mRNA_C-tenellus_contig9891.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Match: A0A6H5K5Z3_9PHAE (MSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z3_9PHAE) HSP 1 Score: 226 bits (576), Expect = 5.620e-65 Identity = 125/245 (51.02%), Postives = 150/245 (61.22%), Query Frame = 1 Query: 1 YELIAESCIPGIQTTDWRSIFEEQSVISSLTDALNER--------------------------------QQGTEVCFVEEGKVFSFGSVVSSQNPAGVCERFKISNNNKIPCTV---------------------TDKDVGNRNDE-----GGADASAFVVQPEVWEIPPHEHRYVSTYFRPTEMRSYRAKFDATVANNDSEPSTGRLEFLLAGKGTMPTVTLEKPIDRDQTGAVMMNFGEVRLR 561 Y+L+AESC+PGI T+DWR IFEEQSVI SL D +++ + G VCF E +F+FGSVVSSQ P G+CERFKISN+NKIPCTV K G + E G AD +AF V PE W+IPPHEHRYVS YFRPTEMRSYR F+A V++ND + STG+L FLL+GKGTMPTVTLE P+DRDQ+GAV+M+FGEV R Sbjct: 3788 YDLLAESCVPGIVTSDWRDIFEEQSVIPSLADVMDDDWAAAAXXXXXXXXXXXXXXXXXXXXXXXXAGGRAGGRVCFAIEQLMFTFGSVVSSQVPVGICERFKISNSNKIPCTVKFAISPAAGPNDSDPAPMDPKAKKGKGGKAAEEEPAPGEADVTAFAVHPETWDIPPHEHRYVSAYFRPTEMRSYRCHFEAVVSDND-DASTGKLGFLLSGKGTMPTVTLESPLDRDQSGAVIMDFGEVCAR 4031
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Match: D7FJY6_ECTSI (Hydrocephalus-inducing protein, Hydin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY6_ECTSI) HSP 1 Score: 224 bits (571), Expect = 2.640e-64 Identity = 124/245 (50.61%), Postives = 150/245 (61.22%), Query Frame = 1 Query: 1 YELIAESCIPGIQTTDWRSIFEEQSVISSLTDALNER--------------------------------QQGTEVCFVEEGKVFSFGSVVSSQNPAGVCERFKISNNNKIPCTV---------------------TDKDVGNRNDE-----GGADASAFVVQPEVWEIPPHEHRYVSTYFRPTEMRSYRAKFDATVANNDSEPSTGRLEFLLAGKGTMPTVTLEKPIDRDQTGAVMMNFGEVRLR 561 Y+L+AESC+PGI T+DWR IFEEQSVI SL D +++ + G VCF E +F+FGSVVSSQ P G+CERFKISN+NKIPCTV K G + E G AD +AF V PE W+IPPHEHRYVS YFRPTEMRSYR +F+A V++ND + STG+L FLL+GKGTMPTVTLE P+ RDQ+GAV+M+FGEV R Sbjct: 3653 YDLLAESCVPGIVTSDWRDIFEEQSVIPSLADVMDDDWAAAAXXXXXXXXXXXXXXXXXXXXXXXXAGGRAGGRVCFAIEQLMFTFGSVVSSQVPVGICERFKISNSNKIPCTVKFAISPAAGPNDSDPAPVDPKAKKGKGGKAAEEEPAPGEADVAAFAVHPEAWDIPPHEHRYVSAYFRPTEMRSYRCQFEAVVSDND-DASTGKLSFLLSGKGTMPTVTLESPLVRDQSGAVIMDFGEVCAR 3896
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Match: A0A7S3Y384_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y384_HETAK) HSP 1 Score: 167 bits (424), Expect = 1.950e-46 Identity = 108/239 (45.19%), Postives = 134/239 (56.07%), Query Frame = 1 Query: 1 YELIAESCIPGIQTTDWRSIFEEQSVISSLTD----ALNERQQ----GTEVCFVEEGKVFSFGSVVSSQNPAGV-------CERFKISNNNKIPCTVT-------DKDVGNR-------------------------NDEGGA------DASAFVVQPEVWEIPPHEHRYVSTYFRPTEMRSYRAKFDATVANNDSEPSTGRLEFLLAGKGTMPTVTLEKPIDRDQTGAVMMNFGEVRL 558 YE++ ESC PGI +DWRSIFEEQ+VI S+ + A +E+ + T+V F E ++FSFGSVV PAG CERFKISN N+I V D G + +GGA DA AF VQP EIPPHEHRYVS YF P EMRSYRA+F ATV ++ +P+ RL+F LAGKGT+P VTLEKP+D D G V ++FG + L Sbjct: 52 YEMVGESCEPGIGRSDWRSIFEEQAVIPSVAEGFAGAASEKAKKDLMATQVFFAEAERLFSFGSVVCQ--PAGATDKAKANCERFKISNPNRIAARVGFAVGVPGAADAGGAXXXXXXXXXXXXXXXXXXXXXXXXADSKGGAGAGAEGDAGAFTVQPAALEIPPHEHRYVSVYFHPGEMRSYRAQFTATVEDHP-DPAASRLQFQLAGKGTLPCVTLEKPLDLDGDGKVTVDFGALGL 287
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Match: A0A8J5IVY9_9STRA (ASH domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IVY9_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.100e-42 Identity = 94/201 (46.77%), Postives = 122/201 (60.70%), Query Frame = 1 Query: 1 YELIAESCIPGIQTTDWRSIFEEQSVISSL------------TDALNERQQGTEVCFVEEGKVFSFGSVVSSQNPAGVCERFKISNNNKIPCTVTDKDVGNRNDEGGADASAFVVQPEVWEIPPHEHRYVSTYFRPTEMRSYRAKFDATVANNDSEPSTGR----LEFLLAGKGTMPTVTLEKPIDRDQTGAVMMNFGEVR 555 YELI ESC PGI TTD+ SIFEEQ+VI SL T +L+ Q V F E+ K+FSFG ++++ N G ERFKISN K+ TV + + E + AF VQP VWEIPP EHR+VS YFRP+ + + A F A V +DS P + LEF + G+GTMP VT+ +P RD TGA++++FG VR Sbjct: 2060 YELIGESCYPGINTTDYESIFEEQTVIHSLGVDSATRMSSLRTSSLSSSIQA--VTFAEKEKMFSFGPLIAAANWKGTVERFKISNPMKVSSTVRFSIASSSSGESEGGSPAFTVQPAVWEIPPLEHRFVSVYFRPSTIALFHATFRAIV--DDSPPQSSAVDKLLEFEMRGEGTMPCVTVTEPTVRDSTGALVVDFGRVR 2256
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Match: A0A329SJT7_9STRA (Hydrocephalus-inducing n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SJT7_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.120e-42 Identity = 94/201 (46.77%), Postives = 122/201 (60.70%), Query Frame = 1 Query: 1 YELIAESCIPGIQTTDWRSIFEEQSVISSL------------TDALNERQQGTEVCFVEEGKVFSFGSVVSSQNPAGVCERFKISNNNKIPCTVTDKDVGNRNDEGGADASAFVVQPEVWEIPPHEHRYVSTYFRPTEMRSYRAKFDATVANNDSEPSTGR----LEFLLAGKGTMPTVTLEKPIDRDQTGAVMMNFGEVR 555 YELI ESC PGI TTD+ SIFEEQ+VI SL T +L+ Q V F E+ K+FSFG ++++ N G ERFKISN K+ TV + + E + AF VQP VWEIPP EHR+VS YFRP+ + + A F A V +DS P + LEF + G+GTMP VT+ +P RD TGA++++FG VR Sbjct: 3002 YELIGESCYPGINTTDYESIFEEQTVIRSLGVDSATRMSSLRTSSLSSSIQA--VTFAEKEKMFSFGPLIAAANWKGTVERFKISNPMKVSSTVQFSIASSSSGESEGGSPAFTVQPAVWEIPPLEHRFVSVYFRPSTIALFHATFRAIV--DDSPPQSSAVDKLLEFEMRGEGTMPCVTVTEPTVRDSTGALVVDFGRVR 3198
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Match: W2PLM0_PHYPN (ASH domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PLM0_PHYPN) HSP 1 Score: 161 bits (407), Expect = 2.890e-42 Identity = 95/203 (46.80%), Postives = 124/203 (61.08%), Query Frame = 1 Query: 1 YELIAESCIPGIQTTDWRSIFEEQSVISSL-----TDALNERQQGTE-----VCFVEEGKVFSFGSVVSSQNPAGVCERFKISNNNKIPCTV----TDKDVGNRNDEGGADASAFVVQPEVWEIPPHEHRYVSTYFRPTEMRSYRAKFDATVANNDSEPSTGR----LEFLLAGKGTMPTVTLEKPIDRDQTGAVMMNFGEVR 555 YELI ESC PGI TTD+ SIFEEQ+V+ SL T + R+ V F E+ K+FSFG ++++ N G ERFKISN K+ CTV T G EGG+ AF VQP VWEIPP EHR+V+ YFRP+ + + A F A V +DS P + LEF + G+GTMP VT+ +P RD +GA++++FG VR Sbjct: 2995 YELIGESCYPGINTTDYESIFEEQTVVRSLGVDSATPMPSLRKAPLSGSIQAVTFAEKEKIFSFGPLIAAANWKGTVERFKISNPMKVSCTVQFSITSSSSGAGESEGGS--PAFTVQPSVWEIPPLEHRFVNVYFRPSTIALFHAMFKAVV--DDSPPQSNMADKLLEFEMRGEGTMPCVTVTEPTVRDSSGAMVLDFGRVR 3193
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Match: A0A833WHV2_PHYIN (ASH domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WHV2_PHYIN) HSP 1 Score: 160 bits (405), Expect = 3.160e-42 Identity = 94/203 (46.31%), Postives = 123/203 (60.59%), Query Frame = 1 Query: 1 YELIAESCIPGIQTTDWRSIFEEQSVISSL--------TDALNERQQGTE--VCFVEEGKVFSFGSVVSSQNPAGVCERFKISNNNKIPCTV----TDKDVGNRNDEGGADASAFVVQPEVWEIPPHEHRYVSTYFRPTEMRSYRAKFDATVANNDSEPSTG----RLEFLLAGKGTMPTVTLEKPIDRDQTGAVMMNFGEVR 555 YELI ESC PGI TTD+ SIFEEQ+VI SL + + G V F E+ K+FSFG ++++ N G ERFKISN K+ TV T+ G+ E G+ AF+VQP VWEIPP EHR+VS YFRP + +RA F+A V +DS P + LEF + G+GTMP V + +P RD +G +M++FG VR Sbjct: 573 YELIGESCYPGINTTDYESIFEEQTVICSLGVESVTPMSSLRSSSYHGNAQAVTFAEKEKIFSFGPLIAAANWKGTVERFKISNPMKVSSTVQFSITNGSTGSTESENGS--PAFIVQPAVWEIPPLEHRFVSVYFRPATIALFRATFNAVV--DDSPPQSNVADKLLEFEMRGEGTMPCVLITEPTARDSSGTMMLDFGRVR 771
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Match: A0A833SDN9_PHYIN (ASH domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SDN9_PHYIN) HSP 1 Score: 160 bits (405), Expect = 5.090e-42 Identity = 94/203 (46.31%), Postives = 123/203 (60.59%), Query Frame = 1 Query: 1 YELIAESCIPGIQTTDWRSIFEEQSVISSL--------TDALNERQQGTE--VCFVEEGKVFSFGSVVSSQNPAGVCERFKISNNNKIPCTV----TDKDVGNRNDEGGADASAFVVQPEVWEIPPHEHRYVSTYFRPTEMRSYRAKFDATVANNDSEPSTG----RLEFLLAGKGTMPTVTLEKPIDRDQTGAVMMNFGEVR 555 YELI ESC PGI TTD+ SIFEEQ+VI SL + + G V F E+ K+FSFG ++++ N G ERFKISN K+ TV T+ G+ E G+ AF+VQP VWEIPP EHR+VS YFRP + +RA F+A V +DS P + LEF + G+GTMP V + +P RD +G +M++FG VR Sbjct: 532 YELIGESCYPGINTTDYESIFEEQTVICSLGVESVTPMSSLRSSSYHGNAQAVTFAEKEKIFSFGPLIAAANWKGTVERFKISNPMKVSSTVQFSITNGSTGSTESENGS--PAFIVQPAVWEIPPLEHRFVSVYFRPATIALFRATFNAVV--DDSPPQSNVADKLLEFEMRGEGTMPCVLITEPTARDSSGTMMLDFGRVR 730
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Match: D0NZY4_PHYIT (Ig-like domain-containing protein n=4 Tax=Phytophthora infestans TaxID=4787 RepID=D0NZY4_PHYIT) HSP 1 Score: 160 bits (405), Expect = 5.340e-42 Identity = 94/203 (46.31%), Postives = 123/203 (60.59%), Query Frame = 1 Query: 1 YELIAESCIPGIQTTDWRSIFEEQSVISSL--------TDALNERQQGTE--VCFVEEGKVFSFGSVVSSQNPAGVCERFKISNNNKIPCTV----TDKDVGNRNDEGGADASAFVVQPEVWEIPPHEHRYVSTYFRPTEMRSYRAKFDATVANNDSEPSTG----RLEFLLAGKGTMPTVTLEKPIDRDQTGAVMMNFGEVR 555 YELI ESC PGI TTD+ SIFEEQ+VI SL + + G V F E+ K+FSFG ++++ N G ERFKISN K+ TV T+ G+ E G+ AF+VQP VWEIPP EHR+VS YFRP + +RA F+A V +DS P + LEF + G+GTMP V + +P RD +G +M++FG VR Sbjct: 2369 YELIGESCYPGINTTDYESIFEEQTVICSLGVESVTPMSSLRSSSYHGNAQAVTFAEKEKIFSFGPLIAAANWKGTVERFKISNPMKVSSTVQFSITNGSTGSTESENGS--PAFIVQPAVWEIPPLEHRFVSVYFRPATIALFRATFNAVV--DDSPPQSNVADKLLEFEMRGEGTMPCVLITEPTARDSSGTMMLDFGRVR 2567
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Match: A0A6A4ALJ1_9STRA (Hydrocephalus-inducing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4ALJ1_9STRA) HSP 1 Score: 159 bits (403), Expect = 9.950e-42 Identity = 96/206 (46.60%), Postives = 124/206 (60.19%), Query Frame = 1 Query: 1 YELIAESCIPGIQTTDWRSIFEEQSVISSL--------TDALNERQQGT--EVCFVEEGKVFSFGSVVSSQNPAGVCERFKISNNNKIPCTVTDKDVGNRNDEG--GADAS-----AFVVQPEVWEIPPHEHRYVSTYFRPTEMRSYRAKFDATVANNDSEPSTGR----LEFLLAGKGTMPTVTLEKPIDRDQTGAVMMNFGEVR 555 YEL+ ESC PGI TTD+ SIFEEQ+V+ SL + N G+ V F E+ K+FSFG ++++ N G ERFKI N K+ CTV V + + G G D S AF VQP VWEIPP EHR+VS YFRPT + + A F A V +DS P + LEF + G+GTMP VT+ +P DRD GA++++FG VR Sbjct: 2972 YELVGESCYPGINTTDYESIFEEQTVVRSLGVESAMPSSTLRNGVFPGSIQAVTFAEKEKIFSFGPLIAAANWKGTVERFKICNPMKVSCTVQFSIVTSPSSSGASGEDESEEGSQAFTVQPAVWEIPPLEHRFVSVYFRPTTIALFHATFRAEV--DDSPPQSNLADRLLEFEMRGEGTMPCVTVTEPTDRDSAGALVLDFGRVR 3175 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9891.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9891.1.1 >prot_C-tenellus_contig9891.1.1 ID=prot_C-tenellus_contig9891.1.1|Name=mRNA_C-tenellus_contig9891.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=194bp YELIAESCIPGIQTTDWRSIFEEQSVISSLTDALNERQQGTEVCFVEEGKback to top mRNA from alignment at C-tenellus_contig9891:743..2639+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9891.1.1 ID=mRNA_C-tenellus_contig9891.1.1|Name=mRNA_C-tenellus_contig9891.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1897bp|location=Sequence derived from alignment at C-tenellus_contig9891:743..2639+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9891:743..2639+ >mRNA_C-tenellus_contig9891.1.1 ID=mRNA_C-tenellus_contig9891.1.1|Name=mRNA_C-tenellus_contig9891.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=582bp|location=Sequence derived from alignment at C-tenellus_contig9891:743..2639+ (Choristocarpus tenellus KU2346)back to top |