mRNA_C-tenellus_contig9824.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9824.1.1
Unique NamemRNA_C-tenellus_contig9824.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Match: D8LE71_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE71_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 1.640e-102
Identity = 197/433 (45.50%), Postives = 250/433 (57.74%), Query Frame = 1
Query:  571 GLRRQRNETESRSLVVTHFEGATLKGPPTKSPENEDRFVHAKINLPIGVIHQCRIMEDS---------VCAWVFAVFDGHAGPNCAHYLKENFVEYLMKC-------------------------------------KVMNPP-------------------PPSLMEEADFEQLSIETVLVRALRQTMASLTRVFERHANVAGEISGACAIAGMYCQGSLVLANVGDCQAVYHGHLKSSPGVSVTLASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPSRTVGDVDLKASAPKGCIASYPEVSIVDMASELKPGWPRPLVPPFLVVATDGIWNHVPPNTVVAEVKAGIKKIQAHKKRFDATGEEGS--------GCLSFTDSESGTDTDEESYT-EGKWAPQ-LGLANRVVALAQGGRDDATAVVLVFE 1644
            GL      +  R+L V+     + KG PTKS ENEDR+VH K+++ +  +    +  DS         V  W FA FDGHAGP CAH+LKENF+ +L K                                          PP                   PP  +        S+E VL R L  T+ASLTR FE  A   GEISGAC I+G+YC+G+LVLANVGDCQAVYHG +KS+PG +VT  +T+HD +NP+EV RF  AGG++S++GRFQGVLEPSRTVGDVD+KA  PKGCIAS+PE+  VD+AS++  G  +P VPPFLV+ATDGIW+    N VV EVK GI KIQAHK+RF      G         G  +FTD ES ++ +   +   G+WA Q + LA RVV+LA+G  DDATA+V+VFE
Sbjct:   73 GLVADGERSAQRTLGVSLLGACSSKGCPTKSVENEDRYVHGKVHVDMSKLQGLGVQADSDGHGSGKGKVPCWAFATFDGHAGPACAHFLKENFMAHLRKTVDTRYNAANAKTTHSTTTRQAQGNADAGAGKLKXXXXXASEPPRKDGSVGHGGGDGNDNADVPPRKLSP------SVEVVLARLLTDTLASLTREFEEEALEIGEISGACVISGLYCEGALVLANVGDCQAVYHGQVKSAPGDAVTAQTTVHDGTNPAEVNRFLMAGGYISASGRFQGVLEPSRTVGDVDVKADCPKGCIASFPELFKVDIASDVFQGDEKPSVPPFLVLATDGIWDETTANIVVDEVKDGIAKIQAHKRRFAIRTRSGGKHKRNLSFGSTTFTDGESDSEDEPSEFCGSGEWAEQGMDLAERVVSLARGRYDDATALVVVFE 499          
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Match: A0A836CMW2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW2_9STRA)

HSP 1 Score: 103 bits (256), Expect = 6.970e-21
Identity = 80/232 (34.48%), Postives = 115/232 (49.57%), Query Frame = 1
Query:  763 FAVFDGHAGPNCAHYLKENFVEYLMKCKVMNPPPPSLMEEADFEQLSIETVLVRALRQTMAS-LTRVFERHANVAGEISGACAIAGMYCQGSLVLANVGDCQAVYHGHLKSSPGVSVTL-ASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPSRTVGDVDLKASAPKGCIASYPEVSIVDMASELKPGW------PRPLVPPFLVVATDGIWNHVPPNTVVAEVKAGIK 1434
            FAVFDGH G  C+ +L +N  E L +C        S  +E       ++  LV+AL++     L   F+       + SGAC + G+YC+G + +ANVGDC AV +      PG    +  S  H +  P E  R E AGG V +   F GVLEPSR++GD+DLK    +G + + P +  V +    +P        P     PFL+ A+DG+W+ V    VV   K  +K
Sbjct:    9 FAVFDGHGGSRCSQWLADNLEEDL-RCA------DSWRQEGLTLPKRLKGALVQALKRAEYKYLDLAFKE-----SDHSGACVVVGLYCEGHVCVANVGDCLAVLY-----LPGADSHVDLSVAHRSRQPEEARRIEAAGGLVINNRAF-GVLEPSRSIGDLDLKRHC-RGAVTADPYIREVVIPPPQQPAEGAAKKKPALQEAPFLLFASDGLWDVVAAPVVVDLTKKSLK 221          
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Match: A0A7S3XLZ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLZ6_HETAK)

HSP 1 Score: 97.8 bits (242), Expect = 6.300e-19
Identity = 69/231 (29.87%), Postives = 112/231 (48.48%), Query Frame = 1
Query:  760 VFAVFDGHAGPNCAHYLKENFVE-----YLMKCKVMNPPPPSLMEEADFEQLSIETVLVRALRQTMASLTRVFERHANVAGEISGACAIAGMYCQGSLVLANVGDCQAVYHGHLKSSPGVSVTLASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPSRTVGDVDLKASAPKGCIASYPEVSIVDMASELKPGWPRPLVPPFLVVATDGIWNHVPPNTVVAEVKAGIKK 1437
            +F+V DGH GP CA +L+ N  +     +  KC                  L +  VL   + + + S+   F ++A    + SGAC +  +    ++  ANVGDC  V    L +S G  + L S +H  +   E+ R   AG  +   GR  G+L PSR+VGD+D++ + P G + + P V+++    EL+ G       PFL++A+DGIW+ +        VK  +K+
Sbjct:   20 IFSVIDGHGGPGCADFLQSNLTDRIKHHFATKCSQGET------------SLGLGAVLTACVSEAICSVDADFTKYAESVNDYSGACFVVALCYSNTICFANVGDCLGV----LYNSTG-KIKLPSQVHRCTIQKEIQRIAKAGAPLRD-GRLGGLLVPSRSVGDLDVRLAYP-GAVVAEPYVAVL----ELEVGQGSSHRRPFLLLASDGIWDSMQTTAAAKHVKRTLKE 227          
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Match: A0A6H5KBY9_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY9_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 2.730e-17
Identity = 74/240 (30.83%), Postives = 117/240 (48.75%), Query Frame = 1
Query:  760 VFAVFDGHAGPNCAHYLKENFVEYLMKCKVMNPPPPSLMEEADFEQLSIETVLVRALRQTMASLTRVFERHANVAGEISGACAIAGMYCQGSLVLANVGDCQAVYHGHLKSSPGVSVTLASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPSRTVGDVDLKASAPKGCIAS-YPEVSIVDMASELKPGWPRPLVPPFLVVATDGIWNHVPPNTVVAEVKAGIKKIQAHKKRFDATGE 1476
            +F VFDGH GP CA +L ++    L    V+     +  +   F           A   +   L +V    A+  G++SG+ AI   +  G LV+A VGD   +Y  H+    G    L    H  SN  EV R  + GG + +  R  G L P+RT+GD+D K +   G I S +PE+++  + +    G P     PFLV+A+DG+W+ +    V +  + G++ ++AH+K+  A  E
Sbjct:  197 MFGVFDGHGGPACAEFLTQSVSTVLAHSPVLYDEDLTPTQRRTF-----------ATADSFEELEKVHNTWADEIGDLSGSTAILSTFQDGVLVMAGVGDSAGLYVDHM----GKQHNLCPQ-HSTSNEKEVERVLSMGGTIVNN-RVAGCLMPTRTIGDLDCKRAL--GAIVSPHPEITLAAIYAPPDDGEPHD--EPFLVLASDGLWDVLSFAEVASITRKGLRNLRAHEKQERAKAE 415          
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Match: D8LEW5_ECTSI (GJ12915 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW5_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 3.100e-17
Identity = 72/234 (30.77%), Postives = 115/234 (49.15%), Query Frame = 1
Query:  760 VFAVFDGHAGPNCAHYLKENFVEYLMKCKVMNPPPPSLMEEADFEQLSIETVLVRALRQTMASLTRVFERHANVAGEISGACAIAGMYCQGSLVLANVGDCQAVYHGHLKSSPGVSVTLASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPSRTVGDVDLKASAPKGCIAS-YPEVSIVDMASELKPGWPRPLVPPFLVVATDGIWNHVPPNTVVAEVKAGIKKIQAHKKR 1458
            +F VFDGH GP CA +L ++    L    V+     +  +   F           A   +   L +V  + A+  G++SG+ AI   +  G LV+A VGD   +Y  H+    G    L    H  SN  EV R  + GG + +  R  G L P+RT+GD+D K +   G I S +PE+++  + +    G P     PFLV+A+DG+W+ +    V    + G++ ++AH+K+
Sbjct:   79 MFGVFDGHGGPACAEFLTQSVSTVLAHSPVLYDEDLTPTQRRTF-----------ATADSFEELEKVHNKWADEIGDLSGSTAILSTFQDGVLVMAGVGDSAGLYVDHM----GKQHNLCPQ-HSTSNEKEVERVLSMGGTIVNN-RVAGCLMPTRTIGDLDCKRAL--GAIVSPHPEITLAAIYAPPDDGEPHD--EPFLVLASDGLWDVLSFAEVAFITRKGLRNLRAHEKQ 291          
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Match: D7FQA0_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA0_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.290e-16
Identity = 87/279 (31.18%), Postives = 130/279 (46.59%), Query Frame = 1
Query:  664 PENEDRFVHAKINLPIGVIHQCRIMEDSVCAWVFAVFDGHAGPNCAHYLKENFVEYLMKCKVMNPPPPSLMEEADFEQLSIETVLVRALRQTMASLTRVFERHANVAGEISGACAIAGMYCQGSLVLANVGDCQAVYHGHLKSSPGVSVTLASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPSRTVGDVDLKASAPKGCIASYPEVSIVDMASELKPGWPRPLVPPFLVVATDGIWNHVPPNTVVAEVKAGIKKI----QAHKKRFDATGEEGSG 1488
            P NEDR +    +  + V+           A +F VFDGH G   + ++  N + +L+          +  E  D+     +  L  A+ + +AS+ + +   +  +G+ SG CA         L  ANVGDCQA+    L +  G  V+L S  H A +  E AR  + GG V   GR  GVLEPSR +GD D+K + P GC+ + P V +  +       + R   P  LVVA+DG+W+ +   +V   V   I+K     Q  K+   A  E GSG
Sbjct:   75 PTNEDRAL--VFDDMVSVLKLAPTGTRGPLACLFGVFDGHGGDGASKFVA-NHLHHLIGRS-------AFYESIDYPA---DEALASAVEEGVASVEQAYTDWSKRSGDTSGCCACVVAIRGSVLCAANVGDCQAI----LITDKGAIVSL-SRPHRAVDLDEKARIRSNGGKVVQ-GRVMGVLEPSRVIGDYDIKRTWP-GCVIAEPYVLVRSLP------YTRGQEPSILVVASDGVWDFMTQASVSKLVTEAIRKQKDPRQVSKELVAAAREAGSG 327          
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Match: A0A1V9ZR45_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZR45_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.670e-15
Identity = 66/213 (30.99%), Postives = 102/213 (47.89%), Query Frame = 1
Query:  760 VFAVFDGHAGPNCAHYLKENFVEYLMKCKVMNPPPPSLMEEADFEQLSIETVLVRALRQTMASLTRVFERHANVAGEISGACAIAGMYCQGSLV---LANVGDCQ-AVYHGHLKSSPGVSVTLASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPSRTVGDVDLKASAPKGCIASYPEVSIVDMASELKPGWPRPLVPPFLVVATDGIWN 1386
            VFAV DGH G   + Y+K N V  L              E+ +  + SI   +        A+L  +F + A+ A + SGAC +A +  +       + NVGDC+ +      +  P  ++   S  H AS+P+E  R   AGG V S GR  GVL PSR++GD+D+K    +G + + PE+S   + ++              V+ATDG+W+
Sbjct:   86 VFAVMDGHGGDLASEYVKNNLVRVLD-------------EQPELTKSSIAAAV--------ATLETIFNKLASTARDYSGACFVALIVVEDGSARRFVVNVGDCRISALEVSARGHPKRTIHALSNDHKASDPNEKRRILVAGGSVVS-GRVAGVLAPSRSIGDIDMKVPGMEGWVIAEPEISEGTLCADS-----------IYVLATDGVWD 265          
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Match: A0A067C0L6_SAPPC (PPM-type phosphatase domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C0L6_SAPPC)

HSP 1 Score: 84.3 bits (207), Expect = 5.470e-14
Identity = 68/213 (31.92%), Postives = 101/213 (47.42%), Query Frame = 1
Query:  760 VFAVFDGHAGPNCAHYLKENFVEYLMKCKVMNPPPPSLMEEADFEQLSIETVLVRALRQTMASLTRVFERHANVAGEISGACAIAGMYCQGSL---VLANVGDCQ-AVYHGHLKSSPGVSVTLASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPSRTVGDVDLKASAPKGCIASYPEVSIVDMASELKPGWPRPLVPPFLVVATDGIWN 1386
            +FAV DGH G   + Y+K + V  +              E+++  + S+ET +        A+L   F + A  A + SGAC +A +  Q       + N+GDC+ A      ++ P   V   ST H AS P E  R   AGG V   GR  GVL PSR++GD+D+KA   +G + + PE+S   +A                V+ATDG+W+
Sbjct:   95 LFAVMDGHGGALASEYVKTHLVSVID-------------EQSEITKASLETAV--------ATLEARFNQIAADASDYSGACFVALLVLQDGSHRRFVMNLGDCRIAALEVSPQAHPKRQVHALSTDHKASCPLEKRRILVAGGSVVG-GRVAGVLAPSRSIGDIDMKAKGMEGWVVAVPEISEGKIARNS-----------IYVLATDGVWD 274          
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Match: A0A6A5AN54_9STRA (PPM-type phosphatase domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AN54_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.570e-12
Identity = 70/212 (33.02%), Postives = 96/212 (45.28%), Query Frame = 1
Query:  760 VFAVFDGHAGPNCAHYLKENFVEYLMKCKVMNPPPPSLMEEADFEQLSIETVLVRALRQTMASLTRVFERHANVAGEISGACAIAGMYCQ-GSLV--LANVGDCQAVYHGHLKSSPGVSVTLASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPSRTVGDVDLKASAPKGCIASYPEVSIVDMASELKPGWPRPLVPPFLVVATDGIWN 1386
            VFAV DGH G   + Y+K + V+ L              EE D    S        LR   A+L R F   A  A + SGAC +A +  + GS    + N GDC+      LK        L ST H AS P E  R   AGG+V    R  GVL PSR++GD+D+K    +G + + PE++   +  +              V+ATDG+W+
Sbjct:   67 VFAVIDGHGGDLASEYVKTHLVDILD-------------EEPDLTTAS--------LRHATATLERRFGELATAANDFSGACFVALVVVEDGSRTRFVINCGDCRISALERLKKHRREYKAL-STDHKASCPLEKQRIARAGGYVVMD-RVAGVLAPSRSIGDLDMKVPGMEGWVVADPEINEDVLCRDS-----------LYVLATDGVWD 244          
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Match: A0A024TW28_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW28_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.730e-12
Identity = 65/212 (30.66%), Postives = 99/212 (46.70%), Query Frame = 1
Query:  760 VFAVFDGHAGPNCAHYLKENFVEYLMKCKVMNPPPPSLMEEADFEQLSIETVLVRALRQTMASLTRVFERHANVAGEISGACAIAGMYCQG---SLVLANVGDCQAVYHGHLKSSPGVSVTLASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPSRTVGDVDLKASAPKGCIASYPEVSIVDMASELKPGWPRPLVPPFLVVATDGIWN 1386
            VFAV DGH G   + Y+K + V+      +++  P          +L++ET     LR   A+L   F   A VA + SGAC +A +  +    +  + N GDC+       K   G      ST H AS P E  R   AGG V    R  GVL PSR++GD+D+K    +G + + P+++  ++  +              V+ATDG+W+
Sbjct:   99 VFAVIDGHGGDLASEYVKTHLVD------ILDEEP----------ELTVET-----LRHATATLETRFAEVATVANDFSGACFVALVVVEDGRRTRFVVNCGDCRVSALERRKK--GREYMELSTDHKASCPLEKQRIAKAGGHVIMD-RVAGVLAPSRSIGDLDMKMPGMEGWVIADPDINEAELCPDS-----------LYVLATDGVWD 275          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9824.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE71_ECTSI1.640e-10245.50PPM-type phosphatase domain-containing protein n=2... [more]
A0A836CMW2_9STRA6.970e-2134.48Phosphatase 2C-like domain-containing protein n=1 ... [more]
A0A7S3XLZ6_HETAK6.300e-1929.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KBY9_9PHAE2.730e-1730.83PPM-type phosphatase domain-containing protein n=1... [more]
D8LEW5_ECTSI3.100e-1730.77GJ12915 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FQA0_ECTSI1.290e-1631.18PPM-type phosphatase domain-containing protein n=2... [more]
A0A1V9ZR45_9STRA2.670e-1530.99PPM-type phosphatase domain-containing protein n=1... [more]
A0A067C0L6_SAPPC5.470e-1431.92PPM-type phosphatase domain-containing protein n=2... [more]
A0A6A5AN54_9STRA2.570e-1233.02PPM-type phosphatase domain-containing protein n=7... [more]
A0A024TW28_9STRA3.730e-1230.66PPM-type phosphatase domain-containing protein n=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9824contigC-tenellus_contig9824:954..5736 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LE71
PFAMsPP2C
Model size2061
Max annot lvl2759|Eukaryota
KEGG koko:K01090,ko:K14803
Hectar predicted targeting categoryother localisation
Exons9
Evalue1.7e-106
EggNOG OGsCOG0631@1|root,KOG0698@2759|Eukaryota
Ec32 ortholog descriptionProtein phosphatase 2C
Ec32 orthologEc-00_001150.1
EC3.1.3.16
Descriptionprotein serine/threonine phosphatase activity
Cds size1323
COG categoryT
BRITEko00000,ko01000,ko01009,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9824.1.1prot_C-tenellus_contig9824.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9824 1278..5322 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790203.2121122-UTR-C-tenellus_contig9824:953..12771680790203.2121122-UTR-C-tenellus_contig9824:953..1277Choristocarpus tenellus KU2346UTRC-tenellus_contig9824 954..1277 +
1680790203.3343053-UTR-C-tenellus_contig9824:5322..57361680790203.3343053-UTR-C-tenellus_contig9824:5322..5736Choristocarpus tenellus KU2346UTRC-tenellus_contig9824 5323..5736 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790203.2234817-CDS-C-tenellus_contig9824:1277..15051680790203.2234817-CDS-C-tenellus_contig9824:1277..1505Choristocarpus tenellus KU2346CDSC-tenellus_contig9824 1278..1505 +
1680790203.2363894-CDS-C-tenellus_contig9824:1853..19911680790203.2363894-CDS-C-tenellus_contig9824:1853..1991Choristocarpus tenellus KU2346CDSC-tenellus_contig9824 1854..1991 +
1680790203.2470055-CDS-C-tenellus_contig9824:2324..24591680790203.2470055-CDS-C-tenellus_contig9824:2324..2459Choristocarpus tenellus KU2346CDSC-tenellus_contig9824 2325..2459 +
1680790203.2603164-CDS-C-tenellus_contig9824:2722..28871680790203.2603164-CDS-C-tenellus_contig9824:2722..2887Choristocarpus tenellus KU2346CDSC-tenellus_contig9824 2723..2887 +
1680790203.2702856-CDS-C-tenellus_contig9824:3178..33101680790203.2702856-CDS-C-tenellus_contig9824:3178..3310Choristocarpus tenellus KU2346CDSC-tenellus_contig9824 3179..3310 +
1680790203.2803981-CDS-C-tenellus_contig9824:3709..38771680790203.2803981-CDS-C-tenellus_contig9824:3709..3877Choristocarpus tenellus KU2346CDSC-tenellus_contig9824 3710..3877 +
1680790203.2911463-CDS-C-tenellus_contig9824:4452..45781680790203.2911463-CDS-C-tenellus_contig9824:4452..4578Choristocarpus tenellus KU2346CDSC-tenellus_contig9824 4453..4578 +
1680790203.312482-CDS-C-tenellus_contig9824:4827..49771680790203.312482-CDS-C-tenellus_contig9824:4827..4977Choristocarpus tenellus KU2346CDSC-tenellus_contig9824 4828..4977 +
1680790203.3248758-CDS-C-tenellus_contig9824:5241..53221680790203.3248758-CDS-C-tenellus_contig9824:5241..5322Choristocarpus tenellus KU2346CDSC-tenellus_contig9824 5242..5322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9824.1.1

>prot_C-tenellus_contig9824.1.1 ID=prot_C-tenellus_contig9824.1.1|Name=mRNA_C-tenellus_contig9824.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=441bp
MTLEVQAIQPRGDSESPAQSPASDEFGIRSNDIDDSAMDKSSSTGRSGRG
VRRKWGRRGTTLIKSLGAKIGAGQEQVGSEGLGLRRQRNETESRSLVVTH
FEGATLKGPPTKSPENEDRFVHAKINLPIGVIHQCRIMEDSVCAWVFAVF
DGHAGPNCAHYLKENFVEYLMKCKVMNPPPPSLMEEADFEQLSIETVLVR
ALRQTMASLTRVFERHANVAGEISGACAIAGMYCQGSLVLANVGDCQAVY
HGHLKSSPGVSVTLASTIHDASNPSEVARFETAGGFVSSTGRFQGVLEPS
RTVGDVDLKASAPKGCIASYPEVSIVDMASELKPGWPRPLVPPFLVVATD
GIWNHVPPNTVVAEVKAGIKKIQAHKKRFDATGEEGSGCLSFTDSESGTD
TDEESYTEGKWAPQLGLANRVVALAQGGRDDATAVVLVFE*
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mRNA from alignment at C-tenellus_contig9824:954..5736+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9824.1.1 ID=mRNA_C-tenellus_contig9824.1.1|Name=mRNA_C-tenellus_contig9824.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4783bp|location=Sequence derived from alignment at C-tenellus_contig9824:954..5736+ (Choristocarpus tenellus KU2346)
ATTTTTTGTGGGTTGACCTCCGATTCCAACAAATGATATAGTTACGTATT CTTAACACTATGGAAGACAGTACTTCACCTTGGTGTACGGTCAAGAAAGA GAAATATCAGAATTTGTGTGTCGAGATATTGAAAAGGAGAGGGCTTAAGC GAGACGGGACGCAAAGACAACAAGCTGGCTTTAGTGTGAGACGCGGTGGG ATTTGGAGTTGTTACCGAGGGTCAAACTCTGTAGACCTCCTGGTCAACTA TTTAGACGGACGATAAAACTGACGAAGTCGGATTGTGACTCAAAGTAAGT GGAGTCTAGTGCGATACGACCAGCATGACTTTAGAAGTCCAAGCTATACA ACCGAGAGGAGATTCTGAGAGTCCGGCACAGAGTCCCGCCTCGGATGAAT TTGGTATTCGAAGCAATGACATCGATGATTCTGCTATGGATAAGTCTTCT TCCACAGGACGATCAGGTCGCGGTGTGAGGAGAAAATGGGGCCGAAGGGG GACCACGTTGATAAAGAGTTTGGGCGCAAAAATCGGAGCTGGTCAAGAGC AGGTGAGAGATCATTTTTGTGCTTGAGTCTCCCAATCCAAATAGTACACT TAGGCACATGCTAGTTCTACTCAATGTGCCTTGGTACACGCTGTGGTTTT GTATCGTTGAAGAGTATGTCAACGTCCGTTATCACATATTTTGTTCAAAG AAACTCGGAAAGTCTGAAAGGCCCGTGCTCTCACCGCACTCAAGGATGGA CCGATTAATTGTATATCCCTCACCCTCCTTAACTCACCGACTCGTCCTGG TAGTTGTGGATGACTTGTGCCCCCCTCACACTGACTAAAACGACTTAGTC CCTGCGGAATCGATCAAGTCCTAACTTTTCTGGCAACAACATATCCTCAG GTGGGAAGCGAGGGACTCGGGCTCCGAAGGCAAAGAAATGAAACAGAGTC ACGCTCTCTAGTGGTAACTCATTTCGAGGGAGCAACGCTGAAAGGTCCTC CCACCAAGTCTCCAGAGAATGAAGACCGGTTTGTCCACGTGAGTACATGC ACCTTCCCTGACGAAGCCTATAATCTACTCAACTTAGCCCTCTGTAGAAT GCATATGCGGAATATACGGACGTTTCATCATCGTTCTTCACGAAATGCGA GGGAGTTCTAGAGAGAGTATGTGTCCATGTAAAAATATTTCGCGACATGA GCTTCTAGTCTTCCAAGTCTCCAAAGGTGGTAAGGGTTAGCATCACAAGA GTTAAGGTTTTTCCCTCCGATGCCGTGCATTCTACTTCTGTTAAGGTTTG GTAGAGGCTGAAATAGGCAAACGTCTGACCCATCATTAACATATCTCCAA CCTTATCCACGTTGTTGCCAGGCTAAGATCAATTTGCCGATTGGAGTTAT TCATCAATGTCGAATAATGGAAGATTCAGTGTGTGCTTGGGTGTTTGCTG TCTTCGACGGACACGCTGGACCGAACTGTGCACATTACCTGAAGGAAAAC TTTGTGGTGAGTGACTGCTCTCCTCCCCCTGCTTCTGTAGTTTCTCAACT TTGACTTTTCTTTGAAACCGGTCACTCTCCACCCACGCCTATTTTTCTGG CGTGTGCCCTGCGTCGGCATCAAGTTCAGAAATCAGGAGACAAGAGGAAC ATGTAGGCCTACCGTGTGTTAGTGTTTTTCTGATCTTTGACTGCCTTCTA TGGCCTCAGCCCCTTCCTTGGATGTGATGATATGGACCTGCTGTCTGCAC CTGTCCTTCTCTATCACAGGAATATCTGATGAAGTGCAAGGTGATGAACC CTCCACCGCCCAGTCTGATGGAAGAAGCAGATTTCGAGCAGTTATCGATC GAGACAGTGCTTGTTCGTGCTCTTCGACAAACAATGGCTTCGCTCACAAG AGTGTTTGAGCGGCATGCTAACGTTGCGGGGGAGGTGAGGTGCTGCTTAA CAAGCTTTTCATACCGCGTTTTTTTTTTTTGTTTAGAGAGTACATGCATC GGTAAACTGACTCTGTAAAAAAAAGGGAAAGCTATCAGAGACCAAAGTTT TGTTTTTGTTTCTATGTTTTTTTGTGTGAATTACGTAGATAATTATATTG ATTTTTTTTGCCCTTGGTTCTGGTTTTGAAATTCGTGTGGTACGTTGAAG GGGAAGATCACGAGGTAGTGCAGATGAACTAGAAACCTGCTCACTCTTCA TCCCTTTCCATTCTACACACGGCAGATCTCTGGTGCATGTGCTATCGCGG GAATGTATTGCCAGGGTTCCTTAGTCCTAGCCAATGTGGGGGATTGTCAG GCTGTGTACCATGGGCACTTGAAGAGTTCCCCAGGGGTTTCAGTCACGCT GGCATCGGTGAGCAACGAAACTTAGTATGGTAGTTCAGAATGACTTGAGC TCGTCTGTAACATATATATATATATATATATTTCTTTTGCTCGAATGGGT TTGTTAGTGGCCAGCAGTGCGTGTGTGCTTGTACCTTGCTTACTCTTAAG ACCTTTCTGCTGCGGTATGCGTTGAGTGCAGCATGCTTCGTAGTATTTGT AGGGATTGTGTATCAAGCTATGTGGCTATTACGGATTGGTTGCTCTTCTG ATTAACCATGTAACTCTTTCGAGCTCTTCTGAAATGTTCCAGTATCTTCT GAAGTGTCAAGTCTTGGTACTGTACAGAATGTTTAAAACTACAGGAGTAA TCCCAATGTGTGCACTCCTTGGAAATGTCACTCAACCTTCTCTTGCTGCA CGATAGACGATCCATGATGCGTCAAACCCATCAGAGGTGGCCCGATTTGA GACAGCAGGAGGCTTCGTGAGCTCCACAGGACGTTTCCAGGGTGTGCTGG AGCCCAGTCGGACTGTGGGGGACGTGGACCTAAAGGCATCAGCACCAAAG GGTTGCATTGCATCCTACCCTGAGGTGTGATATTTCTTTGGCAGTGTTAC TACCGAAAGCATTCCCGAAGTAACCTCTAGAATGTGTGTGTGCGTTTGCG TCTGTTGTATCCCCGAAGGTAGAGCTTATTTTTTCCTTTTTGTTGGAGAT GTGGGGAATGCGAATGTTTTGCCCCCACATTAGTTGCCCAGGCTGAGAAA GTTTCACCAGATCTCATGTGTGATAATGTGGACGATGATTTGTGATTCAC TTGAAAGGTATTTAGTTTGCTCGACTTCAAGAGTGTAAAGTCTCTGATGA AGGCCTTCATCTTAAGAGATTGTTTAGTCGTGGGCATTTTTTTTTTTCTA CTTCCAGTGAAAATGAAAACAAATGTGCAGTAATAGGTTTTTGGTATCAA GCGCTATATTTGACGGGTTTTATTTATTTGATTTTTTCTTGCTGCTGCTG TTGCACGCTGACATTCCTGTCGAGGTGCAATACTTGGAGTTTAGTTTGTT ATTTTCTCAATTTTGTACTGCTCTTGCCTCCTAAATACCATGCTGTGCTT CTGTCTCGCCTTCTTCCAATCCCCAAACCCTACTGCTGTTCTTGGAAAGG TGTCAATTGTGGATATGGCCAGTGAATTAAAACCAGGTTGGCCTAGACCG TTGGTGCCACCTTTTCTTGTGGTTGCAACGGATGGTATCTGGAATCATGT TCCCCCCAATACTGTTGTGGCAGAGGTGAGTCGTCGATTGTTGAAGCCAT CTTTTTTTTAATGGATGTGGAAAGTTACCCCTTCCTGCTTTGAGCCTCCC CTTGATATTCGACATGAACTTGCCTTTGCATTTGTTGAGGAGACGTTGAG CTTTAGTTTGTACCTTGGTTCTTGTGGTCTATCAAGAACAGAATCAAGAA AATGCTTGTATTATCACCCATTGCTGCCCTATCTGGTTCTTGTCCAATTA CCTGCTTGCTCGTTCGTTTCTCAGGTGAAGGCAGGTATTAAGAAGATCCA GGCACACAAGAAGAGGTTCGATGCCACTGGTGAGGAGGGCTCAGGTTGTC TGTCATTTACAGACTCAGAGAGTGGAACAGACACAGATGAGGAAAGCTAC ACGGAGGGGAAGTGGGCACCTCAAGTGAGAGACTCGTTGAAACTTTATTG GTAGACTCCTGGGATTGAGTGCCGTTGGTTGATTGCAATGATAGTGTGGG TTTATGTCGTGGTAAAAAGTGATGTTAACGAAGAGGTATCTTTTAACGTT TTGGTCAGTTTGATCTTATGTGAGGAGGAGCCTGATCTGATGCCGCGTGA CTGACGTATGCCCATATTTTGTCTGTCCCCTCTGTTGCCTCTCCGTCCAC TGCATCGGTCACCTCCTTTCCAACTTTCTGTGCTGCAGTTGGGACTAGCT AACAGGGTGGTGGCGCTTGCACAGGGGGGGAGGGATGATGCCACTGCTGT TGTGTTGGTCTTTGAATAATGCATTTGAAGGAAGGGGTTGAGAGGTGATC GTGAGGTGGGGTTTTGCTGGGTTACTTGGCGGGAAAGGACTTGATCTATG TTGGGATATTGTTTGGTGTAGCTGCACCTTATTCATGATGGCCCTCGTTA CCTCTTTCCTTGCAACTTGCTCTGGACCTCTTTGTAGTGACTTGATGCCC TTGTTTCTGCATATAGAAGAGAGTGGGAGAGGGGCGCTTGTTACCTGAAG GGATAGCGGTTTATTTATCGATTTTCAAGTGCAATATGGTGTGTGTGAGA GAGAGAGAAAAGTCCAAACTGTGCTGGGAAGGTTTTCATTCTTAAGTGTT GTGAATGTTTTGTGTGGGTGTAGGTTGTGATGGTGGGTGGAGTGTTTTCC CCCATGTCATCGCCCCCCCCCCCCCCCCCCCCC
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Coding sequence (CDS) from alignment at C-tenellus_contig9824:954..5736+

>mRNA_C-tenellus_contig9824.1.1 ID=mRNA_C-tenellus_contig9824.1.1|Name=mRNA_C-tenellus_contig9824.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1323bp|location=Sequence derived from alignment at C-tenellus_contig9824:954..5736+ (Choristocarpus tenellus KU2346)
ATGACTTTAGAAGTCCAAGCTATACAACCGAGAGGAGATTCTGAGAGTCC
GGCACAGAGTCCCGCCTCGGATGAATTTGGTATTCGAAGCAATGACATCG
ATGATTCTGCTATGGATAAGTCTTCTTCCACAGGACGATCAGGTCGCGGT
GTGAGGAGAAAATGGGGCCGAAGGGGGACCACGTTGATAAAGAGTTTGGG
CGCAAAAATCGGAGCTGGTCAAGAGCAGGTGGGAAGCGAGGGACTCGGGC
TCCGAAGGCAAAGAAATGAAACAGAGTCACGCTCTCTAGTGGTAACTCAT
TTCGAGGGAGCAACGCTGAAAGGTCCTCCCACCAAGTCTCCAGAGAATGA
AGACCGGTTTGTCCACGCTAAGATCAATTTGCCGATTGGAGTTATTCATC
AATGTCGAATAATGGAAGATTCAGTGTGTGCTTGGGTGTTTGCTGTCTTC
GACGGACACGCTGGACCGAACTGTGCACATTACCTGAAGGAAAACTTTGT
GGAATATCTGATGAAGTGCAAGGTGATGAACCCTCCACCGCCCAGTCTGA
TGGAAGAAGCAGATTTCGAGCAGTTATCGATCGAGACAGTGCTTGTTCGT
GCTCTTCGACAAACAATGGCTTCGCTCACAAGAGTGTTTGAGCGGCATGC
TAACGTTGCGGGGGAGATCTCTGGTGCATGTGCTATCGCGGGAATGTATT
GCCAGGGTTCCTTAGTCCTAGCCAATGTGGGGGATTGTCAGGCTGTGTAC
CATGGGCACTTGAAGAGTTCCCCAGGGGTTTCAGTCACGCTGGCATCGAC
GATCCATGATGCGTCAAACCCATCAGAGGTGGCCCGATTTGAGACAGCAG
GAGGCTTCGTGAGCTCCACAGGACGTTTCCAGGGTGTGCTGGAGCCCAGT
CGGACTGTGGGGGACGTGGACCTAAAGGCATCAGCACCAAAGGGTTGCAT
TGCATCCTACCCTGAGGTGTCAATTGTGGATATGGCCAGTGAATTAAAAC
CAGGTTGGCCTAGACCGTTGGTGCCACCTTTTCTTGTGGTTGCAACGGAT
GGTATCTGGAATCATGTTCCCCCCAATACTGTTGTGGCAGAGGTGAAGGC
AGGTATTAAGAAGATCCAGGCACACAAGAAGAGGTTCGATGCCACTGGTG
AGGAGGGCTCAGGTTGTCTGTCATTTACAGACTCAGAGAGTGGAACAGAC
ACAGATGAGGAAAGCTACACGGAGGGGAAGTGGGCACCTCAATTGGGACT
AGCTAACAGGGTGGTGGCGCTTGCACAGGGGGGGAGGGATGATGCCACTG
CTGTTGTGTTGGTCTTTGAATAA
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