prot_C-tenellus_contig1017.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1017.3.1
Unique Nameprot_C-tenellus_contig1017.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length234
Homology
[Close]
BLAST of mRNA_C-tenellus_contig1017.3.1 vs. uniprot
Match: D8LP10_ECTSI (SHSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP10_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 5.050e-15
Identity = 72/224 (32.14%), Postives = 106/224 (47.32%), Query Frame = 0 
Query:   52 ERRP--PRSIMDAFDQEFEDLEKLMWGDASSPFGFPGRVFFPTKEEVAKRFKDAREKGAAR------------------VKAINRTSMAVNVS-EKDDDTYLIRVDLPEGATRKDVKLTILPGQTLLKISFSPMTEVSSVGRFRFGGS-----KTVRLPRDADVTTITARFEAEDVKTEEAGVEDG----------------VSAVEVMVSKAQRLDPIQINIL 233
            E RP  P S  +A DQEF +  K MWG+         R+  PT+EE+A++   ARE  A R                  V A+ R +MA ++S  +D  +Y++R  LPEG TR+DVKLT+ P +++ +++ S  +                  K V LP+DA ++ I+A+FEAE    E+   E+G                V+ VEV V KA    P  + IL
Sbjct:  294 EPRPSRPASPFEAVDQEFREFAKAMWGEDVLE-----RLQVPTQEELAEQAAMAREAWAKREAXXXXXXXXXXXXXXXRVLAMRRATMAADISLSEDGSSYVVRFALPEGTTREDVKLTVNPSKSI-RVAVSATSXXXXXXXXXXXXPDRSVYKDVALPKDAILSEISAKFEAEQHPDEKGNAEEGGEKATAGGGGATKEGAVAGVEVTVGKASPPQPKNVEIL 511
[Close]
BLAST of mRNA_C-tenellus_contig1017.3.1 vs. uniprot
Match: A0A6H5L316_9PHAE (SHSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L316_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 7.830e-14
Identity = 69/219 (31.51%), Postives = 103/219 (47.03%), Query Frame = 0 
Query:   52 ERRPPRSIM--DAFDQEFEDLEKLMWGDASSPFGFPGRVFFPTKEEVAKRFKDAREKGAAR------------------VKAINRTSMAVNVS-EKDDDTYLIRVDLPEGATRKDVKLTILPGQTLLKISFSPMTEVSSVGRFRFGGSKTVRLPRDADVTTITARFEAEDVKTEEAGVED----------------GVSAVEVMVSKAQRLDPIQINIL 233
            E RP R     +A DQEF +  K MWG+         R+  PT+EE+A++   ARE    R                  V A+ R +MA N+S  ++  +Y++R  LPEG TR+DVKLT+ P  ++     +  T  +   R  +   K V LP+DA ++ I+A+FEAE  +  +  +E+                 V+ VEV V KA    P  + IL
Sbjct:  298 EPRPSRPTFPFEAVDQEFREFAKAMWGEHVLE-----RLQVPTQEELAEQAAMAREAWTKRXXXXXXXXXXXXXXXXKRVLAMRRATMAANISLSEEGSSYVVRFALPEGTTREDVKLTVNPSNSIRVAVSARSTAAAGPDRPVY---KDVVLPKDAILSEISAKFEAEQHRDGKGTIEEEGEEATAGGGGATKEGAVAGVEVTVGKASPPQPKHVEIL 508
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1017.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP10_ECTSI5.050e-1532.14SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L316_9PHAE7.830e-1431.51SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 113..202
e-value: 4.6E-7
score: 31.7
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 117..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 122..197
e-value: 1.4055E-6
score: 43.3117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1017contigC-tenellus_contig1017:7216..8690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1017.3.1mRNA_C-tenellus_contig1017.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig1017 6910..9979 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1017.3.1 ID=prot_C-tenellus_contig1017.3.1|Name=mRNA_C-tenellus_contig1017.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=234bp
METEIITSETSKAGGNGEVDGEQPDRHANIGRSKESWSGSAEYLSNLSST
EERRPPRSIMDAFDQEFEDLEKLMWGDASSPFGFPGRVFFPTKEEVAKRF
KDAREKGAARVKAINRTSMAVNVSEKDDDTYLIRVDLPEGATRKDVKLTI
LPGQTLLKISFSPMTEVSSVGRFRFGGSKTVRLPRDADVTTITARFEAED
VKTEEAGVEDGVSAVEVMVSKAQRLDPIQINIL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone