prot_C-tenellus_contig10203.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10203.1.1
Unique Nameprot_C-tenellus_contig10203.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length361
Homology
BLAST of mRNA_C-tenellus_contig10203.1.1 vs. uniprot
Match: D7FTR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR0_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 8.260e-34
Identity = 136/446 (30.49%), Postives = 190/446 (42.60%), Query Frame = 0
Query:    6 ARLVTREQFVDAITAGYVGLPESELAVLFNFFVRP--------------SRNTAPPRVEGCGVGMDSSTFRT-----------GRRGVRKEGGL--ADWVEAVACLRVLAQSREPVKSILRGVFDIFAGAQLQEKQEGSV------------------------------HGVARGDEGRSFNNFVESPNTTTLVNAVATTSPPVLAG-----------------QRSVPLRDTVGMFSLACSNEDERHIVETVFRHRFCLELEAIQRRKQGRSTIEKIGN------------------------HRPCELATGTADGRVGEASIDASGSPLLLEGPYSPSPRTSVHPSGVRSQPSSPVHVGGMERDGNFSAVLVASTAESE--ATSLRNMGALQSGRGGWVSSGEFMEALARCPEMEEVFGKLLTARLQHQHRPTWMAPILHGGG 351
            ++L T+ QFVD IT  + G PESEL  LF FF RP              +R+  P   +  GVG ++S  RT           G RG +++ G   ADW  AVACLR+LA+ +EPVK+ + GVFD+FA A+    +                                   G+A      S    +  P +    +A A +S   + G                 +  V   +T  MF+L CSN+ ERH V T +RHRF LEL A+   ++GR+ +    N                        HRP   ++   DG+     +DA          YS +    V P+G R   + P      ER G   A L          A+ + + G  ++G    V++ EF EALARCPEM + FG  L ARL+H+HRP WMAP +  GG
Sbjct:  226 SKLATKAQFVDNITGKHEGFPESELNTLFGFFRRPMAPGPATATTFSEENRDKFPQSQQRGGVGTNNSRPRTSPGNFGRAGKSGSRGGKEKDGAQGADWTMAVACLRLLAKPKEPVKAAVLGVFDVFARARGDRMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGIAP-----SMQQGLAGPESH---SAFALSSADGIGGXXXXXXXXDGRGNSSLERNRVCFAETARMFTLVCSNDQERHAVTTTYRHRFYLELRAVM--QEGRNPLRFRNNQNNSGDGGYNSPNMVESDRCLSPPHRPRNRSS--KDGKASSLQLDA----------YSSTETPHVLPTGGRPTTAEPAK----ERPG---ARLQKGDGHGRGGASGMGSPGPEENG----VTAEEFSEALARCPEMLQAFGSQLDARLRHRHRPIWMAPFMRKGG 638          
BLAST of mRNA_C-tenellus_contig10203.1.1 vs. uniprot
Match: A0A6H5J8S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8S1_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.240e-18
Identity = 74/205 (36.10%), Postives = 96/205 (46.83%), Query Frame = 0
Query:  164 DTVGMFSLACSNEDERHIVETVFRHRFCLELEAIQRRKQGRSTIEKIGNHRPCELATGTADGRVGEASIDASGSPLLLEGPYSPSPRTSVHPSGVRSQPSS-----PVHVGGMERDGNFSAVLVASTAESEATSLRNMGALQSGRGG------------WVSSGEFMEALARCPEMEEVFGKLLTARLQHQHRPTWMAPILHGGG 351
            +T  MF+L CSN+ ERH V T +RHRFCLEL A+   ++GR  +    N            G  G  S +   S   L  P+ PS R+S        QP +       HV  +   G  +    A     E   +R     + GRGG             +++ EF EALARCPEM E FG  L ARL+H+HRP WMAP +  GG
Sbjct:  388 ETARMFTLVCSNDQERHAVTTTYRHRFCLELRAVM--QEGRDPLRFRNNQ--------NNGGDGGYDSPNMIESDRFLSPPHRPSNRSSEDGKASSLQPDAYSSTETPHV--LPTGGRPTTAKPAK----ERPGIRLQKGERHGRGGDSGMGSPGPEENGITAEEFSEALARCPEMLEAFGSQLDARLRHRHRPIWMAPFMRQGG 576          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10203.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTR0_ECTSI8.260e-3430.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8S1_9PHAE1.240e-1836.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10203contigC-tenellus_contig10203:2699..4603 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10203.1.1mRNA_C-tenellus_contig10203.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10203 269..4916 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10203.1.1 ID=prot_C-tenellus_contig10203.1.1|Name=mRNA_C-tenellus_contig10203.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=361bp
MVERGARLVTREQFVDAITAGYVGLPESELAVLFNFFVRPSRNTAPPRVE
GCGVGMDSSTFRTGRRGVRKEGGLADWVEAVACLRVLAQSREPVKSILRG
VFDIFAGAQLQEKQEGSVHGVARGDEGRSFNNFVESPNTTTLVNAVATTS
PPVLAGQRSVPLRDTVGMFSLACSNEDERHIVETVFRHRFCLELEAIQRR
KQGRSTIEKIGNHRPCELATGTADGRVGEASIDASGSPLLLEGPYSPSPR
TSVHPSGVRSQPSSPVHVGGMERDGNFSAVLVASTAESEATSLRNMGALQ
SGRGGWVSSGEFMEALARCPEMEEVFGKLLTARLQHQHRPTWMAPILHGG
GVLPMQKEWL*
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