mRNA_C-tenellus_contig9773.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Match: A0A6H5KCH1_9PHAE (Mitochondrial inner membrane protease ATP23 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCH1_9PHAE) HSP 1 Score: 175 bits (444), Expect = 4.720e-51 Identity = 89/149 (59.73%), Postives = 110/149 (73.83%), Query Frame = 2 Query: 182 SKASEAH---NNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPQDFIHCKPCEGLEASGGW-EYGAGPEGA-SKPKVVLCEDKAMMTQWMVDHTLAHELIHAYDQCRVKVDWNDCLHHACSEIRASNTSGECSYAMEFRRGHWDWGGQQK 613 S A EA + C +M+ SL+RCPKVKF+ E+LEKLGC +P C+PCEG++ SGG+ G +G S+ +VVLC DK + Q M+DHT+AHELIHAYDQCRVK+D +CLH AC+EIRASNTSGECS+ ME RRGH WGGQQK Sbjct: 18 SNAGEAEKQLSRCEEMVQYSLQRCPKVKFIREKLEKLGCEMPTGMFTCRPCEGMDISGGFIPPTKGADGKPSRAEVVLCSDKGV-NQTMMDHTMAHELIHAYDQCRVKLDRTNCLHVACTEIRASNTSGECSFDMEVRRGHLKWGGQQK 165
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Match: A0A835Z5N3_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N3_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.420e-37 Identity = 70/146 (47.95%), Postives = 98/146 (67.12%), Query Frame = 2 Query: 170 ETVSSKASEAHNNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPQDFIHCKPCEGLEASGGW----EYGAGPEGAS-KPKVVLCEDKAMMTQW-MVDHTLAHELIHAYDQCRVKVDWNDCLHHACSEIRASNTSGECSYAMEFRRGH 589 E ++ E HN CL DK+LR P+V F+ +EK+GC LP + I C+ C+ +GG+ E GA +G +P ++LCE+ +M Q +VD TLAHEL+HA+D CRVK D+ +CLHHAC+EIRASN SGEC++ ME+ RG+ Sbjct: 1 EKLAKALLEQHNRCLAAKDKALRYSPRVTFLKAAIEKMGCKLPDESIECRRCD-ESMTGGFTLNAEAGASQQGGKPQPTIILCEEVQIMRQQRVVDSTLAHELVHAFDACRVKADFTNCLHHACTEIRASNLSGECAWKMEWDRGN 145
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Match: A0A3R7KD77_9STRA (Mitochondrial inner membrane protease ATP23 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KD77_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.720e-34 Identity = 62/144 (43.06%), Postives = 93/144 (64.58%), Query Frame = 2 Query: 185 KASEAHNNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPQDFIHCKPCEGLEASGGWEYGAGPEGASKPKVVLCEDKAMMTQWMVDHTLAHELIHAYDQCRVKVDWNDCLHHACSEIRASNTSGECSYAMEFRRGHWDWGGQQKV 616 + +E H C M +K+ +CP+VKF+++ +EK+GC + F CEG + +GG+ + KP VVLC++ +WM D T+AHELIHAYD CR K+DWN+C HHACSEIRA+ SG+C++ EF R +++ Q ++ Sbjct: 17 EVAERHQKCEDMREKAFTKCPRVKFLVDIMEKMGCKMETGFFSSVDCEG-KINGGFHL----DDKRKPGVVLCQNHIPDQEWM-DRTVAHELIHAYDHCRNKIDWNNCEHHACSEIRAAALSGDCNWKYEFFRKNFNVNQQHQI 154
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Match: W2GLV3_PHYPR (Mitochondrial inner membrane protease ATP23 n=14 Tax=Phytophthora parasitica TaxID=4792 RepID=W2GLV3_PHYPR) HSP 1 Score: 130 bits (327), Expect = 9.560e-34 Identity = 74/194 (38.14%), Postives = 112/194 (57.73%), Query Frame = 2 Query: 182 SKASEAHNNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPQDFIHCKPCEGLEASGGWEYGAGPEGASKPKVVLCEDKAMMTQWMVDHTLAHELIHAYDQCRVKVDWNDCLHHACSEIRASNTSGECSYAMEFRRGHWDWGGQQKVGNNGLVRRSGKQTNVSISRQE*YTIQCVTCDPLVLAMSMPFLEGKHLFM 763 S+ + H C M +K+L +C +VKF+++ +EK+GC L F CEG + +GG+ + KP VVLC++ +WM D T+AHELIHA+D CR K+DWN C HHACSEIRA+ SG+C++ EF R +++ Q ++ RR K +SI + + C V A S+ F++ + LF+ Sbjct: 16 SEEEQRHQECEDMREKALTKCSRVKFLVDAMEKMGCSLEPGFFSSVECEG-KINGGFHL----DDDGKPGVVLCQNHIPDQEWM-DRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQL----CTRRRAK---LSIEQND-------ACKGRVRA-SLQFVDVRTLFV 188
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Match: A0A225W3F1_9STRA (Mitochondrial inner membrane protease ATP23 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A225W3F1_9STRA) HSP 1 Score: 128 bits (321), Expect = 8.580e-33 Identity = 68/166 (40.96%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 182 SKASEAHNNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPQDFIHCKPCEGLEASGGWEYGAGPEGASKPKVVLCEDKAMMTQWMVDHTLAHELIHAYDQCRVKVDWNDCLHHACSEIRASNTSGECSYAMEFRRGHWDWGGQQKVGNNGLVRRSGKQTNVSISRQE 679 S+ + H C M +K+L +C +VKF+++ +EK+GC L F CEG + +GG+ + KP VVLC++ +WM D T+AHELIHA+D CR K+DWN C HHACSEIRA+ SG+C++ EF R +++ Q ++ RR K +SI + E Sbjct: 16 SEEEKRHQKCEDMREKALIKCSRVKFLVDAMEKMGCSLQPGFFSSVNCEG-KINGGFHL----DDEGKPGVVLCQNHIPDQEWM-DRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVNKQHQL----CTRRRAK---LSIEQNE 168
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Match: A0A6T9Z4T6_9EUKA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A6T9Z4T6_9EUKA) HSP 1 Score: 128 bits (321), Expect = 1.360e-32 Identity = 64/151 (42.38%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 143 LAMTTVSDRETVSSKASEAHNNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPQDFIHCKPCEGL-EASGGWEYGAGPEGASKPKVVLCEDKAMMTQWMVDHTLAHELIHAYDQCRVKVDWNDCLHHACSEIRASNTSGECSYAMEFRRGHW 592 +A + + + SEA C + +K+L+ P VKF+++ L+ GCP+ F C PC G E SGG++ AG +VLCE+ Q D +AHELIH +D CR KVDW DC HHACSEIRA+N SG+C + EF+RG++ Sbjct: 22 IASSMKPETSRAADAPSEARIRCESLKNKALKS-PTVKFLLDALKAEGCPVQPSFFICDPCTGYSEISGGFDPNAG--------IVLCENSLPHGQQQADRAVAHELIHVFDHCRAKVDWTDCRHHACSEIRAANLSGDCHWWQEFQRGNF 163
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Match: A0A5D6XWJ3_9STRA (Mitochondrial inner membrane protease ATP23 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWJ3_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.490e-32 Identity = 59/139 (42.45%), Postives = 91/139 (65.47%), Query Frame = 2 Query: 200 HNNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPQDFIHCKPCEGLEASGGWEYGAGPEGASKPKVVLCEDKAMMTQWMVDHTLAHELIHAYDQCRVKVDWNDCLHHACSEIRASNTSGECSYAMEFRRGHWDWGGQQKV 616 H C +M + SL +C +VKF+++ +EK+GC + + F CEG + +GG+ + A +P VVLC++ +WM D TLAHELIHA+D CR K+DWN+C HACSE+RA+ SG+C++ EF R +++ Q ++ Sbjct: 21 HERCEQMRETSLEKCSRVKFLVDIMEKMGCKMDKGFYSSVECEG-KINGGFHL----DDAGRPGVVLCQNHIPDQEWM-DRTLAHELIHAFDHCRAKMDWNNCEQHACSEVRAAALSGDCNWKYEFFRKNFNVAKQHQI 153
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Match: A0A0W8CC62_PHYNI (Mitochondrial inner membrane protease ATP23 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CC62_PHYNI) HSP 1 Score: 129 bits (325), Expect = 1.130e-31 Identity = 65/166 (39.16%), Postives = 99/166 (59.64%), Query Frame = 2 Query: 182 SKASEAHNNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPQDFIHCKPCEGLEASGGWEYGAGPEGASKPKVVLCEDKAMMTQWMVDHTLAHELIHAYDQCRVKVDWNDCLHHACSEIRASNTSGECSYAMEFRRGHWDWGGQQKVGNNGLVRRSGKQTNVSISRQE 679 S+ + H C M +K+L +C +VKF+++ +EK+GC L F CEG + +GG+ + KP VVLC++ +WM D T+AHELIHA+D CR K+DWN C HHACSEIRA+ SG+C++ EF R +++ Q ++ + S +Q + R + Sbjct: 188 SEEEQRHQECEDMREKALTKCSRVKFLVDAMEKMGCSLEPGFFSSVECEG-KINGGFHL----DDDGKPGVVLCQNHIPDQEWM-DRTMAHELIHAFDHCRNKIDWNKCEHHACSEIRAAALSGDCNWKYEFFRKNFNVSKQHQLCTRRRAKLSIEQNDACKGRAD 347
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Match: A0A7S3BYE0_9VIRI (Mitochondrial inner membrane protease ATP23 n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BYE0_9VIRI) HSP 1 Score: 124 bits (310), Expect = 2.440e-31 Identity = 62/130 (47.69%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 203 NNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPQDFIHCKPCEGLEASGGWEYGAGPEGASKPKVVLCEDKAMMTQWMVDHTLAHELIHAYDQCRVK-VDWNDCLHHACSEIRASNTSGECSYAMEFRRGH 589 N C +M++ S R P V+FM++++E+ GC +P+ FI C+ C E +GG+ G VVLC + M +Q VD L HEL+HAYDQCRVK +DW DC HHACSEIRA+N SG+C + E RG+ Sbjct: 8 NECERMVEHSRTRSPFVRFMLQKMEEAGCAVPKSFISCETCGSAEVNGGFRPDEG--------VVLCAEH-MHSQADVDAVLTHELVHAYDQCRVKNIDWCDCNHHACSEIRAANLSGDCWMSREVARGN 128
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Match: A0A8K1CCD8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCD8_PYTOL) HSP 1 Score: 124 bits (310), Expect = 3.790e-31 Identity = 65/169 (38.46%), Postives = 99/169 (58.58%), Query Frame = 2 Query: 173 TVSSKASEAHNNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPQDFIHCKPCEGLEASGGWEYGAGPEGASKPKVVLCEDKAMMTQWMVDHTLAHELIHAYDQCRVKVDWNDCLHHACSEIRASNTSGECSYAMEFRRGHWDWGGQQKVGNNGLVRRSGKQTNVSISRQE 679 T S + + +M++ SL +C +V F++E +EK+GC +P F CEG + +GG+ + +KP VVLC++ +WM D T+AHELIHA+D CR K+DW C HHACSE+RA+ SG+C + EF R +++ Q ++ RR K +SI+ E Sbjct: 15 TASDPKEAQYQHSGEMLETSLSKCSRVSFLVEMMEKMGCKMPAGFFSIVECEG-QINGGFHL----DEDNKPGVVLCQNHIADQEWM-DRTVAHELIHAFDHCRAKLDWKSCEHHACSEVRAAALSGDCDWKNEFFRKNFNIAKQHQI----CTRRRAK---LSITNNE 170 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9773.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9773.2.1 >prot_C-tenellus_contig9773.2.1 ID=prot_C-tenellus_contig9773.2.1|Name=mRNA_C-tenellus_contig9773.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=178bp MTTVSDRETVSSKASEAHNNCLKMMDKSLRRCPKVKFMIERLEKLGCPLPback to top mRNA from alignment at C-tenellus_contig9773:3743..5180+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9773.2.1 ID=mRNA_C-tenellus_contig9773.2.1|Name=mRNA_C-tenellus_contig9773.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1438bp|location=Sequence derived from alignment at C-tenellus_contig9773:3743..5180+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9773:3743..5180+ >mRNA_C-tenellus_contig9773.2.1 ID=mRNA_C-tenellus_contig9773.2.1|Name=mRNA_C-tenellus_contig9773.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=534bp|location=Sequence derived from alignment at C-tenellus_contig9773:3743..5180+ (Choristocarpus tenellus KU2346)back to top |