prot_C-tenellus_contig10167.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10167.1.1
Unique Nameprot_C-tenellus_contig10167.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length50
Homology
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Match: A0A0P1A982_PLAHL (Gag-pol polyprotein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A982_PLAHL)

HSP 1 Score: 53.9 bits (128), Expect = 4.410e-7
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    1 MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYL 40
            M+AA+ TRPD+A AV EVAK+   P  +HW A RRV EYL
Sbjct:  167 MYAAICTRPDVAHAVGEVAKFCEMPNKSHWLAARRVLEYL 206          
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Match: A0A6H5JGZ8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGZ8_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 6.070e-7
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    1 MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYLNTSKCWIG 48
            MW A  TRPDIA+AVR VA+Y +SPK  HW A   V  Y+ T+  W+G
Sbjct:  205 MWMATQTRPDIANAVRAVARYCASPKMVHWKATLGVLGYVWTTS-WMG 251          
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Match: A0A6H5K1X1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X1_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 8.310e-7
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYLNTSKCWIG 48
            MW A  TRPDIA+AVR VA+Y +SPK  HW A   +  Y+  +  W+G
Sbjct:  204 MWLATQTRPDIANAVRAVARYCASPKMVHWTAALGILGYVRRTS-WMG 250          
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Match: A0A6H5K5Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y3_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 8.350e-7
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    1 MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYLNTSKCWIG 48
            MW A  TRPDIA+AVR VA+Y +SPK  HW A   +  Y+  ++ W+G
Sbjct:  713 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTR-WMG 759          
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Match: A0A0C3PD59_PHLGI (Uncharacterized protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3PD59_PHLGI)

HSP 1 Score: 53.1 bits (126), Expect = 8.370e-7
Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    1 MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYLNTSK 44
            M+AAV TRPDIA AV ++A+YS +P   HW A++RVF YL +++
Sbjct: 1096 MYAAVGTRPDIAYAVFQLARYSENPGITHWTALKRVFAYLKSTR 1139          
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Match: A0A6H5JMV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV5_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.360e-6
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYLNTSKCWIG 48
            MW A  TRPDIA+AVR VA+Y +SPK  HW A   +  Y+  +  W+G
Sbjct:   65 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTS-WMG 111          
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.500e-6
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYLNTSKCWIG 48
            MW A  TRPDIA+AVR VA+Y +SPK  HW A   +  Y+  +  W+G
Sbjct:   80 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTS-WMG 126          
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.510e-6
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYLNTSKCWIG 48
            MW A  TRPDIA+AVR VA+Y +SPK  HW A   +  Y+  +  W+G
Sbjct:  108 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTS-WMG 154          
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.550e-6
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYLNTSKCWIG 48
            MW A  TRPDIA+AVR VA+Y +SPK  HW A   +  Y+  +  W+G
Sbjct:  163 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTS-WMG 209          
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Match: A0A6H5JSA7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSA7_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.550e-6
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYLNTSKCWIG 48
            MW A  TRPDIA+AVR VA+Y +SPK  HW A   +  Y+  +  W+G
Sbjct:  265 MWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTS-WMG 311          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10167.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P1A982_PLAHL4.410e-760.00Gag-pol polyprotein n=1 Tax=Plasmopara halstedii T... [more]
A0A6H5JGZ8_9PHAE6.070e-754.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1X1_9PHAE8.310e-750.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5Y3_9PHAE8.350e-750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0C3PD59_PHLGI8.370e-754.55Uncharacterized protein n=1 Tax=Phlebiopsis gigant... [more]
A0A6H5JMV5_9PHAE1.360e-650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8K2_9PHAE1.500e-650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE1.510e-650.00Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.550e-650.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JSA7_9PHAE1.550e-650.00Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10167contigC-tenellus_contig10167:378..527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10167.1.1mRNA_C-tenellus_contig10167.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10167 378..612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10167.1.1 ID=prot_C-tenellus_contig10167.1.1|Name=mRNA_C-tenellus_contig10167.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=50bp
MWAAVMTRPDIADAVREVAKYSSSPKTAHWCAVRRVFEYLNTSKCWIGF*
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