mRNA_C-tenellus_contig9912.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9912.1.1
Unique NamemRNA_C-tenellus_contig9912.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: D8LB11_ECTSI (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB11_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 7.780e-125
Identity = 193/282 (68.44%), Postives = 221/282 (78.37%), Query Frame = 1
Query:    1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSERAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGK-PLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKVKG-GSGGXXXXGVGREARDPL 840
            KD   DDPILA+ VMG+   NPIGLAAGFDKH EAVDGL++TGFGFVE+GSVTP PQ GNPKPRMFRL EDEGVINRCGFNS GL  V++RL +R  +    R GLLGVNVGKNKLSED++AD+C+GIRTLGCY DYLVVNVSSPNTPGLR LQ   AI+ +I  AM+ARD+V EST    PLPLLVKIAPDL+E EK DIA V + TKVDGLIVSNTT+SRP  L+S+   E GGLSG PL  +ST+T+ D+YRLTKGKV   G GG    G G+EA D +
Sbjct:  129 KDWTMDDPILASHVMGLRFPNPIGLAAGFDKHGEAVDGLMDTGFGFVEVGSVTPNPQEGNPKPRMFRLEEDEGVINRCGFNSDGLRVVQQRLKKRQASAMNGRAGLLGVNVGKNKLSEDSSADFCKGIRTLGCYADYLVVNVSSPNTPGLRDLQGVKAIRAVILAAMDARDQVCESTGNPMPLPLLVKIAPDLTEREKRDIANVVLSTKVDGLIVSNTTVSRPSYLRSESKGEAGGLSGKPLTKMSTETIRDMYRLTKGKVPLIGVGGV---GTGQEAYDKI 407          
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: Q75XR0_EUGGR (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Euglena gracilis TaxID=3039 RepID=Q75XR0_EUGGR)

HSP 1 Score: 338 bits (867), Expect = 9.120e-112
Identity = 172/269 (63.94%), Postives = 201/269 (74.72%), Query Frame = 1
Query:    1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSERAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGK---------PLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780
            +D   D   L   V G+   NP+GLAAGFDKH EAVD L+ TGFGFVEIG+VTP PQ GNP PRMFRL +D  +INR GFNS GLAAVRKRL  R   P+P R GL+GVNVGKNKL EDAAADY +G+R LG Y DYLV+NVSSPNTPGLR LQ+R A+ D+I+ +M ARDEVV    G+         PLPLL+KIAPDL+ EEK DIA V METK+DGLIVSNTT+SRP SL S H  + GGLSGAPL+++STQ + D+Y LT+G V
Sbjct:   89 RDVHPDPADLEMEVWGLKFSNPLGLAAGFDKHGEAVDALLGTGFGFVEIGTVTPLPQPGNPSPRMFRLEQDRAIINRYGFNSQGLAAVRKRLEARQHRPAP-RGGLVGVNVGKNKLQEDAAADYSKGLRELGPYADYLVINVSSPNTPGLRNLQKRSAMADLIKASMVARDEVVRDADGRRAAAGKSAAPLPLLIKIAPDLTAEEKQDIAEVVMETKIDGLIVSNTTVSRPASLLSPHKGQTGGLSGAPLREMSTQAIRDMYALTRGTV 356          
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: A0A7S1JAW3_9EUGL (Dihydroorotate dehydrogenase (quinone), mitochondrial (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JAW3_9EUGL)

HSP 1 Score: 333 bits (854), Expect = 1.120e-109
Identity = 170/269 (63.20%), Postives = 202/269 (75.09%), Query Frame = 1
Query:    1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSERAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVE------STAGK---PLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780
            +D   DDP L   V G+   NP+GLAAGFDKHA+A+D L+ TGFGFVE+GSVTP PQ GNP PRMFRL ED GVINR GFNS GLAAVR+RL  R     P R GL+G+N+GKNK  EDAAADY +GI  LG YGDYLVVNVSSPNTPGLR LQ+R A+ D+I  A  ARD+V++      + AGK   PLPLL+KIAPD++ +E+ DIA V ++TK+DG++VSNTTI RP SLQS H  EGGGLSGAP+K LST  + D+Y LTKG V
Sbjct:  101 RDPVPDDPALDMQVWGLRFPNPVGLAAGFDKHAQAIDALLATGFGFVEVGSVTPLPQPGNPVPRMFRLVEDRGVINRYGFNSEGLAAVRERLHARQAARPPNR-GLVGINLGKNKEQEDAAADYAQGIAELGPYGDYLVVNVSSPNTPGLRMLQKRSAMADLITSAQRARDQVLQDEDGRRAAAGKGARPLPLLIKIAPDITPDERKDIAEVVLKTKIDGMVVSNTTIGRPPSLQSPHKAEGGGLSGAPVKALSTAVIRDMYALTKGTV 368          
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: A0A836CC01_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC01_9STRA)

HSP 1 Score: 327 bits (837), Expect = 3.130e-107
Identity = 173/277 (62.45%), Postives = 209/277 (75.45%), Query Frame = 1
Query:   19 DPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSERAVNPSPLRKGLLGVNVGKNK-LSEDAAAD-YCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKVKG-GSGGXXXXGVGREARDPL 840
            DPIL T V+G++  N IGLAAG+DK+AEAV+GL++ GFGF+EIG+VTPEPQ GN KPRMFRL ED+ VINRCGFN+HG  AV +RL  RA       KG LGVNVGKNK ++ED AAD YC  I+ L  YGD++VVNVSSPNTPGLR LQRR AI  +I++A +ARD+V   T    LPLLVKIAPDL+E+EKADIA VA+ ++VDGLIVSNTTI+RP  L+S    E GGLSGAPL+D ST  + D+YRLT GKV   G GG    G G++A D +
Sbjct:  110 DPILQTQVLGLTFPNAIGLAAGYDKNAEAVNGLLDMGFGFIEIGTVTPEPQPGNDKPRMFRLVEDKAVINRCGFNNHGAVAVAERLKARAEAQQGPAKGFLGVNVGKNKWVAEDKAADDYCAAIKALAPYGDFVVVNVSSPNTPGLRLLQRREAIASLIERAADARDQVQVQTKKATLPLLVKIAPDLTEQEKADIAAVALSSRVDGLIVSNTTIARPAGLRSNFKGETGGLSGAPLRDASTAIIADMYRLTGGKVPLIGVGGV---GTGQDAYDKI 383          
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: A0A2D4BER9_PYTIN (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BER9_PYTIN)

HSP 1 Score: 320 bits (819), Expect = 1.640e-104
Identity = 159/263 (60.46%), Postives = 207/263 (78.71%), Query Frame = 1
Query:    4 DGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSE---RAVNPSPL-RKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780
            D + DD IL  +V+G    NP+G+AAGFDK AEA++GL++ GFGFVEIGSVTP+PQ GNPKPR+FRL+ED  VINR GFNS GL +V KRL     R  N S   R G+LGVN+GKNK +EDAAADY  G++ LG Y DYLVVNVSSPNTPGLR+LQ +  +++++ + + ARDE+V +  G+P+PLLVKIAPDL+ ++K DIA VA+  ++DGLIVSNTT+SRPESL+S+H  E GGLSGAP+++LSTQ + D+Y+LT G++
Sbjct:  105 DEKTDDEILRVNVLGREFPNPLGMAAGFDKDAEAMEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLTEDRAVINRYGFNSQGLESVAKRLEAYMWRRENLSRWHRAGVLGVNLGKNKTTEDAAADYVEGVKALGKYADYLVVNVSSPNTPGLRSLQGKQQLQELVSRVLTARDELV-AQLGRPIPLLVKIAPDLTADDKKDIADVALALQLDGLIVSNTTLSRPESLKSEHKHETGGLSGAPVRELSTQVLSDMYKLTGGRI 366          
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: A0A8K1C5T7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5T7_PYTOL)

HSP 1 Score: 314 bits (805), Expect = 2.010e-102
Identity = 156/263 (59.32%), Postives = 205/263 (77.95%), Query Frame = 1
Query:    4 DGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRL----SERAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780
            D E D   L   V+G    NP+G+AAGFDK AEA++GL++ GFGFVEIGSVTP+PQ GNPKPR+FRLSED+ VINR GFNS GLA+V  RL    + R +  +  R G+LGVN+GKNK +EDAAADY  G++TLG + DYLVVNVSSPNTPGLR+LQ +  + +++ + + AR+EV E+  G+ +PLLVKIAPDL+E++K DIA VA++ K+DGLIVSNTT+SRP++L+S H  E GGLSG P++DLSTQ + D+Y+LT G++
Sbjct:  105 DTEVDPESLRVKVLGREFPNPLGMAAGFDKDAEAMEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLSEDKAVINRYGFNSQGLASVAARLDSYVASRELRSAWHRNGVLGVNLGKNKTTEDAAADYIEGVKTLGRFADYLVVNVSSPNTPGLRSLQGKQQLFELVSRVLTARNEV-ETQEGRKIPLLVKIAPDLTEDDKRDIADVALDLKLDGLIVSNTTLSRPDTLKSVHKGETGGLSGLPVRDLSTQVLGDMYKLTDGQI 366          
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: A0A662X2Z7_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2Z7_9STRA)

HSP 1 Score: 311 bits (798), Expect = 2.300e-101
Identity = 156/267 (58.43%), Postives = 204/267 (76.40%), Query Frame = 1
Query:    1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSE----RAVNPSP---LRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780
            KD + D  +LA  V G +  NP+G+AAGFDK+ EA++G+++ GFG VEIGSVTP+PQ GNPKPR+FRLSED GVINR GFNS GL  VR RL +    R    +P    R G+LGVN+GKNK +EDAAADY +G+  LG Y DYLVVNVSSPNTPGLR+LQ +  +++++ + +EARDEV  S   + +PLLVKIAPDL+ ++K DIA VA+  K+DGL+V+NTT+SRP+SL+S    EGGGLSG P++DLSTQ + D+Y+LT+GK+
Sbjct:  101 KDDQPDASLLAVDVFGQTFPNPLGIAAGFDKNGEAIEGMLDVGFGCVEIGSVTPKPQPGNPKPRVFRLSEDRGVINRYGFNSKGLDDVRARLEKYVASRETRTAPGQGHRAGVLGVNLGKNKTTEDAAADYVQGVHALGKYADYLVVNVSSPNTPGLRSLQGKQQLQELLVRVLEARDEVAASEK-RAIPLLVKIAPDLTTDDKQDIADVALALKLDGLVVANTTLSRPDSLKSSCKIEGGGLSGLPVRDLSTQVLGDMYKLTEGKI 366          
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: W4FYL0_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FYL0_9STRA)

HSP 1 Score: 310 bits (795), Expect = 5.770e-101
Identity = 156/266 (58.65%), Postives = 197/266 (74.06%), Query Frame = 1
Query:    1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSE------RAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780
            KD   DDP L  S++G+S DNPIG+AAGFDKHA+A+ GL++ GFGFVEIGSVTP PQ GNPKPR+FRL ED GVINR GFNS G A VR+RL +              R+G LGVN+GKNK S+    DY RG+ TLG +GDYLV+N+SSPNTPGLR+LQ +  +  ++   ++AR+++      K LPLLVKIAPDL+ ++  DIA VA+  ++DGLIVSNTTISRPESL S HA E GGLSGAP+K+LST  +H +Y+LT+GK+
Sbjct:   93 KDTVPDDPSLHVSLLGLSFDNPIGIAAGFDKHADAMQGLLDMGFGFVEIGSVTPLPQDGNPKPRVFRLVEDRGVINRYGFNSQGHAKVRERLEKYKYWTLSTTTSKQYRRGPLGVNLGKNKSSDSPIEDYVRGVETLGPFGDYLVINISSPNTPGLRSLQGKKELHALVSAVLDARNKL-----WKRLPLLVKIAPDLTSDDMRDIAEVALALQIDGLIVSNTTISRPESLLSPHAAETGGLSGAPVKELSTTVLHSMYKLTEGKI 353          
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: H3GAQ0_PHYRM (Dihydroorotate dehydrogenase (quinone), mitochondrial n=17 Tax=Phytophthora TaxID=4783 RepID=H3GAQ0_PHYRM)

HSP 1 Score: 308 bits (788), Expect = 7.340e-101
Identity = 153/267 (57.30%), Postives = 205/267 (76.78%), Query Frame = 1
Query:    1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGL----AAVRKRLSERAVNPSP---LRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780
            KD E D  +L    +G+   NP+G+AAGFDK AEA++G+++ GFG VEIGSVTP+PQ GNPKPR+FRL ED GVINR GFNS GL    A + + ++ERAV  +P    R G+LGVN+GKNKL+EDAAADY +G+  LG Y DYLVVNVSSPNTPGLR LQ +  ++ ++ + ++ARDEV  +   + +PLLVKIAPDL++++K DIA VA+E K+DGL+VSNTT+SRP++LQ +   E GGLSG P++DLST+ + D+Y+LTKG++
Sbjct:   27 KDPEDDPELLRVRTLGLQFPNPLGIAAGFDKDAEAMEGMLDMGFGCVEIGSVTPQPQPGNPKPRVFRLYEDRGVINRYGFNSKGLEHAGARLHEYVAERAVRTAPGNGHRAGVLGVNLGKNKLTEDAAADYVQGVHALGQYADYLVVNVSSPNTPGLRTLQGKLQLQQLLVRVIKARDEVA-TQEKRDIPLLVKIAPDLTQDDKQDIADVALELKLDGLVVSNTTLSRPDTLQGEAKGETGGLSGLPVRDLSTKVLGDMYKLTKGQI 292          
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: K3WLG9_GLOUD (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLG9_GLOUD)

HSP 1 Score: 310 bits (795), Expect = 8.310e-101
Identity = 153/264 (57.95%), Postives = 201/264 (76.14%), Query Frame = 1
Query:    1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSE----RAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780
            +D   D  +L+    G    NP+G+AAGFDK+AEA++GL++ GFGFVEIGSVTP+PQ GNPKPR+FRL+ED GVINR GFNS G+ AV K L      R ++    R G+LGVN+GKNK +EDAAADY  G+ TLG Y DYLVVNVSSPNTPGLR+LQ +  +++++ + ++AR  V E+   + +PLLVKIAPDL+E++K DIA VA+E  +DGLIVSNTT+SRP++L+S H  E GGLSGAP++DLSTQ + D+Y+LT G +
Sbjct:  111 RDHGTDSLVLSVKAFGQEFPNPLGMAAGFDKNAEAIEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLTEDRGVINRYGFNSSGMDAVAKSLESYVTTRELSKRFHRSGVLGVNLGKNKTTEDAAADYVEGVYTLGKYADYLVVNVSSPNTPGLRSLQGKQQLQELLTRVLDARKNV-EAKENRKIPLLVKIAPDLTEDDKKDIADVAVELNLDGLIVSNTTLSRPDTLKSSHKIETGGLSGAPVRDLSTQVLSDMYKLTNGMI 373          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB11_ECTSI7.780e-12568.44Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
Q75XR0_EUGGR9.120e-11263.94Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A7S1JAW3_9EUGL1.120e-10963.20Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A836CC01_9STRA3.130e-10762.45Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A2D4BER9_PYTIN1.640e-10460.46Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A8K1C5T7_PYTOL2.010e-10259.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662X2Z7_9STRA2.300e-10158.43Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
W4FYL0_9STRA5.770e-10158.65Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
H3GAQ0_PHYRM7.340e-10157.30Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
K3WLG9_GLOUD8.310e-10157.95Dihydroorotate dehydrogenase (quinone), mitochondr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9912contigC-tenellus_contig9912:367..5729 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LB11
Preferred nameDHODH
PFAMsDHO_dh
Model size840
Max annot lvl2759|Eukaryota
KEGG rclassRC00051
KEGG koko:K00254
KEGG ReactionR01868
KEGG Pathwayko00240,ko01100,map00240,map01100
KEGG ModuleM00051
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0001101,GO:0003674,GO:0003824,GO:0004152,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005758,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006950,GO:0007275,GO:0007565,GO:0007584,GO:0007589,GO:0007595,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009163,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009410,GO:0009605,GO:0009987,GO:0009991,GO:0010033,GO:0010181,GO:0010243,GO:0010821,GO:0010941,GO:0010942,GO:0014070,GO:0014074,GO:0016020,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0019866,GO:0022414,GO:0022603,GO:0030879,GO:0031000,GO:0031090,GO:0031667,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032553,GO:0033043,GO:0034404,GO:0034641,GO:0034654,GO:0036094,GO:0036270,GO:0036477,GO:0042221,GO:0042493,GO:0042594,GO:0042981,GO:0043025,GO:0043065,GO:0043067,GO:0043068,GO:0043167,GO:0043168,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043279,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046112,GO:0046134,GO:0046390,GO:0046483,GO:0046903,GO:0048037,GO:0048038,GO:0048039,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048732,GO:0048856,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050878,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0051704,GO:0055086,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072527,GO:0072528,GO:0090140,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1903576
Exons5
Evalue1.28e-125
EggNOG OGsCOG0167@1|root,KOG1436@2759|Eukaryota
EC1.3.5.2
Descriptiondihydroorotate dehydrogenase activity
Cds size840
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790207.0934272-CDS-C-tenellus_contig9912:366..5661680790207.0934272-CDS-C-tenellus_contig9912:366..566Choristocarpus tenellus KU2346CDSC-tenellus_contig9912 367..566 +
1680790207.1134412-CDS-C-tenellus_contig9912:1050..12041680790207.1134412-CDS-C-tenellus_contig9912:1050..1204Choristocarpus tenellus KU2346CDSC-tenellus_contig9912 1051..1204 +
1680790207.124616-CDS-C-tenellus_contig9912:2803..29651680790207.124616-CDS-C-tenellus_contig9912:2803..2965Choristocarpus tenellus KU2346CDSC-tenellus_contig9912 2804..2965 +
1680790207.134554-CDS-C-tenellus_contig9912:4660..47681680790207.134554-CDS-C-tenellus_contig9912:4660..4768Choristocarpus tenellus KU2346CDSC-tenellus_contig9912 4661..4768 +
1680790207.1517117-CDS-C-tenellus_contig9912:5513..57291680790207.1517117-CDS-C-tenellus_contig9912:5513..5729Choristocarpus tenellus KU2346CDSC-tenellus_contig9912 5514..5729 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9912.1.1prot_C-tenellus_contig9912.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9912 367..5729 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9912.1.1

>prot_C-tenellus_contig9912.1.1 ID=prot_C-tenellus_contig9912.1.1|Name=mRNA_C-tenellus_contig9912.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=280bp
KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIG
SVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSERAVNPS
PLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGL
RALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADI
ATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVH
DVYRLTKGKVKGGSGGGGEGGVGREARDPL
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mRNA from alignment at C-tenellus_contig9912:367..5729+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9912.1.1 ID=mRNA_C-tenellus_contig9912.1.1|Name=mRNA_C-tenellus_contig9912.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5363bp|location=Sequence derived from alignment at C-tenellus_contig9912:367..5729+ (Choristocarpus tenellus KU2346)
AAGGATGGAGAAGGCGACGACCCCATCCTAGCCACATCCGTAATGGGTAT GTCCCTGGACAACCCCATCGGGCTGGCTGCGGGTTTTGACAAGCATGCAG AGGCTGTGGATGGCCTCATAGAAACCGGATTTGGTTTTGTGGAGATCGGG AGCGTTACCCCGGAGCCTCAGTTGGGAAACCCAAAGCCGAGAATGTTCAG GTACTTAATAATAATAATAATAATAATAATAATATCTGTGTGAGCAAGTG GTTGTAATCACCATCCTCATCCACATCTCAATCGCCTTGATACAAGTGAT TGAGTTTCAACTCTGTATTAAATGTAGAGATGTAGGTGGATATCATGTGT TTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTACCTTGTTGATATAAGAA TAGTGTAAAATAAATAAAACAAAAAAGACAAAAGAGGGGTTTTTCTAGCG CAGTTTCCTGCCTGTACCCTTTTTTCACTCTTTTTTTGTTTGGAAACTGT ACATATTAATACTATCAGTAGTGTTGTAAACTGTACACATTAATCTTATC AATAGTGTTGACAACATCAAAGGTTTTTGTGAGACAATTACCTACCTGCC TGCCTCTCTCTCATTTTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTC TCTTTGCCTGTGTGTGTTACTATTGCCTGGTCAGGTTGAGTGAAGATGAG GGTGTCATCAACCGCTGTGGTTTTAACAGCCATGGCCTGGCTGCAGTAAG GAAGAGACTAAGTGAACGAGCTGTGAATCCGAGCCCATTGAGAAAGGGCC TGCTAGGTGTCAATGTGGGGAAGAACAAACTCAGTGAGGTGAAAACGTGG GATTGACTGTCTTATGATAGTGTGGCTTGGATTGACTTGCAGTGATTATG GGAGATGATTTGGGGGCGGCCAGGGGGGGGGGGGGATGGAACTGCCAAGG TGGTAGGGGAAGTGGTTATTAATGGGNNNNNNNNNNGAATTGGTTTTTGT ATTTTTTTGTGTTCGTGGTGTTGGGTTTTAGTGGGGGGGGTAGGGGGCGG TGTTGGGGGGGGGGGGGGGGGGGGGGGGGTATGGAACTGCCAAGGTGGTA GGAGTAGTAGTTATTAATGTGTGTGTGTGGATGGTAGTGGTGCTCTGGGG TGGTTATTAAGGTTGTAGTAATGGAGGTGTCTTGATGCTGTAAGTTGAGG ATGAGGGTAGCCTTGAATGGGTATATTGATGTTGATGTTATTGATATGGT TATTGATATTGATATATATAACAGGTAGAAAAAAAGGGGTAATTTTTGGA AGTTTTTTTGTGACAAGTAGGGGTAGGTAGAGGAGGCGCATTTGGACAAG AAAAGGGGGGGGGGGGGGACAGTACAATTGTACTAACATTGATGATAACA GTAGTACTCATTTCAATTAAACCCACGAATATTGCTGACACGTTTGCACC ATATTTTGCTTTGTCGGTAGGGTGTTCATACCTTGAAGTGGTGGTAGGGG TTGTGTTCTAACAGGCGATTTGTGTTTTTTTGTAGAGGCACGACTTCAAT TGTCATACCTTCAATTGTCATTCATACCTTGAGGGGCTTCCAGTCCATGC AACTCTTACCTAAACCGCGCATTGATGTCTTCAAATATTACTTTACTGCT TGCTCATGAAAATAATATGCAATAAAAAAAATCATTCCGTTATTGAAATG GTGCAGCAGTAGTAGCACCGTTGTTAAGTTTTTAAAAAAGTTTTTAAAAC GAGAAACGCGGTCATTTCAGTTTTTAAAATGTTAGTTGACTTATAAGAAA GTAATGGTGAGAACAGTTCGATTGAATCAAACTGTGAGAAGTACAAGCCA TGTCAAGTTGGTTTTGAGGATACATATATATATATATATATATATTTATT TCTTTATTTTTTAATACTGTACTTTGAAGAATGTATTTTTTTTATGATAT ACACACACTTTGAAGAAAGTGACGCATTGATTGAAAAAAAAAATTACGAT ATTGATATGTTGTTATTTGATTCAAAAAATCAACTCGATCAAATTGTGAT AATTTGCAACAATATCAATACCTATCAGCCGGTGCATTTTATATTATTTA TTATTCACCTCTTTTGTTATCTGGTGGTGCTGTACTACTGTGTTATTTTA TTAATAGCATTGATACTGATAATAGTGTCTTGTAGTACCCTCTGTATTTC AATGGGAGGGGGGGGTTATTAATCATCTTTTTCTTATTACATTGTAGGTA CAGGATTTAAACATCCTTTTTTATTATTTTGCAGTTCGTTTTGTACGTCC AAGCATGATTTAATTTTTTTTCTCCTGCTGCACCTCAATTTCTTCTTCCC AACTCTCTTCCAACCCCACCCCCCACCCACCCGCTATCAATACTTTAATC TTTTCATTTAATGTCATGTGTCTGTGTGTCTGTGTAGGATGCTGCAGCCG ACTACTGCCGTGGCATTAGGACTCTGGGCTGCTACGGCGACTACCTTGTG GTCAACGTCTCCTCCCCCAACACCCCTGGGCTAAGGGCACTGCAAAGGCG AGGGGCCATCAAAGACATCATACAAAAGGCCATGGAGGCCCGAGATGAGG TATGTTTTATCTGGATCTGGATCTGTCTGGTAGTGAGCTGTGGTTATGGG TGTGTGAGAGTTTTATTGTCTAGGTCTTGTGTGTTTTTTGTTTTAAGTGG CGGTGGGGGGGGGGGGGGGGGGGTTGGGGTTGGGGTTATATTTTTGGTAT GTTGTGGTTTTTTGGGAGTTGGGGGGGGTTAGTTGTGGTGGGTTGTGGGT ATANNNNNNNNNNGGGGGGGGGTGTTTGTGGGGTTTGGTTTGGTTTTTTT TTGTGGGGGTTTTTGTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGG GGGGGGGTTAGGGTTAGGGTTATATTATTGGTATGTTGTGAGTTTTTTGG ATATAGGGGTAGATAGTTGTGTAGGGTTAGTGATATATGTATATTTAATA TTTTATTATTTATTTATGCAGAGGTGTTCAACCAGTATGTGCTGTATTGT TGTCTTGTAGTACTCTAACAGTGGGTGATACAATCTGAGAAAGGGTTGTC CTTGAGTTTTCATAGGCCCTTAGGATTGACAACCTTGTGGTAGATGTGTT TCCAGAACTGTAGCAGCCAATTTTCGCTACATATATATATAGCAGTGTTT CCAAAGGAAATAACATTGTCCAGTCAAACACATGTCCTAAGAGAGCTTAA CTGTATTTCAGGCATGGCCATGTTGTCTGTTGTGGGAGCTTAGAAGAGGG GCCTTTAAACTCAATGGAGACCAACGTCGACCCACCTCTTGGATTGATTC ACTCAGTGGTGAATGCTCTACTGTGGTGCTGTTGCTGTTGTAGAAAGCGT TGGCTACATGAGCTCGCCTTCCTACCTATTATTTTTTTTTTAATCTTGCT TCTACTCAGTGCCCTTCAAAATAGAATAGTGAGTGGGGGTTCCAATGCCT TGGCCAGCGCTTAGCGCATTGTATATATTGTGGATGGGTAGACGTGTAAT GGTGCTTATTGGAGGGTGTAATTAATGCACACTCGCACTCATGTGTATTT TTGTTTTTTTTGTCTGTGTGTGTACACCATATGTAACTCTAGAGCTATGG AGTTGAGCTCTGGGTTGCTGTTACTGTTTCTGACTGTTACGCCTTTTCAT TTTCCAGTTGTCAACTAAGGTTAGGGCACAGGCGAAGACAAAAAAAGGGA TCTTTTTTTTTTTCACCCAGAGACCTTTTGATTTATTTATTTTTACTAGA GGTTAGGGTTGGGGATCAATTGCTACCCATACCATACGGTAAAAAATGCA CACGGCTTTTGCGGGGGGAGGGGGAGGGAGATGGCGATGGGCTGTTTCTT TTTTTCTTTTTTTCAAAGGTGTAGCCTGAATCAATTTTGGAGTAAAGGGG CGGTAGAGAGGAGTTTTTTTTTTTAATGTATCATTTCTGAAAAAATTGGT TCTTACCTGGTGCGGTAGCATTCCCGGTGCACCGCCTGCCATGTACGATC ATTACCTTGCTGTACCGCTTTGCATACTGTGCTGGCGTTTTTTGTAGTAA CTGAGAGTATTTGGAACATGTTTGAGTTGATTTTATTCAAAATATTCAGA AGTGTGTGTGTGTGTTGGTTGGTTTTTAAGGTTCAGGTAATGTTGGTAGG AATAGTGCACTGTCCCTTTTGTCTGTTAAATAGTGTAGTCAGTCCCATCC TATTTGAGTCCCTTCGATGCTCTGTAAACAACTCTTACTTGAAGGTGGTG GAGTCCACGGCGGGGAAGCCCCTACCACTGCTGGTGAAGATTGCACCTGA TTTGAGTGAGGAAGAGAAGGCAGACATTGCCACTGTGGCAATGGAGACAA AGGTGTGTGTGTGTGTTTGTGCATGTATATTGGTTAGTTGGTTGGTTCGT TGGTTGCACATGCTCCTGAAGAGGGTAAAGATGTTTGTAAAGACCCTGAT GTTGTTGATGTCTTCATTCTGATTGGCTTATCCTTTATGTACGGTGCCTG AGGAATGACATCCTCGCCGCTTGATTGGGGGAGGGGGGCATCATTTGACA CACTATGTGTGGTGTTACCACAGTGGGGGTTGTGGTGGAAGTAAGAGTAT TAGTTATTGATTCCAAAGGTATATTTGGCAAAGTAGTATGCTCTTTAGTG GTGTCATCCTGCTCCAGGCACCTTCACATGAAGGGTTAAAACCATGTGTT TAAGAGAGTGAGGTAGAGTATGTGTTTAGTGGTACATTATTTCAAGAACC AGTTCTGGACAAGCATCCAAAGCACATATGTTTTATTTTACACACACACA CACACACACACACACACACACACACACACACACACACACACACACACACA CACAAACTATTTGTTTTTATAAAAAAAGAAAAAGGGAAACAGAGACAAGA TTAAAAAAAAANNNNNNNNNNACATTATTTCAAGAACCAGTTCTGGACAA GCATCCAAAGCACATATGTTTTATTTTACACACACACACACACACACACA AATTATTTTCCCCACCCCTACCCACTCCCTATTCCTGCAATTTCTTTTAT TTGTTGTGTTGTATTGTGTTGTATTGTGCATGTGTCGGGTGCATAAGGTG GATGGTCTGATCGTGTCCAACACAACCATCTCACGTCCAGAAAGTCTTCA AAGTCAGCACGCCAAAGAAGGGGGGGGGCTCAGCGGGGCGCCTCTAAAGG ATTTGTCAACCCAGACTGTGCACGATGTGTACAGACTCACTAAGGGGAAG GTGAAGGGAGGATCGGGTGGGGGGGGGGAGGGGGGGGTTGGGAGGGAGGC GCGAGATCCCCTT
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Coding sequence (CDS) from alignment at C-tenellus_contig9912:367..5729+

>mRNA_C-tenellus_contig9912.1.1 ID=mRNA_C-tenellus_contig9912.1.1|Name=mRNA_C-tenellus_contig9912.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=840bp|location=Sequence derived from alignment at C-tenellus_contig9912:367..5729+ (Choristocarpus tenellus KU2346)
AAGGATGGAGAAGGCGACGACCCCATCCTAGCCACATCCGTAATGGGTAT
GTCCCTGGACAACCCCATCGGGCTGGCTGCGGGTTTTGACAAGCATGCAG
AGGCTGTGGATGGCCTCATAGAAACCGGATTTGGTTTTGTGGAGATCGGG
AGCGTTACCCCGGAGCCTCAGTTGGGAAACCCAAAGCCGAGAATGTTCAG
GTTGAGTGAAGATGAGGGTGTCATCAACCGCTGTGGTTTTAACAGCCATG
GCCTGGCTGCAGTAAGGAAGAGACTAAGTGAACGAGCTGTGAATCCGAGC
CCATTGAGAAAGGGCCTGCTAGGTGTCAATGTGGGGAAGAACAAACTCAG
TGAGGATGCTGCAGCCGACTACTGCCGTGGCATTAGGACTCTGGGCTGCT
ACGGCGACTACCTTGTGGTCAACGTCTCCTCCCCCAACACCCCTGGGCTA
AGGGCACTGCAAAGGCGAGGGGCCATCAAAGACATCATACAAAAGGCCAT
GGAGGCCCGAGATGAGGTGGTGGAGTCCACGGCGGGGAAGCCCCTACCAC
TGCTGGTGAAGATTGCACCTGATTTGAGTGAGGAAGAGAAGGCAGACATT
GCCACTGTGGCAATGGAGACAAAGGTGGATGGTCTGATCGTGTCCAACAC
AACCATCTCACGTCCAGAAAGTCTTCAAAGTCAGCACGCCAAAGAAGGGG
GGGGGCTCAGCGGGGCGCCTCTAAAGGATTTGTCAACCCAGACTGTGCAC
GATGTGTACAGACTCACTAAGGGGAAGGTGAAGGGAGGATCGGGTGGGGG
GGGGGAGGGGGGGGTTGGGAGGGAGGCGCGAGATCCCCTT
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