mRNA_C-tenellus_contig9778.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Match: D7FKD9_ECTSI (MutS protein homolog 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD9_ECTSI) HSP 1 Score: 298 bits (764), Expect = 9.330e-94 Identity = 158/286 (55.24%), Postives = 208/286 (72.73%), Query Frame = 1 Query: 1 QDGVEVVMQAENNEISRQLRSLLSKSNDMTRTLLRIKKVSANHVDWCRLLQALESTLAIQDVLHILQRRVEAPA-------HASFLQHLVERVDGPSLRHCLDDVSTVIDQAATVEEKDMVIRTGYCPKLDQLKQTLADLGELLRTVGQVVLSDNPLLEELSVEYVPQIGFLTALTSASEDLVPQDFTFAFAQGDVVYYKNTHMLELDDEIGDIQAQIADLQASLIRHLEETVLEREGALHHAAAAMGELDATLALASVATDFGFVRPQVVEQNVIVIKNGRHPLQ 837 QDGVEV+MQAEN EI R+LRS LSKS MTR ++RIKKV+ DWC+L+ ++ES L ++D L +++ A + SFL L++ +D LR CL+ + TVID A+ ++KD+VIR G+ +LD +++ L DL ++L+ +GQ+VL++N +LEELSVEYVPQIGF T L DL P DFTFAFAQG+ VYYK+ M ++DD IGDIQA I D QA ++R LE+ ++ EGALH AA+ + ELDA LALASVA DFGFVRP+VVE NVI+IKNGRHPLQ Sbjct: 129 QDGVEVLMQAENAEICRRLRSQLSKSYGMTRIIMRIKKVAWTFADWCKLITSIESALDVRDGLALMRTSAGAAVTVGGRFGNESFLARLLDDIDPVVLRKCLEGLCTVIDPVASAQDKDVVIRPGFDEELDNMRERLEDLPDILQQIGQIVLNENSVLEELSVEYVPQIGFFTTLHERFGDLAPDDFTFAFAQGETVYYKSPTMRDVDDRIGDIQALITDKQAKIMRELEDALIAEEGALHAAASVLAELDAALALASVAGDFGFVRPEVVEDNVIMIKNGRHPLQ 414
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Match: A0A4D9D1J2_9STRA (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1J2_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.210e-37 Identity = 101/304 (33.22%), Postives = 154/304 (50.66%), Query Frame = 1 Query: 10 VEVVMQAENNEISRQLRSLLSKSNDMTRTLLRIKKVSANHVDWCRLLQALESTLAIQDVLHIL----------------------QRRVEAPAHASF--LQHLVERVDGPSLRHCLDDVSTVIDQAATVEEKDMVIRTGYCPKLDQLKQTLADLGELLRTVGQVVLSD--NPLLEELSVEYVPQIGFLTALTSASEDLVPQD--FTFAFAQGDVVYYKNTHMLELDDEIGDIQAQIADLQASLIRHLEETVLEREGALHHAAAAMGELDATLALASVATDFGFVRPQVVEQNVIVIKNGRHPLQ 837 VE+++ E E+ LL K D+ R L R+++ + DW L E L +Q L +L R E P ++ LQ ++R+ ++ + ++ V+D T E K + +R G +LD+L+ L E L + VL++ + LL ++SV+++PQ+GFL + + V D F F FA+GD +YYK M LDD IGD+ A I DL+ L+R L E +L+ E AL A A ELD +A A +A +VRP V E+ V+V+K+GRHPLQ Sbjct: 2 VELLLHPEAMEVVTNAGMLLGKVGDVQRILTRMRRAGSTVNDWLTLANTAEHVLLLQSCLAVLVHLTARLSSASDKGPTTAGEEEHRTNEGPYSSAMAMLQGFLDRISRQAVGRVSEALTKVLDLEVTRESKTVAVRMGCDEELDRLRGDYDGLEEFLSEEARGVLAEQSSQLLSKISVQFLPQVGFLVIVQANERIAVENDPRFRFLFAEGDALYYKTPRMDVLDDSIGDLSAAIQDLEGLLLRQLAEEILKEEIALTEAVRACAELDVLMAFAQLAGGLAWVRPMVTEERVVVVKDGRHPLQ 305
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Match: W7TMA2_9STRA (Mismatch repair protein 5 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMA2_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.240e-37 Identity = 101/307 (32.90%), Postives = 156/307 (50.81%), Query Frame = 1 Query: 1 QDGVEVVMQAENNEISRQLRSLLSKSNDMTRTLLRIKKVSANHVDWCRLLQALESTLAIQDVLHIL---------------------QRRVEAPAHAS---FLQHLVERVDGPSLRHCLDDVSTVIDQAATVEEKDMVIRTGYCPKLDQLKQTLADLGELLRTVGQVVLSD--NPLLEELSVEYVPQIGFLTALTSASEDLVPQD--FTFAFAQGDVVYYKNTHMLELDDEIGDIQAQIADLQASLIRHLEETVLEREGALHHAAAAMGELDATLALASVATDFGFVRPQVVEQNVIVIKNGRHPLQ 837 Q+ VE+++ E E+ LL K D+ R L R+++ + DW L E L +Q L +L + R +++S LQ ++R+ ++ + ++ V+D T E K M +R G +LD+L+ L E L + VL++ + LL ++SV+++PQ+GFL + + V D F F FA+GD +YYK M LDD IGD+ A I D + L+R L E +L+ E AL A A ELD +A A +A +VRP V E+ V+V+K+GRHPLQ Sbjct: 296 QNMVELLLHPEAMEVVTNAGMLLGKVGDIQRILTRMRRAGSTVNDWLTLANTAEHILLLQSCLAVLAHLTARLSSASDKGPTTAGEEEHRTNEGSYSSAMAMLQGFLDRISRQAVGRVSEALTKVLDLEITRESKSMAVRLGCDEELDRLRGDYDGLEEFLSEEARGVLAEQSSQLLSKISVQFLPQVGFLVIVQANERIAVENDPRFRFVFAEGDALYYKTPRMDVLDDSIGDLSAAIQDREGLLLRQLAEEILKEETALAEAVRACAELDVLMAFAQLAGGLAWVRPMVTEERVVVVKDGRHPLQ 602
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Match: W2LZG1_PHYPR (DNA_MISMATCH_REPAIR_2 domain-containing protein n=10 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LZG1_PHYPR) HSP 1 Score: 133 bits (334), Expect = 1.630e-31 Identity = 91/270 (33.70%), Postives = 137/270 (50.74%), Query Frame = 1 Query: 31 ENNEISRQLRSLLSKSNDMTRTLLRIKKVSANHVDWCRLLQALESTLAIQDVLHILQRRVEAPAHASFLQHLVERVDGPSLRHCLDDVSTVIDQAATVEEKDMVIRTGYCPKLDQLKQTLADLGELLRTVGQVVLSDNPLLEELSVEYVPQIGFLTALTSASEDLVPQDFTFAFAQGDVV-YYKNTHMLELDDEIGDIQAQIADLQASLIRHLEETVLEREGALHHAAAAMGELDATLALASVATDFGFVRPQVVEQNVIVIKNGRHPLQ 837 EN+E+ RQL LL D+ RIK+ A+ DWCR + ++ S L Q ++ +P + F + ER + H + + V+D + +E +VIR+G LD +Q DL +L V V NP+L ++V+Y+PQ+G++ S + +P DF F F + D YYK+ +LD+ IGDI I DLQ L+ L +LE EG++H M LD ++ AS A F F RP + E + + RHPLQ Sbjct: 282 ENDEL-RQL--LLKHFRDVAGIFQRIKRRCASVGDWCRFITSIGSFLEAQSLIEDASETSISPLPSVFSRVKSER----GVTHVSNLLGNVVDFEESQQESTVVIRSGISDTLDAARQRYEDLDNVLTEVAFQVQEANPVLSSITVQYIPQVGYVICCESPTT--LP-DFVFQFQEDDTTFYYKDACCRDLDESIGDIYGYILDLQRELLEELTMALLEYEGSIHEMTWIMSNLDCLISFASCAKSFNFTRPLISEGSTLKATQARHPLQ 541
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Match: W2LZF6_PHYPR (DNA_MISMATCH_REPAIR_2 domain-containing protein n=24 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LZF6_PHYPR) HSP 1 Score: 133 bits (334), Expect = 2.180e-31 Identity = 91/270 (33.70%), Postives = 137/270 (50.74%), Query Frame = 1 Query: 31 ENNEISRQLRSLLSKSNDMTRTLLRIKKVSANHVDWCRLLQALESTLAIQDVLHILQRRVEAPAHASFLQHLVERVDGPSLRHCLDDVSTVIDQAATVEEKDMVIRTGYCPKLDQLKQTLADLGELLRTVGQVVLSDNPLLEELSVEYVPQIGFLTALTSASEDLVPQDFTFAFAQGDVV-YYKNTHMLELDDEIGDIQAQIADLQASLIRHLEETVLEREGALHHAAAAMGELDATLALASVATDFGFVRPQVVEQNVIVIKNGRHPLQ 837 EN+E+ RQL LL D+ RIK+ A+ DWCR + ++ S L Q ++ +P + F + ER + H + + V+D + +E +VIR+G LD +Q DL +L V V NP+L ++V+Y+PQ+G++ S + +P DF F F + D YYK+ +LD+ IGDI I DLQ L+ L +LE EG++H M LD ++ AS A F F RP + E + + RHPLQ Sbjct: 301 ENDEL-RQL--LLKHFRDVAGIFQRIKRRCASVGDWCRFITSIGSFLEAQSLIEDASETSISPLPSVFSRVKSER----GVTHVSNLLGNVVDFEESQQESTVVIRSGISDTLDAARQRYEDLDNVLTEVAFQVQEANPVLSSITVQYIPQVGYVICCESPTT--LP-DFVFQFQEDDTTFYYKDACCRDLDESIGDIYGYILDLQRELLEELTMALLEYEGSIHEMTWIMSNLDCLISFASCAKSFNFTRPLISEGSTLKATQARHPLQ 560
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Match: A0A225W605_9STRA (MUTSd domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W605_9STRA) HSP 1 Score: 128 bits (321), Expect = 6.100e-31 Identity = 89/280 (31.79%), Postives = 136/280 (48.57%), Query Frame = 1 Query: 1 QDGVEVVMQAENNEISRQLRSLLSKSNDMTRTLLRIKKVSANHVDWCRLLQALESTLAIQDVLHILQRRVEAPAHASFLQHLVERVDGPSLRHCLDDVSTVIDQAATVEEKDMVIRTGYCPKLDQLKQTLADLGELLRTVGQVVLSDNPLLEELSVEYVPQIGFLTALTSASEDLVPQDFTFAFAQGDVV-YYKNTHMLELDDEIGDIQAQIADLQASLIRHLEETVLEREGALHHAAAAMGELDATLALASVATDFGFVRPQVVEQNVIVIKNGRHPLQ 837 Q GV EN+E+ L L + D+ RIKK A+ DWCR + ++ S L Q ++ + + F + + ER + + + + V+D + +E +VIR+G LD ++ DL +L V V NP L ++V+Y+PQ+GF+ + + +P DF F F + D YYK+ +LD+ IGDI I D+Q L L +LE E ++H M LD ++ AS A F F RPQV E + + RHPLQ Sbjct: 76 QSGVAYFADTENDELRHLLFGKLKRFRDVAGIFQRIKKRCASVGDWCRFVTSIGSFLEAQSLIEGTFDQNNDSLPSIFSRAISER----GIINVGNLLGNVMDFDESQQENMVVIRSGISETLDAARERYEDLDNILTEVAFQVQETNPALSSITVQYIPQVGFV--ICCEAHTTLP-DFVFQFQEDDATFYYKDGSCRDLDESIGDIYGYIVDIQRELQEELTMALLEYESSIHEMTWIMSYLDCLISFASCAKSFNFTRPQVTEDDSLKATQARHPLQ 348
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Match: A0A139AXG1_GONPJ (DNA_MISMATCH_REPAIR_2 domain-containing protein (Fragment) n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AXG1_GONPJ) HSP 1 Score: 131 bits (330), Expect = 6.220e-31 Identity = 93/283 (32.86%), Postives = 147/283 (51.94%), Query Frame = 1 Query: 4 DGVEVVMQAEN-NEISRQLRSLLSKSNDMTRTLLRIKKVSANHVDWCRLLQALESTLAIQD---VLHILQRRVEAPAHASFLQHLVERVDGPSLRHCLDDVSTVIDQAATVEEKDMVIRTGYCPKLDQLKQTLADLGELLRTVGQVVLSDNPLLEELSVEYVPQIGFLTALT-SASEDLVPQDFTFAFAQGDVVYYKNTHMLELDDEIGDIQAQIADLQASLIRHLEETVLEREGALHHAAAAMGELDATLALASVATDFGFVRPQVVEQNVIVIKNGRHPLQ 837 D VE++ + EN + L+++ S N R L+ + + DW RLL + +Q LH+ P L + +D +L+ ++T++D + + I+ G +LD+LK+T LG+LL ++G V ++ P L +++V Y PQ+G+L A +A E L + TF F +VYYKN M +LD E+GD+ A IAD + I+ L + +E ++ A +GELD LALA A + + RP + E NVI I NGRHP+Q Sbjct: 248 DAVEILTKIENAGSVEFLLKAINSVGN--MRNLVSQVRTGLSLQDWGRLLSFTFNAAEVQTRCRELHLTPFIKRVP----ILDRIAREIDVETLKGIGGSINTIVDFDDSGRNGKVQIKHGVDEELDELKRTYEGLGDLLTSIGNDVQAELP-LGDITVVYFPQLGYLIASPKTAGESLDVEGLTFQFETDAIVYYKNDRMRQLDQELGDLHAMIADREIEWIQQLTDRAIEGADSILGAYDVIGELDCLLALADAARKYRYKRPMLTEDNVIKIVNGRHPIQ 523
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Match: A0A329SGH8_9STRA (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SGH8_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.370e-30 Identity = 87/271 (32.10%), Postives = 136/271 (50.18%), Query Frame = 1 Query: 28 AENNEISRQLRSLLSKSNDMTRTLLRIKKVSANHVDWCRLLQALESTLAIQDVLHILQRRVEAPAHASFLQHLVERVDGPSLRHCLDDVSTVIDQAATVEEKDMVIRTGYCPKLDQLKQTLADLGELLRTVGQVVLSDNPLLEELSVEYVPQIGFLTALTSASEDLVPQDFTFAFAQGDVV-YYKNTHMLELDDEIGDIQAQIADLQASLIRHLEETVLEREGALHHAAAAMGELDATLALASVATDFGFVRPQVVEQNVIVIKNGRHPLQ 837 AEN+E+ + L L + D+ RIK+ A+ DWCR + ++ S L Q ++ + +P F + ER + + + V+D + +E +VIR+G LD ++ DL +L V V NP+L ++V+Y+PQ+G++ S + +P DF F F + D YYK+ +LD+ IGDI I D+Q L+ L +LE E ++H M LD ++ AS A F F RPQ+ E N + RHPLQ Sbjct: 297 AENDELRQHLLGKLKRFRDVGGIFGRIKRRCASVNDWCRFVTSIGSFLEAQSLIESVCETSNSPLPNVFSRVKNER----GVIQVSNLLGNVVDFEESQQESTVVIRSGVSETLDAARERYEDLDNVLTEVAFQVQEANPVLSSITVQYIPQVGYVICCESPTT--LP-DFVFQFQEDDTTFYYKDACCRDLDESIGDIYGYILDIQRELLEELTMALLEYESSIHEMTWIMSYLDCLISFASCAKSFNFTRPQISEGNTLKAIQARHPLQ 560
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Match: A0A177SX17_9BASI (MutS_IV domain-containing protein (Fragment) n=2 Tax=Tilletia TaxID=13289 RepID=A0A177SX17_9BASI) HSP 1 Score: 116 bits (291), Expect = 3.170e-28 Identity = 71/198 (35.86%), Postives = 107/198 (54.04%), Query Frame = 1 Query: 259 DGPSLRHCLDDVSTVIDQAATVEEKDMVIRTGYCPKLDQLKQTLADLGELLRTVGQVVLSD-NPLLEELSVEYVPQIGFLTAL--TSASEDLVP--QDFTFAFAQGDVVYYKNTHMLELDDEIGDIQAQIADLQASLIRHLEETVLEREGALHHAAAAMGELDATLALASVATDFGFVRPQVVEQNVIVIKNGRHPLQ 837 D L C +++ +ID + E + I+TGY +LDQ KQ A L +LL + Q + D +P +E++V Y PQ+G+L A+ T D +P + F FA + +Y+K M +LD +GDI I + + + L+E + + L A ELD LALA AT FG+V P++ ++NVI I GRH LQ Sbjct: 3 DKKVLNFCSQNIAGIIDFDESASESRICIKTGYDEELDQWKQLYAGLPDLLNRIAQDIRPDVDPKFKEITVCYFPQLGYLLAIPVTEDMSDQLPTLDGWDFQFASENAMYFKGDKMRDLDTHLGDIHTFIVEREIEHLFALQEAICQHASVLLQIADLFAELDCLLALAEAATRFGWVCPEMTQENVIEIYQGRHALQ 200
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Match: A0A397IPB7_9GLOM (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397IPB7_9GLOM) HSP 1 Score: 119 bits (297), Expect = 1.470e-26 Identity = 88/283 (31.10%), Postives = 143/283 (50.53%), Query Frame = 1 Query: 10 VEVVMQAENNEISRQLRSLLSKSNDMTRTLLRIKKVSANHVDWCRLLQALESTLAIQDVLHILQRRVEAPAHASFLQHLVERVDGPSLRHCLDDVSTVIDQAATVEEKDMVIRTGYCPKLDQLKQTLADLGELLRTVGQVVLSDNP--LLEELSVEYVPQIGFLTALTSASEDLVPQDFT-----FAFAQGDVVYYKNTHMLELDDEIGDIQAQIADLQASLIRHLEETVLEREGALHHAAAAMGELDATLALASVATDFGFVRPQVVEQNVIVIKNGRHPLQ 837 +E ++ +N EIS QL S L ++ + + ++K N DW + L + D HI RRV+ + L + E L+ +++ VID +V+E +VI+ +LD +K+T L + L V + + + P L+V Y PQ+G+L + E QDF + F+ +VYYKN M ELD+ +GDI I D + ++ L++ LE L +A+ ELD L+LA A +G+ RP + E+N+++I+ GRHPLQ Sbjct: 95 IECFLKTDNLEISNQLASCLKHIKNIPKIIEKMKG-KLNVKDW-------QYALQVND-RHIELRRVD---NVKILDRIKEIFVVSDLKDIGSNINDVIDFDESVKENRIVIKPHIDEELDHMKRTYDGLDDFLSEVAREISTTIPTEFASTLNVIYFPQLGYLITVPLKPEWKEEQDFQINGLYYQFSTATIVYYKNDKMRELDEYLGDIHGLIVDREIETVQKLQDRTLEHVPLLLNASTVCSELDCYLSLAESARRYGYRRPFLTEENILMIEKGRHPLQ 365 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9778.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9778.1.1 >prot_C-tenellus_contig9778.1.1 ID=prot_C-tenellus_contig9778.1.1|Name=mRNA_C-tenellus_contig9778.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=272bp MQAENNEISRQLRSLLSKSNDMTRTLLRIKKVSANHVDWCRLLQALESTLback to top mRNA from alignment at C-tenellus_contig9778:554..5741+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9778.1.1 ID=mRNA_C-tenellus_contig9778.1.1|Name=mRNA_C-tenellus_contig9778.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5188bp|location=Sequence derived from alignment at C-tenellus_contig9778:554..5741+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9778:554..5741+ >mRNA_C-tenellus_contig9778.1.1 ID=mRNA_C-tenellus_contig9778.1.1|Name=mRNA_C-tenellus_contig9778.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=816bp|location=Sequence derived from alignment at C-tenellus_contig9778:554..5741+ (Choristocarpus tenellus KU2346)back to top |