prot_C-tenellus_contig10157.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10157.1.1
Unique Nameprot_C-tenellus_contig10157.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length106
Homology
BLAST of mRNA_C-tenellus_contig10157.1.1 vs. uniprot
Match: D8LE11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE11_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 1.480e-40
Identity = 79/105 (75.24%), Postives = 88/105 (83.81%), Query Frame = 0
Query:    1 MYHPRATRKSQRTSISHASRETRFAAVKAALRKQSLTFEPYSNEVIRALWDELQDRHSRGIHCMLRKGLQNALLERLAGPLDDGRMSKNKVNKIFQVVQSSVVFL 105
            M+  R +RK QR S++HASRE RFAAVKAALRKQSLTFEPYS EVI ALW ELQDRH++G++CMLRKGLQNALL RLA PLD GRMSKNKVNKIFQV+  S   L
Sbjct:    1 MHQARGSRKGQRFSMTHASRENRFAAVKAALRKQSLTFEPYSEEVIHALWGELQDRHAQGVYCMLRKGLQNALLVRLARPLDGGRMSKNKVNKIFQVLIRSCFVL 105          
BLAST of mRNA_C-tenellus_contig10157.1.1 vs. uniprot
Match: A0A836C8Z0_9STRA (C3H1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z0_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.070e-8
Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 0
Query:   23 RFAAVKAALRKQSLTFEPYSNEVIRALWDELQDR-HSRGIHCMLRKGLQNALLERLAGPLDDGRMSKNKVN 92
            +FAAV+AALRKQSLT EPYS  V   LW  +Q R  + G   + RK LQ+ L++ LA  LD   MSKNK++
Sbjct:   29 KFAAVRAALRKQSLTHEPYSEFVATELWQCVQRRVEAYGTTKVHRKQLQSELIQALAPYLDKNEMSKNKLS 99          
BLAST of mRNA_C-tenellus_contig10157.1.1 vs. uniprot
Match: A0A6H5L6J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J3_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.620e-8
Identity = 32/42 (76.19%), Postives = 34/42 (80.95%), Query Frame = 0
Query:   64 MLRKGLQNALLERLAGPLDDGRMSKNKVNKIFQVVQSSVVFL 105
            MLRKGLQNALL RLA PL+ GRMSKNKVNKIFQV+  S   L
Sbjct:    1 MLRKGLQNALLVRLARPLNGGRMSKNKVNKIFQVLIRSCFVL 42          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10157.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LE11_ECTSI1.480e-4075.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8Z0_9STRA2.070e-852.11C3H1-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5L6J3_9PHAE3.620e-876.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10157contigC-tenellus_contig10157:549..2401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10157.1.1mRNA_C-tenellus_contig10157.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10157 549..2401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10157.1.1 ID=prot_C-tenellus_contig10157.1.1|Name=mRNA_C-tenellus_contig10157.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=106bp
MYHPRATRKSQRTSISHASRETRFAAVKAALRKQSLTFEPYSNEVIRALW
DELQDRHSRGIHCMLRKGLQNALLERLAGPLDDGRMSKNKVNKIFQVVQS
SVVFL*
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