prot_C-tenellus_contig1018.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1018.2.1
Unique Nameprot_C-tenellus_contig1018.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length72
Homology
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Match: A0A835YNH4_9STRA (RING-CH-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH4_9STRA)

HSP 1 Score: 128 bits (321), Expect = 8.710e-33
Identity = 57/72 (79.17%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 EVPECRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCELCSSPFSFTPVYSPDTPAQLPAW 72
            EV ECRVCRGEPE GR LY+PCLCSGSIMY HEDCL QWL HS KDSCELC   F+FTPVY+PD PA LPAW
Sbjct:   45 EVLECRVCRGEPELGRRLYAPCLCSGSIMYIHEDCLQQWLAHSKKDSCELCGHTFAFTPVYAPDAPALLPAW 116          
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Match: A0A6H5JWM1_9PHAE (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWM1_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 3.640e-31
Identity = 53/72 (73.61%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 EVPECRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCELCSSPFSFTPVYSPDTPAQLPAW 72
            E PECRVCRGEPE GR LY+PCLCSGSIM+THEDCLL+WLQHSGKD+CELC + F FTPVY P  P  +P +
Sbjct:   63 EPPECRVCRGEPEPGRRLYAPCLCSGSIMHTHEDCLLEWLQHSGKDTCELCGALFRFTPVYDPGAPTCVPLY 134          
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Match: D8LBR1_ECTSI (RING-CH-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR1_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.720e-30
Identity = 52/72 (72.22%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 EVPECRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCELCSSPFSFTPVYSPDTPAQLPAW 72
            E PECRVCRGEPE GR LY+PCLCSGSIM+THEDCLL+WLQHSGKD+CELC + F FTPVY    P ++P +
Sbjct:   63 EPPECRVCRGEPEPGRRLYAPCLCSGSIMHTHEDCLLEWLQHSGKDTCELCGALFRFTPVYDAGAPQRVPLY 134          
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Match: S4RAN7_PETMA (RING-CH-type domain-containing protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RAN7_PETMA)

HSP 1 Score: 103 bits (256), Expect = 4.870e-27
Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    5 CRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCELCSSPFSFTPVYSPDTPAQLP 70
            CRVCR E  + +PLY PC+C+GSI Y H+DCLLQWL+HS K+ CELC   F+FTP+YSPD P++LP
Sbjct:    5 CRVCRSEGTAEKPLYHPCVCTGSIKYIHQDCLLQWLKHSKKEYCELCKHRFAFTPIYSPDMPSRLP 70          
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Match: A0A7S2RW40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW40_9STRA)

HSP 1 Score: 111 bits (278), Expect = 5.570e-27
Identity = 47/67 (70.15%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    4 ECRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCELCSSPFSFTPVYSPDTPAQLP 70
            ECRVCRG  E GR L++PCLCSGSIMY H++CLLQWL+HSGKD CELC   F F PVY+ D P QLP
Sbjct:   16 ECRVCRGPEEEGRKLFAPCLCSGSIMYCHQECLLQWLKHSGKDRCELCGHQFQFNPVYAEDAPTQLP 82          
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Match: A0A8C2ZLW5_CYCLU (Membrane associated ring-CH-type finger 6 n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2ZLW5_CYCLU)

HSP 1 Score: 100 bits (250), Expect = 6.810e-26
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 EVPECRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCELCSSPFSFTPVYSPDTPAQLP 70
            E   CRVCR E  S +PLY PC+C+GSI + H++CL+QWL+HS K+ CELC   F+FTP+YSPD P++LP
Sbjct:    6 EADICRVCRSEGTSDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLP 75          
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Match: A0A8D3D183_SCOMX (Membrane associated ring-CH-type finger 6 n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3D183_SCOMX)

HSP 1 Score: 100 bits (250), Expect = 7.010e-26
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    1 EVPECRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCELCSSPFSFTPVYSPDTPAQLP 70
            E   CRVCR E  S +PLY PC+C+GSI + H++CL+QWL+HS K+ CELC   F+FTP+YSPD P++LP
Sbjct:    6 EADICRVCRSEGTSDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLP 75          
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Match: A0A3B3ZEJ0_9GOBI (RING-CH-type domain-containing protein n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B3ZEJ0_9GOBI)

HSP 1 Score: 100 bits (249), Expect = 1.170e-25
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 EVPECRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCELCSSPFSFTPVYSPDTPAQLP 70
            E   CRVCR E    +PLY PC+C+GSI + H++CLLQWL+HS K+ CELC   F+FTP+YSPD P++LP
Sbjct:    6 EADICRVCRSEGTQDKPLYHPCVCTGSIKFIHQECLLQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLP 75          
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Match: A0A671K843_9TELE (E3 ubiquitin-protein ligase MARCH6 n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671K843_9TELE)

HSP 1 Score: 99.4 bits (246), Expect = 3.090e-25
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 EVPECRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCELCSSPFSFTPVYSPDTPAQLP 70
            E   CRVCR E    +PLY PC+C+GSI + H++CL+QWL+HS K+ CELC   F+FTP+YSPD P++LP
Sbjct:    6 EADICRVCRSEGTQDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLP 75          
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Match: A0A672QID8_SINGR (Membrane associated ring-CH-type finger 6 n=2 Tax=Otophysi TaxID=186626 RepID=A0A672QID8_SINGR)

HSP 1 Score: 99.4 bits (246), Expect = 3.170e-25
Identity = 40/70 (57.14%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 EVPECRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCELCSSPFSFTPVYSPDTPAQLP 70
            E   CRVCR E    +PLY PC+C+GSI + H++CL+QWL+HS K+ CELC   F+FTP+YSPD P++LP
Sbjct:    6 EADICRVCRSEGTQDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPDMPSRLP 75          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1018.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNH4_9STRA8.710e-3379.17RING-CH-type domain-containing protein n=1 Tax=Tri... [more]
A0A6H5JWM1_9PHAE3.640e-3173.61RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
D8LBR1_ECTSI1.720e-3072.22RING-CH-type domain-containing protein n=1 Tax=Ect... [more]
S4RAN7_PETMA4.870e-2763.64RING-CH-type domain-containing protein n=1 Tax=Pet... [more]
A0A7S2RW40_9STRA5.570e-2770.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8C2ZLW5_CYCLU6.810e-2658.57Membrane associated ring-CH-type finger 6 n=1 Tax=... [more]
A0A8D3D183_SCOMX7.010e-2658.57Membrane associated ring-CH-type finger 6 n=1 Tax=... [more]
A0A3B3ZEJ0_9GOBI1.170e-2558.57RING-CH-type domain-containing protein n=1 Tax=Per... [more]
A0A671K843_9TELE3.090e-2557.14E3 ubiquitin-protein ligase MARCH6 n=1 Tax=Sinocyc... [more]
A0A672QID8_SINGR3.170e-2557.14Membrane associated ring-CH-type finger 6 n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 4..52
e-value: 7.9E-18
score: 75.2
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 5..51
e-value: 1.8E-15
score: 56.8
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 1..58
score: 20.933
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..64
e-value: 5.1E-21
score: 76.0
NoneNo IPR availablePANTHERPTHR13145SSM4 PROTEINcoord: 4..71
NoneNo IPR availableCDDcd16702RING_CH-C4HC3_MARCH6coord: 4..51
e-value: 9.81529E-24
score: 82.3116
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 3..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1018contigC-tenellus_contig1018:13121..13735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1018.2.1mRNA_C-tenellus_contig1018.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig1018 13121..13735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1018.2.1 ID=prot_C-tenellus_contig1018.2.1|Name=mRNA_C-tenellus_contig1018.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=72bp
EVPECRVCRGEPESGRPLYSPCLCSGSIMYTHEDCLLQWLQHSGKDSCEL
CSSPFSFTPVYSPDTPAQLPAW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD