prot_C-tenellus_contig10384.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10384.1.1
Unique Nameprot_C-tenellus_contig10384.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length106
Homology
BLAST of mRNA_C-tenellus_contig10384.1.1 vs. uniprot
Match: D8LDT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT6_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.970e-45
Identity = 71/104 (68.27%), Postives = 89/104 (85.58%), Query Frame = 0
Query:    2 GEKYCVDCDFRRVKWACLQCKDAFCDECSARIHGSGHRKTHSLTKYAESRKGWQTVEGRTENEPTFYYNATTAESRFEKPEELMTPEELGEHKKYLEFKEASEK 105
            GE++CVDC FR+ KW CLQCKDA C EC+ARIHGSGHRK H +  YA+S+KGWQTVEGRT+NEPT+Y+NA+T ES F+KP++LM PEEL EH ++L++KE SEK
Sbjct: 1048 GERHCVDCGFRKAKWVCLQCKDALCGECNARIHGSGHRKNHQVETYAKSKKGWQTVEGRTDNEPTYYFNASTGESTFDKPQDLMLPEELVEHLRFLKYKETSEK 1151          
BLAST of mRNA_C-tenellus_contig10384.1.1 vs. uniprot
Match: A0A8J2SF21_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SF21_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.370e-22
Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    2 GEKYCVDCDFRRVKWACLQCKDAFCDECSARIHGSGHRKTHSLTKYAESRKGWQTVEGRTENEPTFYYNATTAESRFEKPEELMTPEELGEHKKYLEFKEASE 104
            GEK+C+ C   +    C  C+D +CD+C A  H  G  K H    Y E+++GWQ + GR   E T+YYN +T E+R++KPEE M  +EL EH  +L+F+ A+E
Sbjct: 1230 GEKHCLVCGKAKASVVCKVCRDEYCDKCFAETHSHGQLKEHPTIPYLEAKQGWQKMVGRVAGEQTYYYNVSTGETRYDKPEEFMLEDELREHHNFLKFQLAAE 1332          
BLAST of mRNA_C-tenellus_contig10384.1.1 vs. uniprot
Match: A0A6H5KED0_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED0_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 8.080e-12
Identity = 46/129 (35.66%), Postives = 63/129 (48.84%), Query Frame = 0
Query:    2 GEKYCVDCDFRRVKWACLQCKDAFCDECSARIHGSGHRKTHSLTKYAESRK------------GWQTVE-------------GRTENEPTFYYNATTAESRFEKPEELMTPEELGEHKKYLEFKEASEK 105
            GEK C+DC+           +  +C  C    H       H + K A+S K            G  T               GRT+NEPT+Y+NA+T ES F+KP++LM PEEL EH ++L++KE SEK
Sbjct:   55 GEKICMDCE-----------EQVYCGRCWTMAHKEEDMAGH-VWKGADSGKMPCAASVTLEFTGVDTARTTKSRRTPSPRKAGRTDNEPTYYFNASTGESTFDKPQDLMLPEELVEHLRFLKYKETSEK 171          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10384.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDT6_ECTSI2.970e-4568.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2SF21_9STRA1.370e-2242.72Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6H5KED0_9PHAE8.080e-1235.66WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 36..102
e-value: 5.1E-8
score: 34.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 18..38
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 58..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10384contigC-tenellus_contig10384:3632..4710 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10384.1.1mRNA_C-tenellus_contig10384.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10384 3614..4710 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10384.1.1 ID=prot_C-tenellus_contig10384.1.1|Name=mRNA_C-tenellus_contig10384.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=106bp
MGEKYCVDCDFRRVKWACLQCKDAFCDECSARIHGSGHRKTHSLTKYAES
RKGWQTVEGRTENEPTFYYNATTAESRFEKPEELMTPEELGEHKKYLEFK
EASEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036020WW_dom_sf