prot_C-tenellus_contig1002.1.4 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1002.1.4
Unique Nameprot_C-tenellus_contig1002.1.4
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length2457
Homology
BLAST of mRNA_C-tenellus_contig1002.1.4 vs. uniprot
Match: A0A6H5K0L3_9PHAE (Protein transport protein sec16 (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L3_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 4.450e-57
Identity = 313/886 (35.33%), Postives = 373/886 (42.10%), Query Frame = 0
Query: 1598 GIDCVNPLSPPPQVPQG-GQDQVDSSPSKTSGVSEALEVLPCSVLVEAQPSPLVNKSAPLVRPR-NSSGGPFFGFDQYDDTGSTKEDSHGNVSGHQSSDNQADEGPPNRREAEAMFATSAPPPAADSLFSPAAEGDAQENSSDFSSRGFRGNGTGSEGEVRQRPADLFSLGPPPEAPHPSLPNPWGSSPQKAPLXXXXXXXXXXXXXXXXXXC------TSWQGGGKFSSDAVPEAFVGEGDGEAGKFXXXXXXXXXXXXXGESSVAGFSRALSSQSIASAVPAVAHVGSTTGLSFAGGSGRGVGGGEPGRISLQSRQRGIATVVSAGTKPAYPSEPGLVGHVSHIQGGAPRYGDQCGGASQSLAGGEIGEGRGRWGVSPGGQSLAIAAPVSAAVAMAGGSVA-ATRDPRIRPPCALAAFGFAGRLVCMHPRAKVRLASAGAPGQGLPGQADSSFGGGEKQSRLRKGPVKIWSLQSITPPNAFVGDTGVVPGPMIGNTKAALGLVREYVSKRAEGGEDTGE------GKRLLWTVVEIALEHEGRLVSDAGTADESSPESKLLRYLKLSHARCRRS------FTKLSLDNLTKINNQGLEAAVSEKQLAFPGTKSGASQSSRGKGRGWASSGTARQGPGVGDGGTGVTFRA-TGQGPFPGXXXGAAAGVPGLSGRGAGFGGSGMSTRAGDSHGVGEGVDGKPGDNGWGARVTQECSASGVGAQAV----EEVESLLVDGKKEQAVEAAIRTGLWGLAILISSQCPPPAPSEQGPGDGLGVGQGGVENASVTGQSPVYQRVVRQYADAFLRQGTPLHTMALAFSGQAGTAIKHGGKSLXXXXXXXXXXXXXXXXXXXXXXGGKDTNSGDTLVDNWRVTAAAILSNKV 2457
            G    NPL PPP      GQ Q  +S       + A+EV      V A PSP VN S+PL R R N+     FG    D T        GN             GP    +   +FA  AP  AAD LFS  A       +SD +  G      G           +FS GPPPE P PSLPNPWGSSP K PL                          S Q GG+     +P AF G G  E G               G S+   +                   G  +G           GGG P                    KPA           +H+    P    + GGA +   GG      G W                 +V M   +V  A R+  + P   +A+FGF G+LV MHPR K+RLA A       PG   S   G      LRKGPV +WSL+ +  P   V D  + PGP  G   A +  +REYV KRA      GE      GK LLW V  +AL+ +G L SDAG AD  SPE+ +++ LK +HAR + +                            +  LAFPG + GA Q               R G G    G G  F A   Q P   XXX      P +   GAG G        GD       V G+ G +        E    GVG++A     EEVE+ LVDGKKE+AV+A+IR GLWGLA+LI+SQCP  A     P  G G             Q P YQRVVR YA+AFL  GTPLHTMALAFSGQAG AIKHGGKSL   XXXXXXXXXXXXXXXXXX             ++W VTAAAI+SNKV
Sbjct: 2069 GASTGNPLRPPPLSSDVFGQQQQPAS-------AAAVEV------VAAGPSPFVNTSSPLTRSRRNADEASLFGPADDDQT-------DGN-------------GPAGAAD---LFAAEAPVRAADELFSSGA------GASDAAGDGGXXXXAG-----------VFSQGPPPETPAPSLPNPWGSSPLKQPLAEPKRWPTKGGTGFDRPATPSAAEKASSQSGGR--EGGIPSAFFGPGSDEFGADDCGQAFGEPPIVPGPSARPPW-----------------ESGGPSG-----------GGGVP-------------------EKPA--------SSTAHLGPSKPLSTSRFGGA-RGFGGG------GAWAXXX---XXXXXXXXXXSVGMTPSAVTGAPREEGVTPAGVVASFGFGGKLVTMHPRRKIRLAPA-------PGVVPSPDDG----PTLRKGPVNVWSLKDVASPETVVCDAAIFPGPASG---APVDELREYVEKRATAAAAEGELGAEAEGKTLLWGVAGLALQFKGCLTSDAGAADPKSPEAAIVKLLKDAHARRKMATXXXXXXXXXXXXXXXXXXXXXXXXXAQDAALAFPGMR-GAPQGH-----------FFRPGGGRTTPGHGGRFSADAAQAPXXXXXXXXXXXXPAM---GAGVG------PFGD-------VPGRFGGDRPAGGAVVEGVRGGVGSEAATGSHEEVEAFLVDGKKEEAVDASIRAGLWGLALLIASQCPTLAVEAGTPKKGDGXXXXXXXXXXXXXQ-PQYQRVVRLYANAFLHTGTPLHTMALAFSGQAGAAIKHGGKSLTGGXXXXXXXXXXXXXXXXXXG----------FEESWMVTAAAIVSNKV 2781          
BLAST of mRNA_C-tenellus_contig1002.1.4 vs. uniprot
Match: D8LJF8_ECTSI (Protein transport protein sec16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF8_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 5.010e-56
Identity = 212/486 (43.62%), Postives = 252/486 (51.85%), Query Frame = 0
Query: 1993 ATRDPRIRPPCALAAFGFAGRLVCMHPRAKVRLASAGAPGQGLPGQADSSFGGGEKQSRLRKGPVKIWSLQSITPPNAFVGDTGVVPGPMIGNTKAALGLVREYVSKRA--------EGGEDTGEGKRLLWTVVEIALEHEGRLVSDAGTADESSPESKLLRYLKLSHARCRRSFTKLSLDNLTKINNQGLEAA------VSEKQLAFPGTKSGASQSSRGKGRGWASSGTARQGPGVGDGGTGVTFRATGQG---PFPGXXXGAAAGVPGLSGRGAGFGGSGMSTRAGDSHGVGEGVDGKPGDNGWGARVTQECSASGVGAQAV----EEVESLLVDGKKEQAVEAAIRTGLWGLAILISSQCPPPAPSEQGPGDGLGVGQGGVENASVTGQSPVYQRVVRQYADAFLRQGTPLHTMALAFSGQAGTAIKHGGKSLXXXXXXXXXXXXXXXXXXXXXXGGKDTNSGDTLVDNWRVTAAAILSNKV 2457
            A R+  + P   +A+FGF G+LV MHPR K+RLA A       PG   S   G      LRKGPV +WSL+ +  P   V D    PGP    + A +  +REYV KRA        E G +  EGKRLLW+V  +ALE +G L SDAG AD  SPES +++ LK +HAR +                              +  LAFPG   GA Q        +  +G  R  PG+G   +  T +A  Q    P  G   G   GVPG  G              GD    G  V+G  G               GVG++A     EEVE+LLVDGKKE+AV+A+IR GLWGLA+LI+SQCP PA     P  G G             Q P YQRVVR YA+AFL  GTPLHTMALAFSGQAG AIKHGGKSL   XXXXXXXXXXXXXXXXXXX            ++W VTAAAI+SNKV
Sbjct: 2464 APREEGVTPAGVVASFGFGGKLVTMHPRRKIRLAPA-------PGVVPSPDDG----PALRKGPVNVWSLKDVASPETVVCDAAAFPGPA---SSAPVDKLREYVEKRATAAAAEVDEAGAEA-EGKRLLWSVAGLALEFKGCLTSDAGAADPKSPESAIVKLLKDAHARRKTXXXXXXXXXXXXXXXXXXXXXXXXXXXARDAALAFPGM-GGAPQGH------FFRTGGGRTTPGLGGRFSADTAQAPQQQQQEPATGAGVGPFGGVPGRLG--------------GDRPPRGAVVEGVGG---------------GVGSEAATGSHEEVEALLVDGKKEEAVDASIRAGLWGLALLIASQCPAPAVEAGTPKKGDGXXXXXXXXXXXXXQ-PQYQRVVRLYANAFLHTGTPLHTMALAFSGQAGAAIKHGGKSLAGGXXXXXXXXXXXXXXXXXXX----------FEESWMVTAAAIVSNKV 2887          
BLAST of mRNA_C-tenellus_contig1002.1.4 vs. uniprot
Match: A0A7S2BDB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BDB2_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.520e-13
Identity = 51/157 (32.48%), Postives = 81/157 (51.59%), Query Frame = 0
Query: 1995 RDPRIRPPCALAAFGFAGRLVCMHPRAKVRLASAGAPGQGLPGQADSSFGGGEKQSRLRKGPVKIWSLQSITPPNAFVGDTGVVPGPMIGNTKAAL-GLVREYVSKR-AEGGEDTGEGKRLLWTVVEIALEHEGRLVSDAG--------TADESSPE 2141
            RDPRIRP CA+ +FGF G++VCM PR K +L           G  +S    G      RKGP+++WS +++ P    + +    PGP++  T+  +   V+   S   AE G+D      LLW +++++L+  G ++   G        TA E++PE
Sbjct:   44 RDPRIRPSCAIVSFGFGGKVVCMFPRRKRKLGF---------GALESPRDDGNLPKAFRKGPMQVWSAETLVPAALSIPNVESFPGPLLHATRDEVDAFVKVQASDAIAEHGKDAPHA--LLWQLMQVSLDSPGGILVSRGKPGAPVSLTAPENTPE 189          
BLAST of mRNA_C-tenellus_contig1002.1.4 vs. uniprot
Match: A0A7S2WF25_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WF25_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.570e-5
Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 0
Query: 1990 SVAATRDPRIRPPCALAAFGFAGRLVCMHPRAKVRLASAGAPGQG-LPGQADSSFGGGEKQSRLRKGPVKIWSLQSIT--PPNAFVGDTGVVPGPMIGNTKAALGLVREYVSKRA---EGGEDTGEGKRLLW 2115
            S A TRDP +RPPCAL +FGF G+++ M P  K +  S   P     P   +S+  G  +   LR G ++IWS+  +    P       GV  G  +  ++A    VR++V  +A   E     G  + LLW
Sbjct:  354 SAAGTRDPGMRPPCALVSFGFGGKMLTMFPLPKRKFGSFMHPSAASAPAPLESAANGAPE---LRPGNLRIWSVGGLVGNSPGLLSETAGVFRGAPL--SEARPEDVRKHVEDQALAAEAQHGKGSSRALLW 480          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1002.1.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K0L3_9PHAE4.450e-5735.33Protein transport protein sec16 (Fragment) n=1 Tax... [more]
D8LJF8_ECTSI5.010e-5643.62Protein transport protein sec16 n=1 Tax=Ectocarpus... [more]
A0A7S2BDB2_9STRA1.520e-1332.48Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2WF25_9STRA4.570e-533.33Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024340Sec16, central conserved domainPFAMPF12932Sec16coord: 2004..2126
e-value: 2.5E-11
score: 44.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1663..1786
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1352..1415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2186..2233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1545..1630
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2187..2203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 921..944
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 994..1014
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 705..755
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1213..1229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1377..1391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1580..1594
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2252..2278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1545..1579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1682..1698
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1729..1747
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 856..879
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1765..1786
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1283..1325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2336..2358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1612..1629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1185..1240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1002contigC-tenellus_contig1002:4492..15374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1002.1.4mRNA_C-tenellus_contig1002.1.4Choristocarpus tenellus KU2346mRNAC-tenellus_contig1002 4150..15374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1002.1.4 ID=prot_C-tenellus_contig1002.1.4|Name=mRNA_C-tenellus_contig1002.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=2457bp
MDAASLFSDKVPPVHMTTSAGEYDTSELPRDASSPFGRNATTLPSTLVPS
VTEVQEMPSDLFGADSGAEAFGFSSQNSLPPKYSSPPSVEEMPPDLFGGG
NGGGSDAFDRPFGRTPSPPGPYRDNVEQQSLNSQLYPSTGTTRSAFLPND
DIRNPRSGEGATETSGNLSGNAISTSLGAAPPAAFAFDAAPPGRGTGKAN
GGIPSPAIMPSAQLSSSALSFAPTPSYIPPNRFGNPKHDRSPITTLPPPD
NMGEFGSSSGHGFYAGTGVNNMVLESAVAKSSRQDTETESHQPAQMEPQS
RLGFNNMSAFNTSTMGLEAKPATEWMPPRAPPSRPPTTQQAEAVFGAPRT
SVPGHSVDKVVGGVFNVPSTTEQTQQFYGITSGRTVEDVFGAPPQDMFNR
PGEISNNAFGNPPGTKLPSYHPQGVGHGEEGAGATEMASVRVDALQQGQE
ATVVPMGAPTVKSFASSIAPSAGPVDAWVQGVPRPRFPDGKGVGVPPAGL
FSTSGGGNEVVGVATSGPGSAAPSDMFGPSGGGLTLEVDHAADRLGLGVF
GAPPAGDFFGTPVQGVGGDVGNAFGSPVNVSDLFKVDHPGAFKAVDVGTP
TISVLDQTQQEKLPGSGLSFWASELGSDQGMAGERSSPISPDNVISPGGA
ASGFEGAETRTVGVDMVDAKAEGVGATNEVGVEIKGGNTTAKVLEFPVTN
CGLMETQIQDQWEDNSERESRSHSLASPPSPASPPQEAKPEMTKLPLNTL
LPDLPQRSPREKFHFEETEGTPCSRSFSDEYVGSHPDTLEQVRSLAPESI
LLAQSSLMPTLTLPPAVAVEVPIPASQTSHDFPPAVVETQQIEVPLQGDE
TLKQSSRSGQALVENIHPESPPRNNGDAHSVMSAPPHAGISEQVVLPEGQ
SGNCDRLLEEDEPPLGKVMSALQTLESRSGLQEEDSGQELYRVGEGEEDG
WVRKWDRKGELSDNELGKEAIADGKTAESGVEIGLRLATGDQGGGEVEML
SGGPVQSLETTQDGNGQRFGYFALQGPDTRAGLGVEAGPERGFGIGQKAK
GTGGILRNNGCEQLGMDKGDIQKGVHSNLGIEKQLMDLGDPSQGVPTSFS
DEQQHSMDVKEIQGAPVSLGSEPQAKGLKDVQEGVPASFGTEQQAMGLGD
VRGGNSELTVPDLETVKVESVQRSGDVKVDDMKGQVCEHEAGEAGGGGTA
GNNGVSWHRVAEEDLPGMSDRKSDSSDSESESGSDVTDLSTVETTASDFF
MMAPIPSAPFSGSSSVTSSITVSRIASRDSLSGVPITPPSPSSIAAALSK
RRCLRERGNQKGPHHGSISPNLHGKSIGDRLMYRLQRGVDARLPPPTVST
MGSITATADASQGKGLTRPRTLRYSPSGPLSIGSGSSPGAVSSGPWGLYR
PDSSRVIHPPRRRRPGMTDVGRPVVVDRGGAGIGPSPGSQSEEVKAGEEV
DVGLGIDVPSWLKDLEVHGEVEVVAGALEKPSSDLLNNEDPHRVWQQSSA
VDNGGEGGLEEMRSFEGVVPSPVVEVKAEVVRLVEEDARRQLRTKGISSS
HTLPSVPNTGEEGVGQGDVNVSSENTPEVGDELRPSKEAMVDLRGKQGID
CVNPLSPPPQVPQGGQDQVDSSPSKTSGVSEALEVLPCSVLVEAQPSPLV
NKSAPLVRPRNSSGGPFFGFDQYDDTGSTKEDSHGNVSGHQSSDNQADEG
PPNRREAEAMFATSAPPPAADSLFSPAAEGDAQENSSDFSSRGFRGNGTG
SEGEVRQRPADLFSLGPPPEAPHPSLPNPWGSSPQKAPLIPPPWAQKAGK
GFDQPPPCTSWQGGGKFSSDAVPEAFVGEGDGEAGKFGGEGSGDKNAFGG
GESSVAGFSRALSSQSIASAVPAVAHVGSTTGLSFAGGSGRGVGGGEPGR
ISLQSRQRGIATVVSAGTKPAYPSEPGLVGHVSHIQGGAPRYGDQCGGAS
QSLAGGEIGEGRGRWGVSPGGQSLAIAAPVSAAVAMAGGSVAATRDPRIR
PPCALAAFGFAGRLVCMHPRAKVRLASAGAPGQGLPGQADSSFGGGEKQS
RLRKGPVKIWSLQSITPPNAFVGDTGVVPGPMIGNTKAALGLVREYVSKR
AEGGEDTGEGKRLLWTVVEIALEHEGRLVSDAGTADESSPESKLLRYLKL
SHARCRRSFTKLSLDNLTKINNQGLEAAVSEKQLAFPGTKSGASQSSRGK
GRGWASSGTARQGPGVGDGGTGVTFRATGQGPFPGPFPGAAAGVPGLSGR
GAGFGGSGMSTRAGDSHGVGEGVDGKPGDNGWGARVTQECSASGVGAQAV
EEVESLLVDGKKEQAVEAAIRTGLWGLAILISSQCPPPAPSEQGPGDGLG
VGQGGVENASVTGQSPVYQRVVRQYADAFLRQGTPLHTMALAFSGQAGTA
IKHGGKSLSALGMGGVNRDGGVVGGVNRDAGGKDTNSGDTLVDNWRVTAA
AILSNKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024340Sec16_CCD