mRNA_C-tenellus_contig9912.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: D8LB11_ECTSI (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB11_ECTSI) HSP 1 Score: 372 bits (956), Expect = 7.780e-125 Identity = 193/282 (68.44%), Postives = 221/282 (78.37%), Query Frame = 1 Query: 1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSERAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGK-PLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKVKG-GSGGXXXXGVGREARDPL 840 KD DDPILA+ VMG+ NPIGLAAGFDKH EAVDGL++TGFGFVE+GSVTP PQ GNPKPRMFRL EDEGVINRCGFNS GL V++RL +R + R GLLGVNVGKNKLSED++AD+C+GIRTLGCY DYLVVNVSSPNTPGLR LQ AI+ +I AM+ARD+V EST PLPLLVKIAPDL+E EK DIA V + TKVDGLIVSNTT+SRP L+S+ E GGLSG PL +ST+T+ D+YRLTKGKV G GG G G+EA D + Sbjct: 129 KDWTMDDPILASHVMGLRFPNPIGLAAGFDKHGEAVDGLMDTGFGFVEVGSVTPNPQEGNPKPRMFRLEEDEGVINRCGFNSDGLRVVQQRLKKRQASAMNGRAGLLGVNVGKNKLSEDSSADFCKGIRTLGCYADYLVVNVSSPNTPGLRDLQGVKAIRAVILAAMDARDQVCESTGNPMPLPLLVKIAPDLTEREKRDIANVVLSTKVDGLIVSNTTVSRPSYLRSESKGEAGGLSGKPLTKMSTETIRDMYRLTKGKVPLIGVGGV---GTGQEAYDKI 407
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: Q75XR0_EUGGR (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Euglena gracilis TaxID=3039 RepID=Q75XR0_EUGGR) HSP 1 Score: 338 bits (867), Expect = 9.120e-112 Identity = 172/269 (63.94%), Postives = 201/269 (74.72%), Query Frame = 1 Query: 1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSERAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGK---------PLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780 +D D L V G+ NP+GLAAGFDKH EAVD L+ TGFGFVEIG+VTP PQ GNP PRMFRL +D +INR GFNS GLAAVRKRL R P+P R GL+GVNVGKNKL EDAAADY +G+R LG Y DYLV+NVSSPNTPGLR LQ+R A+ D+I+ +M ARDEVV G+ PLPLL+KIAPDL+ EEK DIA V METK+DGLIVSNTT+SRP SL S H + GGLSGAPL+++STQ + D+Y LT+G V Sbjct: 89 RDVHPDPADLEMEVWGLKFSNPLGLAAGFDKHGEAVDALLGTGFGFVEIGTVTPLPQPGNPSPRMFRLEQDRAIINRYGFNSQGLAAVRKRLEARQHRPAP-RGGLVGVNVGKNKLQEDAAADYSKGLRELGPYADYLVINVSSPNTPGLRNLQKRSAMADLIKASMVARDEVVRDADGRRAAAGKSAAPLPLLIKIAPDLTAEEKQDIAEVVMETKIDGLIVSNTTVSRPASLLSPHKGQTGGLSGAPLREMSTQAIRDMYALTRGTV 356
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: A0A7S1JAW3_9EUGL (Dihydroorotate dehydrogenase (quinone), mitochondrial (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JAW3_9EUGL) HSP 1 Score: 333 bits (854), Expect = 1.120e-109 Identity = 170/269 (63.20%), Postives = 202/269 (75.09%), Query Frame = 1 Query: 1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSERAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVE------STAGK---PLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780 +D DDP L V G+ NP+GLAAGFDKHA+A+D L+ TGFGFVE+GSVTP PQ GNP PRMFRL ED GVINR GFNS GLAAVR+RL R P R GL+G+N+GKNK EDAAADY +GI LG YGDYLVVNVSSPNTPGLR LQ+R A+ D+I A ARD+V++ + AGK PLPLL+KIAPD++ +E+ DIA V ++TK+DG++VSNTTI RP SLQS H EGGGLSGAP+K LST + D+Y LTKG V Sbjct: 101 RDPVPDDPALDMQVWGLRFPNPVGLAAGFDKHAQAIDALLATGFGFVEVGSVTPLPQPGNPVPRMFRLVEDRGVINRYGFNSEGLAAVRERLHARQAARPPNR-GLVGINLGKNKEQEDAAADYAQGIAELGPYGDYLVVNVSSPNTPGLRMLQKRSAMADLITSAQRARDQVLQDEDGRRAAAGKGARPLPLLIKIAPDITPDERKDIAEVVLKTKIDGMVVSNTTIGRPPSLQSPHKAEGGGLSGAPVKALSTAVIRDMYALTKGTV 368
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: A0A836CC01_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC01_9STRA) HSP 1 Score: 327 bits (837), Expect = 3.130e-107 Identity = 173/277 (62.45%), Postives = 209/277 (75.45%), Query Frame = 1 Query: 19 DPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSERAVNPSPLRKGLLGVNVGKNK-LSEDAAAD-YCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKVKG-GSGGXXXXGVGREARDPL 840 DPIL T V+G++ N IGLAAG+DK+AEAV+GL++ GFGF+EIG+VTPEPQ GN KPRMFRL ED+ VINRCGFN+HG AV +RL RA KG LGVNVGKNK ++ED AAD YC I+ L YGD++VVNVSSPNTPGLR LQRR AI +I++A +ARD+V T LPLLVKIAPDL+E+EKADIA VA+ ++VDGLIVSNTTI+RP L+S E GGLSGAPL+D ST + D+YRLT GKV G GG G G++A D + Sbjct: 110 DPILQTQVLGLTFPNAIGLAAGYDKNAEAVNGLLDMGFGFIEIGTVTPEPQPGNDKPRMFRLVEDKAVINRCGFNNHGAVAVAERLKARAEAQQGPAKGFLGVNVGKNKWVAEDKAADDYCAAIKALAPYGDFVVVNVSSPNTPGLRLLQRREAIASLIERAADARDQVQVQTKKATLPLLVKIAPDLTEQEKADIAAVALSSRVDGLIVSNTTIARPAGLRSNFKGETGGLSGAPLRDASTAIIADMYRLTGGKVPLIGVGGV---GTGQDAYDKI 383
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: A0A2D4BER9_PYTIN (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BER9_PYTIN) HSP 1 Score: 320 bits (819), Expect = 1.640e-104 Identity = 159/263 (60.46%), Postives = 207/263 (78.71%), Query Frame = 1 Query: 4 DGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSE---RAVNPSPL-RKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780 D + DD IL +V+G NP+G+AAGFDK AEA++GL++ GFGFVEIGSVTP+PQ GNPKPR+FRL+ED VINR GFNS GL +V KRL R N S R G+LGVN+GKNK +EDAAADY G++ LG Y DYLVVNVSSPNTPGLR+LQ + +++++ + + ARDE+V + G+P+PLLVKIAPDL+ ++K DIA VA+ ++DGLIVSNTT+SRPESL+S+H E GGLSGAP+++LSTQ + D+Y+LT G++ Sbjct: 105 DEKTDDEILRVNVLGREFPNPLGMAAGFDKDAEAMEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLTEDRAVINRYGFNSQGLESVAKRLEAYMWRRENLSRWHRAGVLGVNLGKNKTTEDAAADYVEGVKALGKYADYLVVNVSSPNTPGLRSLQGKQQLQELVSRVLTARDELV-AQLGRPIPLLVKIAPDLTADDKKDIADVALALQLDGLIVSNTTLSRPESLKSEHKHETGGLSGAPVRELSTQVLSDMYKLTGGRI 366
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: A0A8K1C5T7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5T7_PYTOL) HSP 1 Score: 314 bits (805), Expect = 2.010e-102 Identity = 156/263 (59.32%), Postives = 205/263 (77.95%), Query Frame = 1 Query: 4 DGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRL----SERAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780 D E D L V+G NP+G+AAGFDK AEA++GL++ GFGFVEIGSVTP+PQ GNPKPR+FRLSED+ VINR GFNS GLA+V RL + R + + R G+LGVN+GKNK +EDAAADY G++TLG + DYLVVNVSSPNTPGLR+LQ + + +++ + + AR+EV E+ G+ +PLLVKIAPDL+E++K DIA VA++ K+DGLIVSNTT+SRP++L+S H E GGLSG P++DLSTQ + D+Y+LT G++ Sbjct: 105 DTEVDPESLRVKVLGREFPNPLGMAAGFDKDAEAMEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLSEDKAVINRYGFNSQGLASVAARLDSYVASRELRSAWHRNGVLGVNLGKNKTTEDAAADYIEGVKTLGRFADYLVVNVSSPNTPGLRSLQGKQQLFELVSRVLTARNEV-ETQEGRKIPLLVKIAPDLTEDDKRDIADVALDLKLDGLIVSNTTLSRPDTLKSVHKGETGGLSGLPVRDLSTQVLGDMYKLTDGQI 366
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: A0A662X2Z7_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2Z7_9STRA) HSP 1 Score: 311 bits (798), Expect = 2.300e-101 Identity = 156/267 (58.43%), Postives = 204/267 (76.40%), Query Frame = 1 Query: 1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSE----RAVNPSP---LRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780 KD + D +LA V G + NP+G+AAGFDK+ EA++G+++ GFG VEIGSVTP+PQ GNPKPR+FRLSED GVINR GFNS GL VR RL + R +P R G+LGVN+GKNK +EDAAADY +G+ LG Y DYLVVNVSSPNTPGLR+LQ + +++++ + +EARDEV S + +PLLVKIAPDL+ ++K DIA VA+ K+DGL+V+NTT+SRP+SL+S EGGGLSG P++DLSTQ + D+Y+LT+GK+ Sbjct: 101 KDDQPDASLLAVDVFGQTFPNPLGIAAGFDKNGEAIEGMLDVGFGCVEIGSVTPKPQPGNPKPRVFRLSEDRGVINRYGFNSKGLDDVRARLEKYVASRETRTAPGQGHRAGVLGVNLGKNKTTEDAAADYVQGVHALGKYADYLVVNVSSPNTPGLRSLQGKQQLQELLVRVLEARDEVAASEK-RAIPLLVKIAPDLTTDDKQDIADVALALKLDGLVVANTTLSRPDSLKSSCKIEGGGLSGLPVRDLSTQVLGDMYKLTEGKI 366
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: W4FYL0_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FYL0_9STRA) HSP 1 Score: 310 bits (795), Expect = 5.770e-101 Identity = 156/266 (58.65%), Postives = 197/266 (74.06%), Query Frame = 1 Query: 1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSE------RAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780 KD DDP L S++G+S DNPIG+AAGFDKHA+A+ GL++ GFGFVEIGSVTP PQ GNPKPR+FRL ED GVINR GFNS G A VR+RL + R+G LGVN+GKNK S+ DY RG+ TLG +GDYLV+N+SSPNTPGLR+LQ + + ++ ++AR+++ K LPLLVKIAPDL+ ++ DIA VA+ ++DGLIVSNTTISRPESL S HA E GGLSGAP+K+LST +H +Y+LT+GK+ Sbjct: 93 KDTVPDDPSLHVSLLGLSFDNPIGIAAGFDKHADAMQGLLDMGFGFVEIGSVTPLPQDGNPKPRVFRLVEDRGVINRYGFNSQGHAKVRERLEKYKYWTLSTTTSKQYRRGPLGVNLGKNKSSDSPIEDYVRGVETLGPFGDYLVINISSPNTPGLRSLQGKKELHALVSAVLDARNKL-----WKRLPLLVKIAPDLTSDDMRDIAEVALALQIDGLIVSNTTISRPESLLSPHAAETGGLSGAPVKELSTTVLHSMYKLTEGKI 353
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: H3GAQ0_PHYRM (Dihydroorotate dehydrogenase (quinone), mitochondrial n=17 Tax=Phytophthora TaxID=4783 RepID=H3GAQ0_PHYRM) HSP 1 Score: 308 bits (788), Expect = 7.340e-101 Identity = 153/267 (57.30%), Postives = 205/267 (76.78%), Query Frame = 1 Query: 1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGL----AAVRKRLSERAVNPSP---LRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780 KD E D +L +G+ NP+G+AAGFDK AEA++G+++ GFG VEIGSVTP+PQ GNPKPR+FRL ED GVINR GFNS GL A + + ++ERAV +P R G+LGVN+GKNKL+EDAAADY +G+ LG Y DYLVVNVSSPNTPGLR LQ + ++ ++ + ++ARDEV + + +PLLVKIAPDL++++K DIA VA+E K+DGL+VSNTT+SRP++LQ + E GGLSG P++DLST+ + D+Y+LTKG++ Sbjct: 27 KDPEDDPELLRVRTLGLQFPNPLGIAAGFDKDAEAMEGMLDMGFGCVEIGSVTPQPQPGNPKPRVFRLYEDRGVINRYGFNSKGLEHAGARLHEYVAERAVRTAPGNGHRAGVLGVNLGKNKLTEDAAADYVQGVHALGQYADYLVVNVSSPNTPGLRTLQGKLQLQQLLVRVIKARDEVA-TQEKRDIPLLVKIAPDLTQDDKQDIADVALELKLDGLVVSNTTLSRPDTLQGEAKGETGGLSGLPVRDLSTKVLGDMYKLTKGQI 292
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Match: K3WLG9_GLOUD (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLG9_GLOUD) HSP 1 Score: 310 bits (795), Expect = 8.310e-101 Identity = 153/264 (57.95%), Postives = 201/264 (76.14%), Query Frame = 1 Query: 1 KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGSVTPEPQLGNPKPRMFRLSEDEGVINRCGFNSHGLAAVRKRLSE----RAVNPSPLRKGLLGVNVGKNKLSEDAAADYCRGIRTLGCYGDYLVVNVSSPNTPGLRALQRRGAIKDIIQKAMEARDEVVESTAGKPLPLLVKIAPDLSEEEKADIATVAMETKVDGLIVSNTTISRPESLQSQHAKEGGGLSGAPLKDLSTQTVHDVYRLTKGKV 780 +D D +L+ G NP+G+AAGFDK+AEA++GL++ GFGFVEIGSVTP+PQ GNPKPR+FRL+ED GVINR GFNS G+ AV K L R ++ R G+LGVN+GKNK +EDAAADY G+ TLG Y DYLVVNVSSPNTPGLR+LQ + +++++ + ++AR V E+ + +PLLVKIAPDL+E++K DIA VA+E +DGLIVSNTT+SRP++L+S H E GGLSGAP++DLSTQ + D+Y+LT G + Sbjct: 111 RDHGTDSLVLSVKAFGQEFPNPLGMAAGFDKNAEAIEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLTEDRGVINRYGFNSSGMDAVAKSLESYVTTRELSKRFHRSGVLGVNLGKNKTTEDAAADYVEGVYTLGKYADYLVVNVSSPNTPGLRSLQGKQQLQELLTRVLDARKNV-EAKENRKIPLLVKIAPDLTEDDKKDIADVAVELNLDGLIVSNTTLSRPDTLKSSHKIETGGLSGAPVRDLSTQVLSDMYKLTNGMI 373 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9912.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9912.1.1 >prot_C-tenellus_contig9912.1.1 ID=prot_C-tenellus_contig9912.1.1|Name=mRNA_C-tenellus_contig9912.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=280bp KDGEGDDPILATSVMGMSLDNPIGLAAGFDKHAEAVDGLIETGFGFVEIGback to top mRNA from alignment at C-tenellus_contig9912:367..5729+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9912.1.1 ID=mRNA_C-tenellus_contig9912.1.1|Name=mRNA_C-tenellus_contig9912.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5363bp|location=Sequence derived from alignment at C-tenellus_contig9912:367..5729+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9912:367..5729+ >mRNA_C-tenellus_contig9912.1.1 ID=mRNA_C-tenellus_contig9912.1.1|Name=mRNA_C-tenellus_contig9912.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=840bp|location=Sequence derived from alignment at C-tenellus_contig9912:367..5729+ (Choristocarpus tenellus KU2346)back to top |