mRNA_C-tenellus_contig9848.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9848.1.1
Unique NamemRNA_C-tenellus_contig9848.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Match: A0A6H5JYC7_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC7_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 3.130e-31
Identity = 60/76 (78.95%), Postives = 70/76 (92.11%), Query Frame = 2 
Query: 1247 QVILVGDVHGCHDEMVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLAVRGNHDNFVLSA 1474
            +VI+VGD+HGC+ EMV+LLERCGYR+G +EDRERFSVVL GDLVNKGP S +V+RTAREEGFLAVRGNHDNF L+A
Sbjct:   85 EVIVVGDIHGCYGEMVSLLERCGYRLGNKEDRERFSVVLAGDLVNKGPGSVDVVRTAREEGFLAVRGNHDNFALAA 160
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BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Match: A0A084SKV9_9DELT (Metallophosphatase n=3 Tax=Archangium TaxID=47 RepID=A0A084SKV9_9DELT)

HSP 1 Score: 90.1 bits (222), Expect = 5.970e-17
Identity = 46/74 (62.16%), Postives = 52/74 (70.27%), Query Frame = 2 
Query: 1247 QVILVGDVHGCHDEMVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLAVRGNHDNFVL 1468
            + + +GDVHGC +E+ ALL  CGYR G R       VVLVGDLV KGP SA V+R ARE GFLAVRGNHD  VL
Sbjct:    3 RTLFIGDVHGCAEELDALLHACGYRRGER-------VVLVGDLVAKGPDSAGVVRRAREHGFLAVRGNHDEHVL 69
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BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Match: A0A2T4VNU1_VITXG (Metallophosphatase n=1 Tax=Vitiosangium sp. (strain GDMCC 1.1324) TaxID=2138576 RepID=A0A2T4VNU1_VITXG)

HSP 1 Score: 88.6 bits (218), Expect = 1.890e-16
Identity = 45/74 (60.81%), Postives = 52/74 (70.27%), Query Frame = 2 
Query: 1247 QVILVGDVHGCHDEMVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLAVRGNHDNFVL 1468
            + + +GDVHGC +E+ ALL  CGYR G R       VVLVGDLV KGP SA V+R ARE+G LAVRGNHD  VL
Sbjct:    3 RTLFIGDVHGCAEELDALLRECGYRQGDR-------VVLVGDLVAKGPDSAGVVRRAREQGMLAVRGNHDEHVL 69
[Close]
BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Match: S9PC14_9DELT (Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=4 Tax=Cystobacter TaxID=42 RepID=S9PC14_9DELT)

HSP 1 Score: 87.8 bits (216), Expect = 3.660e-16
Identity = 45/74 (60.81%), Postives = 52/74 (70.27%), Query Frame = 2 
Query: 1247 QVILVGDVHGCHDEMVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLAVRGNHDNFVL 1468
            + + +GDVHGC +E+ ALLE CG+R G R       VVLVGDLV KGP SA V+R ARE G LAVRGNHD  VL
Sbjct:    3 RTLFIGDVHGCAEELDALLEECGHRPGDR-------VVLVGDLVAKGPDSAGVVRRARERGMLAVRGNHDEHVL 69
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BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Match: R1C2Y5_EMIHU (Metallophos domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C2Y5_EMIHU)

HSP 1 Score: 85.5 bits (210), Expect = 6.140e-16
Identity = 44/76 (57.89%), Postives = 51/76 (67.11%), Query Frame = 2 
Query: 1247 QVILVGDVHGCHDEMVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLAVRGNHDNFVLSA 1474
            + ILVGDVHGC DE+ +LL+ CG+      D     VVLVGDLVNKGP SAE +  ARE GF  VRGNHD+  L A
Sbjct:   37 RTILVGDVHGCLDELKSLLQACGF------DASTDHVVLVGDLVNKGPHSAETVAYARESGFACVRGNHDDAALFA 106
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BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Match: UPI001F297D89 (metallophosphoesterase n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F297D89)

HSP 1 Score: 87.0 bits (214), Expect = 6.920e-16
Identity = 45/74 (60.81%), Postives = 52/74 (70.27%), Query Frame = 2 
Query: 1247 QVILVGDVHGCHDEMVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLAVRGNHDNFVL 1468
            + + +GDVHGC  E+ ALL  CG+R G R       VVLVGDLV KGP SA V+R ARE+GFLAVRGNHD  VL
Sbjct:    2 RTLFIGDVHGCAQELDALLAACGWRRGER-------VVLVGDLVAKGPDSAGVVRRAREQGFLAVRGNHDAHVL 68
[Close]
BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Match: UPI00193B9ED6 (metallophosphoesterase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI00193B9ED6)

HSP 1 Score: 86.3 bits (212), Expect = 1.210e-15
Identity = 45/74 (60.81%), Postives = 50/74 (67.57%), Query Frame = 2 
Query: 1247 QVILVGDVHGCHDEMVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLAVRGNHDNFVL 1468
            + I +GDVHGC +E+ ALL  C YR G R       VVLVGDLV KGP SA V+R ARE G LAVRGNHD  VL
Sbjct:    3 RTIFIGDVHGCAEELEALLRECDYRPGDR-------VVLVGDLVAKGPDSAGVVRLARERGLLAVRGNHDEHVL 69
[Close]
BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Match: UPI00195018B9 (metallophosphoesterase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI00195018B9)

HSP 1 Score: 85.9 bits (211), Expect = 1.640e-15
Identity = 45/74 (60.81%), Postives = 51/74 (68.92%), Query Frame = 2 
Query: 1247 QVILVGDVHGCHDEMVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLAVRGNHDNFVL 1468
            + I +GDVHGC +E+ ALLE CGYR G R       VVLVGDLV KGP SA V+R AR+   LAVRGNHD  VL
Sbjct:    3 RTIFIGDVHGCAEELDALLEECGYRKGDR-------VVLVGDLVAKGPDSAGVVRRARKRRLLAVRGNHDEHVL 69
[Close]
BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Match: A0A848LJY5_9DELT (Serine/threonine protein phosphatase n=7 Tax=Myxococcaceae TaxID=31 RepID=A0A848LJY5_9DELT)

HSP 1 Score: 84.7 bits (208), Expect = 4.390e-15
Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 2 
Query: 1247 QVILVGDVHGCHDEMVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLAVRGNHDNFVL 1468
            + + +GDVHGC +E+ ALL  CG+R    +DR    VVLVGDLV KGP SA V+R ARE GFLAVRGNHD  VL
Sbjct:    2 RTLFIGDVHGCAEELDALLSECGWRP---DDR----VVLVGDLVAKGPDSAGVVRRARERGFLAVRGNHDAHVL 68
[Close]
BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Match: R1ELE4_EMIHU (Metallophos domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ELE4_EMIHU)

HSP 1 Score: 85.5 bits (210), Expect = 7.770e-15
Identity = 44/76 (57.89%), Postives = 51/76 (67.11%), Query Frame = 2 
Query: 1247 QVILVGDVHGCHDEMVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLAVRGNHDNFVLSA 1474
            + ILVGDVHGC DE+ +LL+ CG+      D     VVLVGDLVNKGP SAE +  ARE GF  VRGNHD+  L A
Sbjct:   55 RTILVGDVHGCLDELKSLLQACGF------DASTDHVVLVGDLVNKGPHSAETVAYARESGFACVRGNHDDAALFA 124
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9848.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYC7_9PHAE3.130e-3178.95Metallophos domain-containing protein n=1 Tax=Ecto... [more]
A0A084SKV9_9DELT5.970e-1762.16Metallophosphatase n=3 Tax=Archangium TaxID=47 Rep... [more]
A0A2T4VNU1_VITXG1.890e-1660.81Metallophosphatase n=1 Tax=Vitiosangium sp. (strai... [more]
S9PC14_9DELT3.660e-1660.81Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=... [more]
R1C2Y5_EMIHU6.140e-1657.89Metallophos domain-containing protein (Fragment) n... [more]
UPI001F297D896.920e-1660.81metallophosphoesterase n=1 Tax=Myxococcus stipitat... [more]
UPI00193B9ED61.210e-1560.81metallophosphoesterase n=1 Tax=Archangium violaceu... [more]
UPI00195018B91.640e-1560.81metallophosphoesterase n=1 Tax=Archangium violaceu... [more]
A0A848LJY5_9DELT4.390e-1560.81Serine/threonine protein phosphatase n=7 Tax=Myxoc... [more]
R1ELE4_EMIHU7.770e-1557.89Metallophos domain-containing protein n=1 Tax=Emil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9848contigC-tenellus_contig9848:150..2432 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1242864.D187_002571
PFAMsMetallophos,Metallophos_2
Model size1474
Max annot lvl28221|Deltaproteobacteria
KEGG koko:K07313
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.23e-13
EggNOG OGsCOG0639@1|root,COG0639@2|Bacteria,1RD8M@1224|Proteobacteria,42RQP@68525|delta/epsilon subdivisions,2WNQ7@28221|Deltaproteobacteria,2YVU0@29|Myxococcales
EC3.1.3.16
DescriptionDiadenosine tetraphosphatase and related serine threonine protein phosphatases
Cds size186
COG categoryT
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790204.2955976-CDS-C-tenellus_contig9848:149..2391680790204.2955976-CDS-C-tenellus_contig9848:149..239Choristocarpus tenellus KU2346CDSC-tenellus_contig9848 150..239 -
1680790204.3081083-CDS-C-tenellus_contig9848:1048..11441680790204.3081083-CDS-C-tenellus_contig9848:1048..1144Choristocarpus tenellus KU2346CDSC-tenellus_contig9848 1049..1144 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790204.318668-UTR-C-tenellus_contig9848:1144..24321680790204.318668-UTR-C-tenellus_contig9848:1144..2432Choristocarpus tenellus KU2346UTRC-tenellus_contig9848 1145..2432 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9848.1.1prot_C-tenellus_contig9848.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9848 150..1144 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9848.1.1

>prot_C-tenellus_contig9848.1.1 ID=prot_C-tenellus_contig9848.1.1|Name=mRNA_C-tenellus_contig9848.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=62bp
MVALLERCGYRVGRREDRERFSVVLVGDLVNKGPKSAEVIRTAREEGFLA
VRGNHDNFVLSA
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mRNA from alignment at C-tenellus_contig9848:150..2432-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9848.1.1 ID=mRNA_C-tenellus_contig9848.1.1|Name=mRNA_C-tenellus_contig9848.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2283bp|location=Sequence derived from alignment at C-tenellus_contig9848:150..2432- (Choristocarpus tenellus KU2346)
TTGCCCTGGACAAGTAGGTTGGTAAGAGCTCTAGGGTTTATTGAGCCTAG
AGTGACAGGGGCTCTAGCGTGCCTGACGATGGTAGCGCTCATCCGAAAAG
GTCACACTTTCTGTCCCACGCCAATGGTAAAACCCAGGGAAATGCTGGAT
CATAGCGGTCAAAGAACTGAGCGGCATGCGATGAATGTGGAAGTCGGGAC
AGAGGGCACTCCAATGCCTGTGGTTGTACACAGAGAGGTAACTCCTGAGA
AAATCAAGGTGAGTCTTATGTTCGTGGTTGAAGTACCATGTACTCTGGGG
CTACACGAAGTCAACCTACTTAAAGCACCTCCCGCATCTGCTTCAGCTGA
AGCTCGTGAAGATGGGTTCAAAACCTAGACTGTCCCATTCTGACTTGACC
AGTGGGAGAATTGCGTCATCTACCCTTCTTCCACTCCATCCCTGAATGAT
GTGGTTGAATTTACCACAGTAGAAAATTAATTGCGTCATTCTTGATCCAT
GCCCTTATAGCAAGAAGAGGTTTTTGCCTGGCAACAACTACCTTAGTATT
TTTGTTTCGAGGCGAGTACTTCCCAAATACGAGGGAAGCACGAAGTTGCC
AAAATCACGATGCCTGAAATATGATAAGAACCTTACTTGATCTACAAATA
TTGCGCAACGTTGTGTTCGGCAACGACCAGTACCCTCATAGATCCCGTCA
AGGTCAATGTATTTGTCTTGTTACCTGCTACGATCTTGGTGTACACAATG
TTCCTCCTTCCTGCAAAGCTGCGGGTTCCTGTATATCGATTGGCGAAAGT
TTGACTAGTGAAGACATGTTCTGCCTGGTAATCTTGCCTGTTCCAGAATG
TATATATGTATGTATGTATGGATAGATATTGTGAATAAGTTGTTAAGTAT
CTCTTCAGCTAATGCAAAGAGCCATTCTCCTTCACCTTTCGACTTTCAGA
CAGCATCATACCAATACCAGTATATACACCATTTCACAAATGGTAGTTTG
TAGCCATCAATGTTATATTTGACATTTGAGGGAACAAAATCCCTCCGCTA
GGGCTCTGATTTTATTGAAGATCGCAAACGCCTTTTGCTAACCCTTACCC
TAATCAACACTATCCACAAGACATCCCAAACATCTCATGATGTAAGGGGA
TGGACTTGTTTTCCTTCTTTTTTTTTCATGTTGCCACGTATGTCAAATAT
GGAGTATTGAACTGTATTCACCCACCACCCCGCATATCAGCAGAGACAGG
TGATACTCGTGGGTGACGTCCATGGGTGTCACGATGAAATGGTGGCCCTG
CTGGAGAGGTGTGGGTACCGTGTGGGGCGCAGGGAAGACCGTGAGCGCTT
CTCAGTCGTCCTAGTGGGGGACCTTGTGAACAAGGTGTGATTTCACACAC
ACTGATTTAGGGGGTGGGGGAGGAGGAGGAAGGGGTATGCACTCCTGGGC
GGCTGATTATAGTTGTATGTCCACCAATCGCATCCCACTGTTGAGAGGTA
TTGAAGGTGGCCGAGAGGTCTAAGGGAAAGGCAGGGGATGTGACATTTGG
GGCATGTTGAACATCTCCCAACTGGACCAACGTCTCTTTCCACTGTTTCA
ATTTTGCGCTCTGGAAAAACTCCACTTCTGTGTTCTTGCCAGCGACATGA
AGTCGGGCACTTTCAGACACAATATAAACAGACTGAATAGCAGTCGTATC
CATCCCGAGTCCTAAGAGATATACCACGCAGATATATATATATATATATA
TATTTTATTTTATTTTCTCTGAGGAGACGAAAGGCATTGCAAAACAAAAA
AAAATTAAGGAAAACGATGAAGCCATCTTTTGAAAGAGAAAGAACGGCAA
TAGTATTATGCGGCTATCTAGTCTTTCCACCACAGCGGTGTTTAACATCA
AATAAAGAAAAAAAATAGGAAGAGAAAAAAAAAAATGACACCAGTAGTGT
TCATCTCTTGCGGTATCATACCCTGGAGTCATAGTCGTAGCTTGAGGCTT
ATACCGCGCCCTAATCTGCTGAAAAATTTCAAAGCGAATAAAGACAGGAC
CCTCTTGCGGTGGTGTCTTGTCTCTCTCTCGTCTTTTTTCTTTCCCCACG
AAATGCCCCTGCCCTGCCGTTTTTTCCATGCAGCATTTTGCCGATAAACC
CCTTTTGTAATGAGCACAAAATGTTCCGCCAAATGACGTGAAGGGACCCA
AATCAGCAGAGGTGATACGCACTGCGAGGGAAGAGGGCTTCCTGGCTGTG
AGGGGCAATCACGATAATTTTGTGCTTTCGGCT
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Coding sequence (CDS) from alignment at C-tenellus_contig9848:150..2432-

>mRNA_C-tenellus_contig9848.1.1 ID=mRNA_C-tenellus_contig9848.1.1|Name=mRNA_C-tenellus_contig9848.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=186bp|location=Sequence derived from alignment at C-tenellus_contig9848:150..2432- (Choristocarpus tenellus KU2346)
ATGGTGGCCCTGCTGGAGAGGTGTGGGTACCGTGTGGGGCGCAGGGAAGA
CCGTGAGCGCTTCTCAGTCGTCCTAGTGGGGGACCTTGTGAACAAGGGAC
CCAAATCAGCAGAGGTGATACGCACTGCGAGGGAAGAGGGCTTCCTGGCT
GTGAGGGGCAATCACGATAATTTTGTGCTTTCGGCT
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