mRNA_C-tenellus_contig9893.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9893.1.1 vs. uniprot
Match: D8LQC5_ECTSI (Similar to oral cancer overexpressed 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC5_ECTSI) HSP 1 Score: 108 bits (271), Expect = 5.150e-28 Identity = 58/128 (45.31%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 MFDDIVLLDERFVAEGKAAGRTEXXXXXXXXXXXXXXXXXXXXXXXVGFYQSCCMSWLAFPTRFTDFFPTFSDKALGTMKALVKLADGIPRDNCRDAKVLQDTQRIRAKFRAVTAMVGFLVVFNPEGQ 384 MFDDIVLLD+R VAEGK AGR + + F + CC++WL+ + D FP FS+KAL +M+A+V LA+ +PR N ++A Q QR+RA+FRAVT+MVG VVF+ +GQ Sbjct: 2 MFDDIVLLDDRMVAEGKDAGREDGRARGFKEGEGMGRGKGFQTAAEMSFCRGCCLAWLSMHAQDPDKFP-FSEKALASMRAVVTLAESVPRVNTQEATAAQTAQRVRARFRAVTSMVGLPVVFDSKGQ 128
BLAST of mRNA_C-tenellus_contig9893.1.1 vs. uniprot
Match: A0A8H7S6W5_9FUNG (Yae1_N domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S6W5_9FUNG) HSP 1 Score: 51.2 bits (121), Expect = 1.550e-5 Identity = 30/124 (24.19%), Postives = 49/124 (39.52%), Query Frame = 1 Query: 7 DDIVLLDERFVAEGKAAGRTEXXXXXXXXXXXXXXXXXXXXXXXVGFYQSCCMSWLAFPTRFTDFFPTFSDKALGTMKALVKLADGIPRDNCRDAKVLQDTQRIRAKFRAVTAMVGFLVVFNPE 378 + +V L+E F G G + +GFY C +W + D S K L ++ L K+ D PRDNC + + ++ AK + +T+++G FN E Sbjct: 10 ESLVYLEEMFQQYGHEDGLRDGKDSGVLEGRIFGCEKSFELGREIGFYDGCAKTWKKLAEQHPD---KISSKVLKNIQTLQKMIDEFPRDNCPNTDMFAARDKMAAKMKVITSLLGVSQKFNME 130
BLAST of mRNA_C-tenellus_contig9893.1.1 vs. uniprot
Match: A0A507DS60_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DS60_9FUNG) HSP 1 Score: 51.6 bits (122), Expect = 1.830e-5 Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 7 DDIVLLDERFVAEGKAAGRTEXXXXXXXXXXXXXXXXXXXXXXXVGFYQSCCMSWLAFPTRFT---DFFPT-------FSDKALGTMKALVKLADGIPRDNCRDAKVLQDTQRIRAKFRAVTAMVG 354 DD+V L++ F G+ G XXXXXXXXXXXXXXXXXXXXXXX+GFY+S C +WL R T P+ +S +A+ +K +++L D PR+N D + + +RIRA++R T+++G Sbjct: 22 DDLVHLEDMFEELGRDDGXXXXXXXXXXXXXXXXXXXXXXXXXXIGFYKSACTTWLQLAERSTFSAQSAPSSSADSTSYSARAIKVLKGIIELCDLFPRENTPDTEWKESLERIRARWRMATSLLG 147
BLAST of mRNA_C-tenellus_contig9893.1.1 vs. uniprot
Match: A0A3Q3G1C1_9LABR (Protein LTO1 homolog n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3G1C1_9LABR) HSP 1 Score: 50.4 bits (119), Expect = 3.130e-5 Identity = 52/117 (44.44%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 1 MFDDIVLLDERFVAEGKAAGRTEXXXXXXXXXXXXXXXXXXXXXXXVGFYQSCCMSWLAFPTRFTDFFPTFSDKALGTMKALVKLADGIPRDNCRDAKVLQDTQRIRAKFRAVTAMV 351 +FD IV+ DERF EG XXXXXXXXXXXXXXXXXX + FY ++W TD S K L ++AL+ L P+D+ AK+ +D +R+RAKFR V +M+ Sbjct: 10 LFDSIVMADERFRGEGYREXXXXXXXXXXXXXXXXXXXXXXKLSSEISFYYGFAITWKCLLQHNTD---VKSRKRLKAVEALLGLIQKSPQDDPASAKIQEDVERLRAKFRQVCSMM 123
BLAST of mRNA_C-tenellus_contig9893.1.1 vs. uniprot
Match: W7TQX1_9STRA (Essential protein Yae1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX1_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 5.310e-5 Identity = 61/144 (42.36%), Postives = 78/144 (54.17%), Query Frame = 1 Query: 7 DDIVLLDERFVAEGKAAGRTEXXXXXXXXXXXXXXXXXXXXXXXVGFYQSCCMSWL----------------------AFPTRFTDFFPTFSDKALGTMKALVKLADGIPRDNCRDAKVLQDTQRIRAKFRAVTAMVGFLVVFN 372 D +V LDE + EG XXXXXXXXXXXXXXXXXXXXXXX+GFY++C +WL A D T +A+ T++ ++KL PR N D + QR+RAKFRAVT+M+G V F+ Sbjct: 16 DAVVHLDETWYQEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGFYKACSQTWLFVIKDSITGEGEKGRSKEFGEIAAAKAMMD--TTAVHRAIRTLEGIIKLVQDFPRQNVADVDMAAHVQRLRAKFRAVTSMLGVSVKFS 157
BLAST of mRNA_C-tenellus_contig9893.1.1 vs. uniprot
Match: UPI001BEB872E (protein LTO1 homolog n=1 Tax=Chelmon rostratus TaxID=109905 RepID=UPI001BEB872E) HSP 1 Score: 49.7 bits (117), Expect = 6.120e-5 Identity = 52/124 (41.94%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 1 MFDDIVLLDERFVAEGKAAGRTEXXXXXXXXXXXXXXXXXXXXXXXVGFYQSCCMSWLAFPTRFTDFFPTFSDKALGTMKALVKLADGIPRDNCRDAKVLQDTQRIRAKFRAVTAMVGFLVVFN 372 +FD I++ +ERF EG XXXXXXXXXXXXXXXXXXX + FY ++W TD KALG++ L++ + P D+ + AK+ +D +++RAKFR V AM+ FN Sbjct: 10 LFDSIIMAEERFRGEGYREXXXXXXXXXXXXXXXXXXXXXXXLSTEISFYYGFAITWKCLLRHNTDLKSRKRMKALGSLLGLIQNS---PHDDPQSAKLQEDMEKLRAKFRQVCAMLSVPTDFN 130 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9893.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9893.1.1 >prot_C-tenellus_contig9893.1.1 ID=prot_C-tenellus_contig9893.1.1|Name=mRNA_C-tenellus_contig9893.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=128bp MFDDIVLLDERFVAEGKAAGRTEGKSRGFKEGEGLGRAKGFSVGAEVGFYback to top mRNA from alignment at C-tenellus_contig9893:1196..1765+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9893.1.1 ID=mRNA_C-tenellus_contig9893.1.1|Name=mRNA_C-tenellus_contig9893.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=570bp|location=Sequence derived from alignment at C-tenellus_contig9893:1196..1765+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9893:1196..1765+ >mRNA_C-tenellus_contig9893.1.1 ID=mRNA_C-tenellus_contig9893.1.1|Name=mRNA_C-tenellus_contig9893.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=384bp|location=Sequence derived from alignment at C-tenellus_contig9893:1196..1765+ (Choristocarpus tenellus KU2346)back to top |