLIVSGPLLALGVGA
GVMGLAAAGNNKAGDVARSTGKVGVAAFKEGKKINERHHISEKVRAGLRS
TVNKAKELDHEHKIVDKTKKGADKAWKSVRKV
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