mRNA_C-tenellus_contig989.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig989.1.1
Unique NamemRNA_C-tenellus_contig989.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Match: A0A6H5K6Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Q8_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 2.500e-137
Identity = 202/256 (78.91%), Postives = 227/256 (88.67%), Query Frame = 1 
Query:    1 MRRRGVGVGAVKRKEKDTQAFEAVGKKAAEENLAHISDMMDTFKGSLEDFARKYKKNINQDPAFRQQFQVMCTSIGVDPLASTKGFWAEVLGVGDFYYELAVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQPELSQDDVRRATSKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEATGRVTEAEVVERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGKPAYYFPSLWQGEGLL 768
            MRRRGVGVGAVKRKEK+ +AFEAVGK+ AEENL+HIS MM TFKGSLE+FARKYKK+INQDPAFRQQFQVMC SIGVDPLAS KGFWAEVLGVGDFYYELAVQIVE+C+ TRSVNGGLM+LPELLQRL+AKG  ++ Q E+S DDVRRATSKL VLGSGF +LE+GKT MVVSVPRELS DHS++LLLAEA+GR+TEA++ E L W+  R R VL EL+QEGMAWVDGDGAGP  GGG G+PAY+FPSLW GE LL
Sbjct:    1 MRRRGVGVGAVKRKEKNKEAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQ-EISADDVRRATSKLQVLGSGFALLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEELQWEGGRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGRPAYFFPSLWHGERLL 255
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BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Match: D8LQG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG3_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 1.140e-118
Identity = 182/257 (70.82%), Postives = 207/257 (80.54%), Query Frame = 1 
Query:   55 QAFEAVGKKAAEENLAHISDMMDTFKGSLEDFARKYKKNINQDPAFRQQFQVMCTSIGV-------------------DPLASTKGFWAEVLGVGDFYYELAVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQPELSQDDVRRATSKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEATGRVTEAEVVERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGKPAYYFPSLWQGEGLL 768
            QAFEAVGK+ AEENL+HIS MM TFKGSLE+FARKYKK+INQDPAFRQQFQVMC SIG                    D     +GFWAEVLGVGDFYYELAVQIVE+C+ TRSVNGGLM+LPELLQRL+AKG  ++ Q E+S DDVRRATSKL VLGSGF +LE+GKT MVVSVPRELS DHS++LLLAEA+GR+TEA++ E+L W+  R R VL EL+QEGMAWVDGDGAGP  GGG G+PAY+FPSLWQGE LL
Sbjct:    6 QAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGCERGRGKERDIARGVEGAKRDRDMHNRGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQ-EISTDDVRRATSKLQVLGSGFSVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLQWEGGRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGRPAYFFPSLWQGERLL 261
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BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Match: A0A835YIN3_9STRA (EAP30/Vps36 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN3_9STRA)

HSP 1 Score: 291 bits (744), Expect = 9.860e-96
Identity = 158/278 (56.83%), Postives = 190/278 (68.35%), Query Frame = 1 
Query:    1 MRRRGVGVGAVKRKEKDTQAFEAVGKKAAEENLAHISDMMDTFKGSLEDFARKYKKNINQDPAFRQQFQVMCTSIG----------------------VDPLASTKGFWAEVLGVGDFYYELAVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQPELSQDDVRRATSKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEATGRVTEAEVVERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGKPAYYFPSLWQGEGLL 768
            MRRRGVGV AVK + ++  AFE VG+ AA EN+AH+   ++TFKG LEDFARKYKK+INQDPAFRQQFQ MC SIG                      +DPLAS KGFWAEVLGVGDFYYELAVQI E+CI TR  NGGLM+L ELLQRL+A  R  +  P +S DD++RA +KL VLG GF ++EVGKT MV+SVPRELS D S++L  AE +G  +   +   L W +DRAR  L  L Q+GMAWVD    G       G+P ++FPSLW+GE LL
Sbjct:    1 MRRRGVGVAAVKHRAREKDAFEVVGQAAAAENMAHVQATLETFKGHLEDFARKYKKSINQDPAFRQQFQTMCASIGGMGKGRHGALREQCRPHNCASHLDPLASNKGFWAEVLGVGDFYYELAVQITEVCIATRETNGGLMALQELLQRLRA--RRSKKSPAISLDDIKRAIAKLKVLGRGFALVEVGKTQMVLSVPRELSNDASAVLQAAEGSGHASVRALCVGLSWTQDRARRALTALAQDGMAWVDEQAPG-------GEPLFFFPSLWKGEHLL 269
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BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Match: W7TGH7_9STRA (EAP30 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGH7_9STRA)

HSP 1 Score: 253 bits (646), Expect = 4.970e-81
Identity = 134/254 (52.76%), Postives = 184/254 (72.44%), Query Frame = 1 
Query:    7 RRGVGVGAVKRKEKDTQAFEAVGKKAAEENLAHISDMMDTFKGSLEDFARKYKKNINQDPAFRQQFQVMCTSIGVDPLASTKGFWAEVLGVGDFYYELAVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQPELSQDDVRRATSKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEAT-GRVTEAEVVERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGKPAYYFPSLWQGEGL 765
            RRG GV ++KRKE+  +AF ++GK+  EEN+ H++ +M TFK SLEDFARK+KK+IN +P  R +F  MC  IGVDPLAS KGFWA++LGVGDFYYELAVQI+EIC+ TRS+NGGL+ L +L QR+Q    +RR   ++S +D++ A +K+ +LG+GF +L+ GKT +VVSVP ELS DH++IL +A+A+   VT  E+V++L W   R R  L  ++Q GMAW+D  GA         +  Y+FPSLW+ EGL
Sbjct:    2 RRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQ----KRRKVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGS------REVYWFPSLWE-EGL 244
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BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Match: A0A7S2W3J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3J7_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.160e-78
Identity = 128/251 (51.00%), Postives = 174/251 (69.32%), Query Frame = 1 
Query:    1 MRRRGVGVGAVKRKEKDTQAFEAVGKKAAEENLAHISDMMDTFKGSLEDFARKYKKNINQDPAFRQQFQVMCTSIGVDPLASTKGFWAEVLGVGDFYYELAVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQPELSQDDVRRATSKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEA-TGRVTEAEVVERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGKPAYYFPSLW 750
            MRRRGVGVG VK +EK T+ ++ +G +  ++ + H ++++  F+  LEDFA KYK +I  DP FR++FQ MC  IGVDPLAS KG W E+LGVGDFYYEL VQI+EICI TRS NGGL+S+ +LL++L+      R   E+S DDV+R+ SKL  LGSGF +L+VG+T MV+SVP EL+RDHS++L +A+   G+VT   V + LGW  DRA   L  ++ EGMAW+D           +G  +Y+F S+W
Sbjct:    7 MRRRGVGVGRVKNREKQTEKYKQLGAELQDDRVKHATEVLGQFRTQLEDFAEKYKSSIRSDPVFRKEFQDMCMEIGVDPLASNKGLWGELLGVGDFYYELGVQIIEICIRTRSSNGGLISMRDLLRKLRKDSNRSRQ--EVSSDDVKRSVSKLKKLGSGFSLLQVGRTTMVLSVPVELNRDHSAVLEVAQRHAGQVTLDGVQKELGWAEDRATRALERMVTEGMAWIDRH---------KGTTSYWFLSVW 246
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BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Match: A0A067BX53_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BX53_SAPPC)

HSP 1 Score: 244 bits (622), Expect = 1.200e-77
Identity = 134/253 (52.96%), Postives = 176/253 (69.57%), Query Frame = 1 
Query:    1 MRRRGVGVGAVKRKEKDTQAFEAVGKKAAEENLAHISDMMDTFKGSLEDFARKYKKNINQDPAFRQQFQVMCTSIGVDPLASTKGFWAEVLGVGDFYYELAVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQPELSQDDVRRATSKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEAT-GRVTEAEVVERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGKPAYYFPSLWQG 756
            MRR  +G+GAVK K++  +A+E VG +  + +LAH+   +D FK +LE FA KYK  I +DPAFR +FQVMC+ IGVDPLAS KGFW+E+L +GDFYYEL VQI+E+CI TR  NGGL+ + ELL RL  K R  R Q  +S+DD++R+  KL VLG GFQ++E+G   M+V+VP ELS+DHS+ILLLA+ T G VT A + E+L WD +R+   L  L++E M WVD    G         PAYYFPS+  G
Sbjct:    1 MRRGKMGIGAVKWKQEQKKAYEEVGTQLTQSHLAHVQAQLDVFKTNLEAFAVKYKAQIKKDPAFRMRFQVMCSKIGVDPLASQKGFWSELLDMGDFYYELGVQIIEVCILTRPKNGGLIPIHELL-RLLDKKRGLRMQ-RISEDDIKRSVKKLKVLGEGFQVIELGAKTMIVTVPVELSQDHSAILLLAQETQGMVTTALLAEKLLWDVNRSTIALNVLLRESMVWVDDQNPG--------APAYYFPSIAMG 243
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BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Match: A0A1V9Z6I4_9STRA (Vacuolar sorting protein SNF8 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6I4_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.490e-77
Identity = 133/253 (52.57%), Postives = 176/253 (69.57%), Query Frame = 1 
Query:    1 MRRRGVGVGAVKRKEKDTQAFEAVGKKAAEENLAHISDMMDTFKGSLEDFARKYKKNINQDPAFRQQFQVMCTSIGVDPLASTKGFWAEVLGVGDFYYELAVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQPELSQDDVRRATSKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEAT-GRVTEAEVVERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGKPAYYFPSLWQG 756
            MRR  +G+GAVK K++  +A+E VG +  E +LAH+ + +D FK +L+ FA KYK  I +D  FRQ+FQVMC+ IGVDPLAS KGFW+E+L +GDFYYEL VQI+E+CI TR  NGGL+S+ ELL  L AK R    Q ++SQDD++R+  KL VLG GFQ++E+G   M+V+VP ELS+DHSSILLLA+ T G VT   + E+LGWD +R+   L  L++E M W+D              PAYYFPS+  G
Sbjct:    1 MRRGKMGIGAVKWKQEQKKAYEEVGTQLNESHLAHVQEQLDVFKTNLQAFAIKYKSQIKKDAEFRQRFQVMCSKIGVDPLASQKGFWSELLDMGDFYYELGVQIIEVCIVTRPKNGGLISIQELLTLL-AKKRGPLMQ-KISQDDIKRSVKKLRVLGEGFQVIELGSKTMIVTVPVELSQDHSSILLLAQETQGIVTTTLLAEKLGWDVNRSNIALNVLLRESMVWIDEQNPN--------VPAYYFPSIVMG 243
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BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Match: A0A485LB62_9STRA (Aste57867_17359 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB62_9STRA)

HSP 1 Score: 244 bits (622), Expect = 2.600e-77
Identity = 128/250 (51.20%), Postives = 176/250 (70.40%), Query Frame = 1 
Query:    1 MRRRGVGVGAVKRKEKDTQAFEAVGKKAAEENLAHISDMMDTFKGSLEDFARKYKKNINQDPAFRQQFQVMCTSIGVDPLASTKGFWAEVLGVGDFYYELAVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQPELSQDDVRRATSKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEATGRVTEAEVV-ERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGKPAYYFPSL 747
            MRR  +G+GAVK K++  +A+E VG +  + +LAH+ + +D FK +L+ FA KYK  I +DP FR++FQVMC  IGVDPLAS KGFW+E+L +GDFYYELAVQI+E+CI TR+ NGGL+++ +LL  L A  R      ++S DD++R+  KL VLG GF ++E+G   M+V+VP ELS+DHSSILLLA+ T  V    V+ E+LGWD +R+   L  L++EGM W+D D +G         PAYYFPS+
Sbjct:   18 MRRGKMGIGAVKWKQEQKKAYEEVGAQLEQNHLAHVQEQLDVFKTNLQTFAVKYKSQIKKDPEFRKRFQVMCAKIGVDPLASQKGFWSELLDMGDFYYELAVQIIEVCIRTRNKNGGLIAIQDLLTLLDA--RRGPMMQKISDDDIKRSVKKLKVLGEGFNVIELGAKTMIVTVPVELSQDHSSILLLAQETQGVVSVPVLAEKLGWDSNRSSIALNVLLKEGMVWID-DQSGK-------YPAYYFPSM 257
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BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Match: A0A6G0XBH3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBH3_9STRA)

HSP 1 Score: 242 bits (617), Expect = 6.640e-77
Identity = 129/260 (49.62%), Postives = 180/260 (69.23%), Query Frame = 1 
Query:    1 MRRRGVGVGAVKRKEKDTQAFEAVGKKAAEENLAHISDMMDTFKGSLEDFARKYKKNINQDPAFRQQFQVMCTSIGVDPLASTKGFWAEVLGVGDFYYELAVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQP---ELSQDDVRRATSKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEATGRV-TEAEVVERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGK-PAYYFPSLWQGEGL 765
            MRR  +G+GAVK K++  +A+E VG +  + +LAH+ + ++ FK +L+ FA KYK  I +DP FR++FQVMC  IGVDPLAS KGFW+E+L +GDFYYELAVQI+E+CI TR+ NGGL+++ +LL  L     ++R  P   ++S DD++R+  KL VLG GF ++E+G   M+V+VP ELS+DHSSILLLA+ T  V T   + E+LGWD +R+   L  L++EGM W+D            GK PAYYFPS+  G G+
Sbjct:    1 MRRTKMGIGAVKWKQEQKKAYEEVGAQLTQSHLAHVQEQLEVFKTNLQTFAVKYKSQIKRDPEFRKRFQVMCAKIGVDPLASQKGFWSELLDMGDFYYELAVQIIEVCILTRNKNGGLIAIQDLLALL-----DQRRGPSMQKISDDDIKRSVKKLKVLGEGFNVIELGAKTMIVTVPVELSQDHSSILLLAQETQSVVTIKTLAEKLGWDANRSSLALNVLLREGMVWIDEH---------NGKTPAYYFPSIAMGNGI 246
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BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Match: W4GXJ6_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXJ6_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.220e-76
Identity = 129/253 (50.99%), Postives = 178/253 (70.36%), Query Frame = 1 
Query:    1 MRRRGVGVGAVKRKEKDTQAFEAVGKKAAEENLAHISDMMDTFKGSLEDFARKYKKNINQDPAFRQQFQVMCTSIGVDPLASTKGFWAEVLGVGDFYYELAVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQP---ELSQDDVRRATSKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEAT-GRVTEAEVVERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGKPAYYFPSL 747
            MRR  +G+GAVK K+   +A+E VG +  + +L H+ + +  FK +L+ FA KYK  I +DP FR++FQVMC  IGVDPLAS KGFW+E+L +GDFYYELAVQI+E+CI TR+ NGGL+++ +LL  L     ++R  P   ++S DD++R+  KL VLG GF ++E+G   M+V+VP ELS+DHSSILLLA+ T G VT A + +RLGWD +R+   L  L++EGM W+DG   G + G G    AYYFPS+
Sbjct:    1 MRRGKMGIGAVKWKQDQKKAYEEVGAQLTQNHLTHVQEQLQVFKTNLQTFAVKYKSQIKKDPEFRKRFQVMCAKIGVDPLASQKGFWSELLDMGDFYYELAVQIIEVCILTRNKNGGLIAIQDLLALL-----DQRRGPMMQKISDDDIKRSVKKLKVLGEGFNVIELGMKTMIVTVPVELSQDHSSILLLAQDTQGVVTVATLADRLGWDANRSTLALNVLLREGMVWLDG---GDQNGSGA---AYYFPSI 242
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig989.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6Q8_9PHAE2.500e-13778.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQG3_ECTSI1.140e-11870.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIN3_9STRA9.860e-9656.83EAP30/Vps36 family-domain-containing protein n=1 T... [more]
W7TGH7_9STRA4.970e-8152.76EAP30 family protein n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S2W3J7_9STRA1.160e-7851.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A067BX53_SAPPC1.200e-7752.96Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A1V9Z6I4_9STRA2.490e-7752.57Vacuolar sorting protein SNF8 n=1 Tax=Thraustothec... [more]
A0A485LB62_9STRA2.600e-7751.20Aste57867_17359 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XBH3_9STRA6.640e-7749.62Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4GXJ6_9STRA1.220e-7650.99Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig989contigC-tenellus_contig989:1424..6528 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LQG3
Preferred nameSNF8
PFAMsEAP30
Model size768
Max annot lvl2759|Eukaryota
KEGG koko:K12188
KEGG Pathwayko04144,map04144
KEGG ModuleM00410
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000429,GO:0000430,GO:0000433,GO:0000578,GO:0000741,GO:0000742,GO:0000746,GO:0000747,GO:0000814,GO:0003002,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005737,GO:0005768,GO:0005770,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006403,GO:0006508,GO:0006511,GO:0006605,GO:0006623,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006914,GO:0006996,GO:0006997,GO:0007032,GO:0007034,GO:0007154,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007350,GO:0007351,GO:0007389,GO:0007584,GO:0008022,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008298,GO:0008358,GO:0008593,GO:0008595,GO:0009056,GO:0009057,GO:0009605,GO:0009790,GO:0009798,GO:0009880,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009948,GO:0009952,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0009994,GO:0010008,GO:0010256,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010796,GO:0010797,GO:0010941,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016247,GO:0016482,GO:0016604,GO:0017157,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023057,GO:0030154,GO:0030163,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032511,GO:0032535,GO:0032879,GO:0032991,GO:0033036,GO:0033365,GO:0033620,GO:0034613,GO:0035282,GO:0036257,GO:0036258,GO:0036452,GO:0042058,GO:0042059,GO:0042176,GO:0042221,GO:0042493,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0043067,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043328,GO:0043632,GO:0043900,GO:0043903,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044764,GO:0045013,GO:0045014,GO:0045022,GO:0045184,GO:0045324,GO:0045450,GO:0045732,GO:0045892,GO:0045921,GO:0045934,GO:0045990,GO:0046015,GO:0046618,GO:0046907,GO:0046983,GO:0047485,GO:0048284,GO:0048468,GO:0048469,GO:0048471,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051036,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051503,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0055037,GO:0060255,GO:0060627,GO:0060810,GO:0060811,GO:0061635,GO:0061919,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0090066,GO:0097708,GO:0098588,GO:0098772,GO:0098796,GO:0098805,GO:0098927,GO:1901184,GO:1901185,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:1903530,GO:1903532,GO:1903541,GO:1903543,GO:1903772,GO:1903900,GO:1904669,GO:1990904,GO:2000112,GO:2000113,GO:2001141
Exons6
Evalue1.86e-119
EggNOG OGsKOG3341@1|root,KOG3341@2759|Eukaryota
Ec32 ortholog descriptionWinged helix-turn-helix DNA-binding domain
Ec32 orthologEc-10_005530.1
Descriptionprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
Cds size768
COG categoryK
BRITEko00000,ko00001,ko00002,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig989.1.1prot_C-tenellus_contig989.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig989 1424..6528 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790206.059929-CDS-C-tenellus_contig989:1423..14801680790206.059929-CDS-C-tenellus_contig989:1423..1480Choristocarpus tenellus KU2346CDSC-tenellus_contig989 1424..1480 +
1680790206.0749228-CDS-C-tenellus_contig989:1563..17331680790206.0749228-CDS-C-tenellus_contig989:1563..1733Choristocarpus tenellus KU2346CDSC-tenellus_contig989 1564..1733 +
1680790206.0845528-CDS-C-tenellus_contig989:1982..21211680790206.0845528-CDS-C-tenellus_contig989:1982..2121Choristocarpus tenellus KU2346CDSC-tenellus_contig989 1983..2121 +
1680790206.0947435-CDS-C-tenellus_contig989:3254..33711680790206.0947435-CDS-C-tenellus_contig989:3254..3371Choristocarpus tenellus KU2346CDSC-tenellus_contig989 3255..3371 +
1680790206.1076775-CDS-C-tenellus_contig989:4564..47411680790206.1076775-CDS-C-tenellus_contig989:4564..4741Choristocarpus tenellus KU2346CDSC-tenellus_contig989 4565..4741 +
1680790206.120744-CDS-C-tenellus_contig989:6420..65281680790206.120744-CDS-C-tenellus_contig989:6420..6528Choristocarpus tenellus KU2346CDSC-tenellus_contig989 6421..6528 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig989.1.1

>prot_C-tenellus_contig989.1.1 ID=prot_C-tenellus_contig989.1.1|Name=mRNA_C-tenellus_contig989.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=256bp
MRRRGVGVGAVKRKEKDTQAFEAVGKKAAEENLAHISDMMDTFKGSLEDF
ARKYKKNINQDPAFRQQFQVMCTSIGVDPLASTKGFWAEVLGVGDFYYEL
AVQIVEICINTRSVNGGLMSLPELLQRLQAKGRERRHQPELSQDDVRRAT
SKLAVLGSGFQILEVGKTAMVVSVPRELSRDHSSILLLAEATGRVTEAEV
VERLGWDRDRARGVLRELIQEGMAWVDGDGAGPEGGGGEGKPAYYFPSLW
QGEGLL
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mRNA from alignment at C-tenellus_contig989:1424..6528+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig989.1.1 ID=mRNA_C-tenellus_contig989.1.1|Name=mRNA_C-tenellus_contig989.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5105bp|location=Sequence derived from alignment at C-tenellus_contig989:1424..6528+ (Choristocarpus tenellus KU2346)
ATGCGACGACGTGGGGTGGGAGTGGGGGCTGTGAAGAGGAAGGAAAAAGA
TACGCAGGTAAATCTGAAAGTTGATCTACCTGCTCATGGTAGAACGCAAC
ACTTGTTCAAGAGTTCCAACCCTTGTCTTCCAAAGAACAGGCTTTTGAAG
CTGTGGGAAAGAAGGCGGCTGAAGAGAACTTGGCTCACATCTCGGATATG
ATGGATACTTTTAAGGGGAGCCTCGAAGATTTTGCGCGGAAATACAAGAA
AAATATCAATCAGGACCCTGCCTTTCGTCAGCAGTTCCAGGTCATGTGTA
CTAGTATTGGGTAAGTTCCCGTTTGCACTATTCAAACCTAGCATAGCGAA
ATGTGGCAGGTCCCATACATAGTGAAGGGTTAGAAGTAGAATTTTCCCAC
CACGACCATTGTATGTTGTTGTCCCGATAATAACTCGACGGTGTTCTTAT
CTCTTTGACCTCTTCTGTCTAATGATATTGTTTTGGAGCCTTGAGCCATT
CTATCTTGGTCCACCCTGCTGTGCCTCTCTTATATCTTACACCCGCTTCT
GGATTGCAGTGTAGACCCTTTGGCATCAACTAAGGGTTTCTGGGCGGAGG
TGCTTGGTGTTGGCGACTTCTACTACGAGCTAGCGGTCCAGATTGTGGAG
ATATGCATAAACACGCGTTCAGTGAATGGGGGGCTGATGTCTCTTCCGGT
GCGTGTGTGGACATGATAGCAGTTGTAAGGAGATGACAAGCATTGCACCT
TTCCAAGAGGACGGCCGAGATGTAGCCGGGATGAGGAAGTTGCGGGAATA
GGGGGAGTAGAGATGCGAGACATTCAGGCTGCGGCTGAAGTCCTTCGATG
CCTATGTAAGGTTGGCTAGTGCGTTCATCTTTGGGATTTTTGACATTCAT
CCGTTCACAGGGTCAGATGAGATTCTCTATGTTAATTTTTTTCGTCCAAT
CCTAGGGGCATCGCAATGGTTCTGCATGAAACTACTCCATGCTATTTGCA
ACACTTTGGTCAAGGGATTTGTTGTAGGAAGATATATATCACTTCTACAT
CTTTCAACTGGGGTGTATCACACTCAGGGGTTTATCAACAGATACCCACA
GCACCATTTTTCGCTTGCATTTTTTCGTAAAAATCAGGAAGTATGTAATG
TTAAACCATTCGCAGAGACCTCATCCTATGAGGGTTTCAGTGTCTGCATT
CTCCGAGTCTAGTACACATCCGTGTTACTCTTAAGTACACATGAATGAGT
TGTGCAACAAAGGGAGTTGTGTATTACCATGGAATTCAAATACTTTGATT
AATAGATTGAAAATGTCCTCCTTTAACTGTCTGGGGGGTATGTGACTCTT
TGCGATGGTAGGGTGGGCGGTAGGTTGACATTGGTTGCTTTCCAATCAAA
TCTGTGTTGTGCACCCATCTAGTAAGTGGATCTTTTACTGTGGACCTTGC
AGGTTGTCTAGTAGTAGTGGAGATAGAGTTTGATGTGTACTGAAGTGACA
CAGCCATTGCCAGTGGCAGGATATCTTCTGTGTCCCATATTCTGTCTACA
TGTTCTAATTGTTTGTCACTTGTCATGACTTCTGAAAAATTGCTTCGGCA
CATTCACTTGTCCATTCCTCTAGTTCCAAGAAAGCACAATCACACTTATG
CAGACACACACACACACTTGCACATGTAAACGTCCAACAGTTAGTCATTC
CAATCTTGCTGTTTTGCTGATTGCTCATACCTCACACAGTACCAATCCTC
CTTCCCCAAACTCACTCCCCAAGCCAAACGTACATTTGGTTTGACCTTTT
CTCCTCACCTCTCTGATTCCTCTTCTTTCAGGAATTGCTTCAACGCCTCC
AAGCAAAGGGACGTGAAAGGCGCCACCAGCCAGAGCTGTCTCAGGATGAT
GTCCGTCGAGCGACTTCCAAGCTGGCGGTGCTCGGAAGTGGCTTTCAAGT
GAGAACAGACTATGGTAGTTGTCTGTTCATGCGTGACAGGGTTTGTACTT
TGGGAGAATCAAAAGTTAAATTTGTGATTGAAGTTCTACGTTAGGGTGTG
AGGGAAGGAGGCGATTTGTTGTGCAGAGAGCATGTGTGGAATGGTGGGGG
AAGGGGGCGGGGAGAGTTTTACGGTAGTGCTTGAAGTGTGACACACGTTT
TAGAAGCACCGCAGTATTGAGACCAAGGTAGAGTTTGACAAGGGAGGGAG
GTGGCGTCCAGTTTTATGAAAAGTTTATTTGCCGACCTGGGGTGCTTCTT
TGATCGTAGAGACTTGCATTATCCTCTTGAAAGGGAGAATGGATACATTA
CCGCAGAAGTCCATTGTTGCTGTGCCCCCCTCTGGTTGTGTTAATCTGGC
CTGAACAAACCACATGCTTGTTCTATTCCAGTTTGTGTGAATACAAGCTA
CTATGTGTCTAACGGATTGGTTCACTTGAACTTGTAATTTTTATGCTGAG
GCAGAGTGTTCTTGGTTGTTTTTGTGGTTCTCAGCAGTAGTTATGGCATG
GGATTTTTTTGACAATACCTTAAGGCTCAGATTGTGAGGGCTCTGTATTG
ATTTCTTTGTTGTTGCTTTTTCTCTTCTCAATTTATCGTGATGCCCTATA
CTGTGTGTTAATTTATTGTGGGATACCATATGAGTTTCAATCTTGAGTTG
ATGAAAACGTTTGTGAGAGATGATGTAGGGGGGTGGAAAGAGGGGACTTT
CACTTTTTAATGATGTTTGTTACTTGTCCCTCTACATTGAAGTCCAAGTT
GGACATTAAGGTGAGGTTGAAGTTGAAGGTGAAGGTGATAGTAGCTGTTC
CCATCTTTTGCTCACTACCCTTGCTTTGCTCATTCCCCTTCTTCCCCCCC
CCCACCTGTTTGGAAGAATACTGGCAGTTCACACACCTCATACTCTCTTT
TGTCACCATCAATGTAGCTGAACCTTACCTGTGTTTTACGAATGAACCAT
CATATTTAGGGAACTGCTGGGTCTACTTTGATTAACTCGAACACCTCCTT
GTTATGCTACAGCTTCAATACAGAAGGCATCGTTGACATGTACTAGTGTG
AGATGTGCAATTGATATCTTCACAATCCAACAACTTTTGAAATCCCATCC
AAGTTGGAAAAAAAAGAACCTGTGTGGGGATGTGTTCGCAGATCCTTGAA
GTGGGCAAGACAGCCATGGTGGTTTCTGTGCCCAGAGAGCTCAGCCGAGA
TCATTCTTCAATCCTCTTGTTGGCTGAGGCAACAGGCCGGGTGACGGAAG
CTGAGGTTGTGGAGAGATTGGGGTGGGACCGTGATCGGGCTCGTGGGGTG
CTGAGAGAGCTCATTCAGGTGCTTGTTTTTTTTTTGGGCTGGACCTCTCT
TTTTGGAAAAGTGCATGTTCTGATGGTGATAATATGATACTTTGGTCCCA
AAGATGTCAAATGCCCAGCATACCTGAGGCCCATGCCTACTAGGAATGCC
TTCCCAGATATATGGAATACCGTGTATGCTTATGCCTCACATGTCTCCTC
AGTCTACAATATTGTTGCAAGAAAAGCTGTTTGAGTGCTTGAGAGGATGC
CATATTATATGTGCAATTTGATTCGTAAATTATTTTCCTTTTTGATGATA
TTTTCGATCACTGACTTTGATTGTATGCTAAAGAGTGAATATTTTCAGAT
GTATATTGTTGATTGGTGCTATGTACTGGGCATTGCAAGCAGACGCAGCC
AGAAAACGTGTGCTGGGGGGCCAAACCCAGGTTTAAACAGTGGACAAACG
ACATCTTTCGTTGGACCTGATAAGTTTTTTTGTTTGTGTTGGAAGTCATG
TACGAAAAAAGCTAACTGCAAAAATGTTCTGAATTTCTCTACGCAGGAAG
TAGGAAATACCTTGTGACATCTTTTCCTAGTGCTGGAACTGCCGAAAATG
TCTTCCATCCTTTGGTCTATCGCTATCCCCCCCCCCCCACTCCCCATTCC
CCACTCCCCATACATATATATAGTAGATATAGAGGTATGTCATAATCCAT
GGGCCATCACCTCATCAATTGCACACCCTCCCCGAATGGTCCATCTCAAT
GTTTGTGCTTCGCATGGAGCCCGTGCTGCTGACAATCAGATGTTTGGCGA
TTTTCTGCCCTGATAGGATGGTCCTATGTCAATTTTTTACTAGGTACATT
GCTCCATTTTCATGTTTTTTTTTCTATGGTTTCCCTGACACCTCATAATG
CTGAATTTCCAAATCAGATATATCCCCCAGCCCTCAAGATGACCCACCCC
GAGTGTCACCTGGAGTTCAACCTGTTGATTTTTTTCCCTTAATGGGTATA
TAGAAGTTAAGGACAGGAATTGACATCATTTGAGTCTAGAGATTAAAATA
AAAGTCTTGCCTTATTGTGTGTGAAATGGCGACAAAACCCCCCCCCTCAG
TCAAAGTCGACTGCCCTCTAAATTGAACATCTTTTGCCAGCTTTGAGTGC
AAGAGTCTTGTTTGGGTCACATCCGGTCTTTAGCTTTGTATCACACAGTA
GCCTAGGAATGTATGTAACCTATCACCCAGGAAGACCTTTCTCTTGTGAT
CTCGTGGGCAAGTGCTTTTTGAGTAGTTTCGATGAATCGGGATGCTTGAG
ATTGGCTGCCCAAGGATATGGGGCTGCTCCTCTGGGGTGGGTTTGTATTC
TACATTCTGCACCATCCCGCCCTATGGTCTCAAGCAACTTGGAGCCTTAA
AGAGTTGGTCAAGGTTTCCAAATGTTTCGGATAGAATATGGCACAGTGTG
CTTCATATCTTGGGAAATCCTACTGAAGGTACGGCATATTGAAGGTATGA
GTGGATAAATAACCTGGGCTATCATAGCTTTGAATACATTTACAAAAAAA
ATGTTTTCTCTGGCTTACTCCGAGATTTTTCTTATTATGTAATAACCATA
AAACCTTGGATACCCTCTTCTTGTACATCATATGTTCCCCCATTCTGCTT
TCCTTCCTCCCCTATTCTCTCTCCTCTTTGTATTTGATTTTTCTCAGGAG
GGTATGGCATGGGTCGATGGCGACGGGGCAGGGCCTGAGGGTGGGGGAGG
GGAGGGGAAGCCAGCATACTACTTTCCAAGTCTATGGCAGGGGGAGGGGT
TGCTG
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Coding sequence (CDS) from alignment at C-tenellus_contig989:1424..6528+

>mRNA_C-tenellus_contig989.1.1 ID=mRNA_C-tenellus_contig989.1.1|Name=mRNA_C-tenellus_contig989.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=768bp|location=Sequence derived from alignment at C-tenellus_contig989:1424..6528+ (Choristocarpus tenellus KU2346)
ATGCGACGACGTGGGGTGGGAGTGGGGGCTGTGAAGAGGAAGGAAAAAGA
TACGCAGGCTTTTGAAGCTGTGGGAAAGAAGGCGGCTGAAGAGAACTTGG
CTCACATCTCGGATATGATGGATACTTTTAAGGGGAGCCTCGAAGATTTT
GCGCGGAAATACAAGAAAAATATCAATCAGGACCCTGCCTTTCGTCAGCA
GTTCCAGGTCATGTGTACTAGTATTGGTGTAGACCCTTTGGCATCAACTA
AGGGTTTCTGGGCGGAGGTGCTTGGTGTTGGCGACTTCTACTACGAGCTA
GCGGTCCAGATTGTGGAGATATGCATAAACACGCGTTCAGTGAATGGGGG
GCTGATGTCTCTTCCGGAATTGCTTCAACGCCTCCAAGCAAAGGGACGTG
AAAGGCGCCACCAGCCAGAGCTGTCTCAGGATGATGTCCGTCGAGCGACT
TCCAAGCTGGCGGTGCTCGGAAGTGGCTTTCAAATCCTTGAAGTGGGCAA
GACAGCCATGGTGGTTTCTGTGCCCAGAGAGCTCAGCCGAGATCATTCTT
CAATCCTCTTGTTGGCTGAGGCAACAGGCCGGGTGACGGAAGCTGAGGTT
GTGGAGAGATTGGGGTGGGACCGTGATCGGGCTCGTGGGGTGCTGAGAGA
GCTCATTCAGGAGGGTATGGCATGGGTCGATGGCGACGGGGCAGGGCCTG
AGGGTGGGGGAGGGGAGGGGAAGCCAGCATACTACTTTCCAAGTCTATGG
CAGGGGGAGGGGTTGCTG
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