prot_C-tenellus_contig10176.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10176.1.1
Unique Nameprot_C-tenellus_contig10176.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length88
Homology
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Match: D8LNC2_ECTSI (COP9 signalosome complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNC2_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 1.390e-29
Identity = 61/95 (64.21%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    5 QDFERILKTHHASFMGDPFIRGHMDDLLRTMRTQ------------VVLEAIAPYTRITLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV 87
            +DFERILKTH AS MGDPFI+ ++DD+LRTMRTQ            V+L+AIAPYTR+ L +LA ELNDIP  +VEDLLVS I++GKVDGK+DQV
Sbjct:  352 KDFERILKTHRASLMGDPFIKLYIDDILRTMRTQKVSIMSNNTHFQVLLKAIAPYTRVKLPYLAGELNDIPVTDVEDLLVSCILDGKVDGKIDQV 446          
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Match: A0A7S2V1L2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1L2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 5.990e-26
Identity = 47/81 (58.02%), Postives = 67/81 (82.72%), Query Frame = 0
Query:    7 FERILKTHHASFMGDPFIRGHMDDLLRTMRTQVVLEAIAPYTRITLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV 87
            FERILK+H  S M D FI+ ++DDL +T+ T+V+++ I PYTR+++SH+A ELN+IPE EVE LLV+LI++GK+ GK+DQV
Sbjct:   92 FERILKSHSHSLMSDSFIKAYIDDLRQTICTKVLVKVIGPYTRVSISHMASELNNIPETEVEALLVALILDGKIQGKIDQV 172          
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Match: A0A7R9WPC4_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WPC4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 7.150e-26
Identity = 49/82 (59.76%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    6 DFERILKTHHASFMGDPFIRGHMDDLLRTMRTQVVLEAIAPYTRITLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV 87
            DFE+IL+ +    M D FIR H++DLLRT+RTQV+   I PYTRI+LS +++ELNDIP E+VE LL+SLI+NG ++GK+DQV
Sbjct:   89 DFEKILRRNRGRIMKDEFIREHIEDLLRTIRTQVLRRTIRPYTRISLSAISKELNDIPVEDVESLLISLILNGSLNGKLDQV 170          
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Match: A0A367JKE9_RHIAZ (COP9 signalosome complex subunit 2 n=1 Tax=Rhizopus azygosporus TaxID=86630 RepID=A0A367JKE9_RHIAZ)

HSP 1 Score: 102 bits (254), Expect = 7.940e-26
Identity = 46/82 (56.10%), Postives = 69/82 (84.15%), Query Frame = 0
Query:    6 DFERILKTHHASFMGDPFIRGHMDDLLRTMRTQVVLEAIAPYTRITLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV 87
            +FE+ILK +H + MGDPFIR ++DD+LR +RTQVV++ I PYTRI ++ ++++LN IPE+EVE+LLV LI++ ++ GK+DQV
Sbjct:   41 EFEQILKANHNAIMGDPFIRAYIDDVLRNIRTQVVIKLIKPYTRIDINFISKQLN-IPEDEVEELLVGLILDDRISGKIDQV 121          
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Match: A0A7S2S7L9_9STRA (COP9 signalosome complex subunit 2 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S7L9_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.290e-24
Identity = 46/83 (55.42%), Postives = 66/83 (79.52%), Query Frame = 0
Query:    5 QDFERILKTHHASFMGDPFIRGHMDDLLRTMRTQVVLEAIAPYTRITLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV 87
            + FERIL+ +    M D FIR H+ DLLRT+RTQV+ + IAPY RITL+ ++ +LN IP ++VE+LLV+LI++GK+DG++DQV
Sbjct:   58 EKFERILQRNEGQIMDDEFIREHLADLLRTIRTQVLRKIIAPYKRITLTAISTKLNGIPVDDVENLLVALILDGKLDGRIDQV 140          
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Match: A0A7S3W5Y9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W5Y9_9SPIT)

HSP 1 Score: 103 bits (256), Expect = 4.830e-24
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0
Query:    5 QDFERILKTHHASFMGDPFIRGHMDDLLRTMRTQVVLEAIAPYTRITLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV 87
            ++FE++LK H AS MGD FI+ ++DDLL+ +RTQV+L  I PYTRI LS +A ELN IP  EVEDLLVSLI++G +DG VDQ+
Sbjct:  315 REFEKVLKQHSASVMGDAFIKLYLDDLLKNIRTQVLLRVIRPYTRIRLSFIATELN-IPLNEVEDLLVSLILDGHIDGHVDQI 396          
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Match: A0A167R3L1_PHYB8 (COP9 signalosome complex subunit 2 n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167R3L1_PHYB8)

HSP 1 Score: 102 bits (255), Expect = 7.110e-24
Identity = 48/83 (57.83%), Postives = 69/83 (83.13%), Query Frame = 0
Query:    5 QDFERILKTHHASFMGDPFIRGHMDDLLRTMRTQVVLEAIAPYTRITLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV 87
            ++FE+ILKT+H S MGDPFIR ++DD+L+ +RTQV+++ I PYTRI L  ++++LN IP EEVE+LLV LI+N K+ G++DQV
Sbjct:  324 REFEKILKTNHNSIMGDPFIRTYIDDVLKNIRTQVLIKLIKPYTRIELGFISKQLN-IPVEEVEELLVGLILNEKIAGRIDQV 405          
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Match: A0A7S2I382_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I382_9STRA)

HSP 1 Score: 100 bits (248), Expect = 7.440e-23
Identity = 47/83 (56.63%), Postives = 65/83 (78.31%), Query Frame = 0
Query:    5 QDFERILKTHHASFMGDPFIRGHMDDLLRTMRTQVVLEAIAPYTRITLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV 87
            +DFE IL+ +    M D F+R H+ DLLRT+RTQV+ + I PYTRI++S +A+ELN IP  +VE LLVSLI++GK+DG++DQV
Sbjct:  242 KDFEGILQRNEGKIMDDEFVREHVSDLLRTIRTQVLRKVIGPYTRISVSAIARELNYIPVSDVESLLVSLILDGKLDGRIDQV 324          
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Match: A0A4P9XX41_9FUNG (COP9 signalosome complex subunit 2 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XX41_9FUNG)

HSP 1 Score: 99.0 bits (245), Expect = 1.830e-22
Identity = 47/87 (54.02%), Postives = 65/87 (74.71%), Query Frame = 0
Query:    1 HSLTQDFERILKTHHASFMGDPFIRGHMDDLLRTMRTQVVLEAIAPYTRITLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV 87
            H    +FERIL  +  S MGDPFI  ++ D+LRT+RTQV+LE I PYTRI +  +AQ+LN I   EVE+LL+ L+++GK+DG++DQV
Sbjct:  318 HKEIHEFERILSKNKESIMGDPFIEEYIADVLRTIRTQVLLELIRPYTRIDIGSIAQQLN-ITSNEVEELLIGLVLDGKIDGRIDQV 403          
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Match: A0A7J9J6P9_9ROSI (PCI domain-containing protein n=6 Tax=rosids TaxID=71275 RepID=A0A7J9J6P9_9ROSI)

HSP 1 Score: 95.5 bits (236), Expect = 2.190e-22
Identity = 43/82 (52.44%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    6 DFERILKTHHASFMGDPFIRGHMDDLLRTMRTQVVLEAIAPYTRITLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV 87
            +FE+ILK++  + M DPFIR +++DLL+ +RTQV+L+ I PYTRI +  +++ELN +PE++VE LLVSLI++ ++DG +DQV
Sbjct:  112 EFEKILKSNRRTIMDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISKELN-VPEKDVEQLLVSLILDNRIDGHIDQV 192          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10176.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNC2_ECTSI1.390e-2964.21COP9 signalosome complex subunit 2 n=2 Tax=Ectocar... [more]
A0A7S2V1L2_9STRA5.990e-2658.02COP9 signalosome complex subunit 2 n=1 Tax=Fibroca... [more]
A0A7R9WPC4_9STRA7.150e-2659.76COP9 signalosome complex subunit 2 n=1 Tax=Crasped... [more]
A0A367JKE9_RHIAZ7.940e-2656.10COP9 signalosome complex subunit 2 n=1 Tax=Rhizopu... [more]
A0A7S2S7L9_9STRA3.290e-2455.42COP9 signalosome complex subunit 2 (Fragment) n=1 ... [more]
A0A7S3W5Y9_9SPIT4.830e-2461.45Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A167R3L1_PHYB87.110e-2457.83COP9 signalosome complex subunit 2 n=1 Tax=Phycomy... [more]
A0A7S2I382_9STRA7.440e-2356.63COP9 signalosome complex subunit 2 n=1 Tax=Helicot... [more]
A0A4P9XX41_9FUNG1.830e-2254.02COP9 signalosome complex subunit 2 n=1 Tax=Thamnoc... [more]
A0A7J9J6P9_9ROSI2.190e-2252.44PCI domain-containing protein n=6 Tax=rosids TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 5..87
e-value: 4.3E-17
score: 62.5
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 1..87
score: 19.574
NoneNo IPR availableGENE3D1.25.40.570coord: 1..87
e-value: 5.4E-28
score: 100.1
NoneNo IPR availablePANTHERPTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 5..87
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 20..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10176contigC-tenellus_contig10176:143..406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10176.1.1mRNA_C-tenellus_contig10176.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10176 143..406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10176.1.1 ID=prot_C-tenellus_contig10176.1.1|Name=mRNA_C-tenellus_contig10176.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=88bp
HSLTQDFERILKTHHASFMGDPFIRGHMDDLLRTMRTQVVLEAIAPYTRI
TLSHLAQELNDIPEEEVEDLLVSLIINGKVDGKVDQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR036390WH_DNA-bd_sf