mRNA_C-tenellus_contig9972.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Match: A0A0L0DB26_THETB (Protein kinase domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DB26_THETB) HSP 1 Score: 99.4 bits (246), Expect = 1.440e-22 Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 1 RTLPGMLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVPASIGNIIGALVMVAGPFFFLH 231 RTLPG+++GIF PVL FVALGA H+ ANMGYF++ LI N P+TW EA+ WNI PA +GN +G +++A P F H Sbjct: 662 RTLPGVILGIFLPVLAFVALGAAHSPANMGYFALSLIN-GNSPITWGEAWAWNIAPAVLGNALGGTLLLAFPIFISH 737
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Match: A0A0L0DB06_THETB (Formate dehydrogenase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DB06_THETB) HSP 1 Score: 85.1 bits (209), Expect = 7.620e-18 Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 1 RTLPGMLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVPASIGNIIGALVMVAGPFFFLH 231 RTLPG+++GIF PV+ FV LGA H+ NMGYF++ LI N P+TW + + W++ A GN++G +++ P F H Sbjct: 270 RTLPGIVLGIFLPVMAFVVLGAAHSPTNMGYFALSLIN-GNSPITWGDTWAWHLPAAIAGNLLGGALLIGLPIFLAH 345
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Match: A0A7S1XTP2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTP2_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 5.960e-16 Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 1 Query: 1 RTLPGMLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVPASIGNIIGALVMVAGPFFF 225 R+L G +G+ PV FV+LG QH+ ANMGYF I LI TW E F WN++PAS+GNIIG +MV FF+ Sbjct: 245 RSLLGKYIGVLPPVTLFVSLGLQHSPANMGYFMIALIN-DETKYTWGEVFGWNLIPASLGNIIGGSMMVGCSFFY 318
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Match: A0A1G9FAG9_9RHOB (Formate transporter n=1 Tax=Aliiruegeria lutimaris TaxID=571298 RepID=A0A1G9FAG9_9RHOB) HSP 1 Score: 78.6 bits (192), Expect = 8.730e-16 Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = 1 Query: 1 RTLPGMLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVPASIGNIIGALVMVAGPFFF 225 TL G V IF V FVA QH+ ANMGYFS+ + T P W +AFLWN++PA IGNI+G ++VA PF+F Sbjct: 193 NTLFGKFVPIFLVVSLFVAGNLQHSPANMGYFSLSMATGGGPG--WSDAFLWNVIPAGIGNILGGSLLVALPFWF 265
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Match: A0A5C6VPU5_9BACI (Formate/nitrite transporter family protein n=3 Tax=Metabacillus TaxID=2675233 RepID=A0A5C6VPU5_9BACI) HSP 1 Score: 77.4 bits (189), Expect = 2.770e-15 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 1 RTLPGMLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVPASIGNIIGALVMVAGPFFFLH 231 R + G ++G PV FVA QH+ ANMGYFSIG+ T N TW + L+N++PASIGNIIG +MV+ F F + Sbjct: 202 RDITGKIIGTLLPVTLFVAGNFQHSAANMGYFSIGIFT--NDTYTWYQFLLYNLIPASIGNIIGGAIMVSLLFSFAY 276
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Match: A0A2H0VRD3_9BACT (Formate dehydrogenase n=1 Tax=Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9 TaxID=1973935 RepID=A0A2H0VRD3_9BACT) HSP 1 Score: 75.1 bits (183), Expect = 1.750e-14 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 1 RTLPGMLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVPASIGNIIGALVMVAGPFFF 225 +T+ G + IF V F+A QHT ANMG FSI + + P W AF WNI+PA+IGNIIG +MVA PF++ Sbjct: 195 KTITGKFIPIFLAVSLFIAANFQHTPANMGLFSISMALDNEPG--WVVAFFWNIIPATIGNIIGGSMMVALPFWY 267
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Match: UPI001960BC91 (formate/nitrite transporter family protein n=1 Tax=Thalassobacillus pellis TaxID=748008 RepID=UPI001960BC91) HSP 1 Score: 75.1 bits (183), Expect = 1.980e-14 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 1 RTLPGMLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVPASIGNIIGALVMVAGPFFFLH 231 R + G L+G PV+ FVA QH+ ANMGYFS+G++ S+ P W E L+N++PASIGNIIG ++VA F + + Sbjct: 199 RDITGKLLGTTLPVILFVAGNFQHSAANMGYFSLGVL--SDTPYAWYEFILFNLIPASIGNIIGGALLVALIFTYAY 273
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Match: A0A0A5I667_9BACI (Formate dehydrogenase n=1 Tax=Pontibacillus halophilus JSM 076056 = DSM 19796 TaxID=1385510 RepID=A0A0A5I667_9BACI) HSP 1 Score: 74.3 bits (181), Expect = 4.450e-14 Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 1 RTLPGMLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVPASIGNIIGALVMVAGPFFFLH 231 R + G ++G PV+ FVA QH+ ANMGYFS+G++ S P TW E +N++PASIGNIIG ++V+ F + + Sbjct: 213 RDITGKILGTALPVILFVAGNFQHSAANMGYFSLGIL--SKPDYTWYEFIFFNLIPASIGNIIGGAILVSLLFSYAY 287
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Match: A0A1G9MRD2_9RHOB (Formate transporter n=1 Tax=Aliiruegeria lutimaris TaxID=571298 RepID=A0A1G9MRD2_9RHOB) HSP 1 Score: 73.9 bits (180), Expect = 4.650e-14 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 1 RTLPGMLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVPASIGNIIGALVMVAGPFFF 225 TL G V IF V FVA QH+ ANMGYFS+ + P W +AFLWN++PA IGNI+G ++V PF+F Sbjct: 191 NTLVGKYVPIFLVVSLFVAGNLQHSPANMGYFSLSMAHGGGPG--WVDAFLWNVIPAGIGNILGGSLLVVLPFWF 263
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Match: A0A2M7DGF9_9FLAO (Formate dehydrogenase n=1 Tax=Flavobacteriaceae bacterium CG02_land_8_20_14_3_00_34_13 TaxID=1973994 RepID=A0A2M7DGF9_9FLAO) HSP 1 Score: 73.9 bits (180), Expect = 6.290e-14 Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 1 RTLPGMLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVPASIGNIIGALVMVAGPFFF 225 +T+ G + IF V FVA QH+ ANMGYFS+ + T + P WE A LWN++PA+IGNI+G +VA PF++ Sbjct: 220 KTIIGKYLPIFLAVSLFVAANFQHSPANMGYFSLIMPTGNGPG--WENAILWNLIPAAIGNILGGTFLVALPFWY 292 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9972.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9972.1.1 >prot_C-tenellus_contig9972.1.1 ID=prot_C-tenellus_contig9972.1.1|Name=mRNA_C-tenellus_contig9972.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=72bp MLVGIFFPVLGFVALGAQHTTANMGYFSIGLITMSNPPVTWEEAFLWNIVback to top mRNA from alignment at C-tenellus_contig9972:179..754- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9972.1.1 ID=mRNA_C-tenellus_contig9972.1.1|Name=mRNA_C-tenellus_contig9972.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=576bp|location=Sequence derived from alignment at C-tenellus_contig9972:179..754- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9972:179..754- >mRNA_C-tenellus_contig9972.1.1 ID=mRNA_C-tenellus_contig9972.1.1|Name=mRNA_C-tenellus_contig9972.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=216bp|location=Sequence derived from alignment at C-tenellus_contig9972:179..754- (Choristocarpus tenellus KU2346)back to top |