mRNA_C-tenellus_contig970.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig970.1.1
Unique NamemRNA_C-tenellus_contig970.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 1.100e-115
Identity = 234/455 (51.43%), Postives = 302/455 (66.37%), Query Frame = 1
Query:    1 IRYASSSNRLYLEGGGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGVFEDAKYTTYIGNRGHP-YFEIRTEQGACF 1335
            IR+++ S+RLYLE G C  LT IY +RLD  G KGPLY F+     +SDT TG+W+++S ++I   S L + G   GGDCD LL+ S  + FI +RA+GG L+++ T V SWD++A  VD + EDGRSY+SAISE  +T+P   CDG A+   GEARMDII SE+ +LGWY+SESYGIAYKVRG CKDLSN ++FD V VTGDIL S IH  YFGHYSYGHQGGNWS+N +H N+GYGFDPHDDSDY+TI+NN V             XXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXX          S+  V+DN  YGNK+GIR S+GSS + +Y N I +  G   +Y + +Y+GNDI  V  + GRPR+N+I++N +   ++   + ++D   FE N + G+   F+D+  T +  N       + + E  +CF
Sbjct:   65 IRWSNMSDRLYLENGACVTLTDIYESRLDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEV-ITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIII-NGPDAKYAIYLYQGNDIPDV--SDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCF 515          
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 2.510e-115
Identity = 222/456 (48.68%), Postives = 285/456 (62.50%), Query Frame = 1
Query:    1 IRYASSSNRLYLEGGGCTNLTSIYNARLDTLGP--KGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGVFEDAKYTTYIGNRGHPYFEIRTEQGACF 1335
            IR+++ S+RLYLE G C  +T IY +R+DT     KGP+Y F+     +++  TG+W++ S +++   + L + G   GGDCD LL+ S  + FI +RAYGG ++++ T V SWD+    VD +Y+DGRSY+SAISE  + NP   C+GMA    GEARMDII SEI +LG Y SESYGIAYKVRG C DLSN ++F+ V VTGDIL SHIHHLYFGHYSYGHQGGNWSYN VHDNVGYGFDPHDDSDYVTI+NN               XXXXXXXXXXXXXX                 XXXXXXXXXX                S+  ++ N    NK+GIR SMGS+ +  + N I V  GE  RY + +YRGND   V G+ GRPR+N +++N +   +   +  +AD N+ E N+I G+   F D+  T + GN      E + E G+CF
Sbjct:   55 IRWSTMSDRLYLENGACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGLSKGGDCDHLLLASSAEKFINVRAYGGEIMLDGTHVESWDLLEGTVDENYDDGRSYLSAISEV-IINPAMECEGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHI-VINGEDERYAIYLYRGNDTPAVEGSDGRPRNNRVFDNSLMSDNAVVMARNADDNIIEGNTIFGRESRFVDSFNTLWYGNSVPDVHEFKLEDGSCF 508          
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 1.780e-102
Identity = 224/465 (48.17%), Postives = 290/465 (62.37%), Query Frame = 1
Query:   31 YLEGGGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEI--------------------AYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGVFEDAKYTTYIGNRGHP-YFEIRTEQGACF 1335
            YLE G C  LT IY +R D  G KGPLY F+     +SDT TG+W+++S ++I   S L + G   GGDCD LL+ S  + FI +RA+GG L+++ T V SWD++A  VD + EDGRSY+SAISE  +T+P   CDG A+   GEARMDII SE+                      LGWY+SESYGI+YKVRG C DLSN ++FD V VTGDIL S IH  YFGHYSYGHQGGNWS+N +H N+GYGFDPHDDSDY+TI+NN V+            XXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXX          S+  V+DN  YG+K+GIR S+GSS + +Y N I +  G   +Y + +Y+GNDI  V  + GR R+N+I++N +   +Q   + ++D   FE N + G+   F+++  T +  N       + + E  +CF
Sbjct:   35 YLENGACVTLTDIYESRSDDSGNKGPLYPFDETALDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEV-ITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIHNNEVYXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGSKNGIRMSLGSSDNLLYENDIII-NGPDAKYAIYLYQGNDIPDV--SDGRLRNNHIFDNSLVSDNQVVKMLNSDDTAFEGNVVYGRVSRFKNSFNTLWKSNFVEDGIHDYKLELNSCF 495          
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 5.560e-90
Identity = 180/461 (39.05%), Postives = 248/461 (53.80%), Query Frame = 1
Query:    1 IRYASSSNRLYLEG-------GGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--HVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADW-----NVFENNSIGGQYGVFEDAKYTTYIGNRG--HPYFEIRTEQGACF 1335
            IRYA ++ RLYLE        GGC  L  I+ +R      KGPLY  + +   VS + TGTW +  ++++E    L++ GS+ GGD D L + S ++ FI +RA+GG L   +T V SWD S    D D  DGRSYISAISE  +T+    C+G A+ T GEARMDI  SEI YLG+++SESYG+ +KVRG C+D SN ++FD V V G++ +S IHH+ FG Y+YGHQ G+W  N +HDN GYGFDPHDDSD++TI++N V+NNG+HGIIASKR                                                   +  V++N F  NK+G+R+S+G +   V+ N       E+  Y  L     D+V    +SGR ++N    N  +  ++   I  AD      NVFE     G    F++A      GN G     FE++ +  ACF
Sbjct:   46 IRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAG----KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEI-ITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCA-DNVFSNNTISNNAEYNAYSYLGTDEPDVV----SSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACF 496          
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 9.680e-89
Identity = 181/460 (39.35%), Postives = 246/460 (53.48%), Query Frame = 1
Query:    1 IRYASSSNRLYLEG------GGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--HVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADW-----NVFENNSIGGQYGVFEDAKYTTYIGNRG--HPYFEIRTEQGACF 1335
            IRYA ++ RLYLE       GGC  L  I+ +R      K PLY  + +   VS+T TGTW +  ++++E    L++ G+D GGD D L + S  + +I +RA+GG L    T V SWD S    D D  DGRSYISA+SE  +T+    C+G A+ T GEARMDI  SEI YLG+ +SESYG+ +KVRG CKD SN +IFD V V G++ +S IHHL FG Y+YGHQ G+W  N +HDN GYGFDPHDDSD++TI++N V+NNG+HGIIASKR                                                   +  V++N F  NK+G+R S+G +   V+   I      +++Y    Y G+D   V  +SGR ++N    N  +  ++   I  AD      NVFE     G    F+DA  +   GN G     FE++    +CF
Sbjct:   51 IRYAGTTKRLYLESADGETRGGCATLGQIWESRAG----KAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEI-VTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCA-DNVFSENII---SNNSKYNAYTYLGSDEPDVV-SSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCF 500          
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 1.570e-87
Identity = 218/429 (50.82%), Postives = 274/429 (63.87%), Query Frame = 1
Query:    1 IRYASSSNRLYLEGGGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQ----GFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCD------------GMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVK---------VTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGT-SGRPRSNYIY-NNYVNHQDQAFLISHAD 1206
            I +A SSNRLY++G GC  +  IY  R D LG KGPLYYF+ E   +S+T+TG +++DS++ I   + LE+ G+     C+ LLM  +D       + IRA+GG L++ +T + SWD++    D +  +GR Y+SAI+E       + C             G A+   G ARMDI  SE+AYLG+  SESYGI+YK RGLCK L N DIFD  +         V GDI  S IH+ +FGHYSYGHQGG W  N V+DNVGYGFDPHDDSD++ I  N V+ NG+HGIIASKR     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS   V DN F  N  G+RWS G++ + VY N + V  G+   Y + +YRGND     G   G PR N IY NN  + ++ A+L + AD
Sbjct:   39 ISWAESSNRLYIDG-GCATMADIYEDRSDNLGAKGPLYYFDQENNVISETYTGVYYLDSNIHIRNGATLEIDGTGALA-CETLLMAGNDDITGSDSLNIRAHGGNLVVRDTKIFSWDITTGTYDTNTGNGRPYLSAITEFITGRDEDLCPSDTQAGEDGYSTGQAKEQMGVARMDIYDSELAYLGYSESESYGISYKARGLCKTLENVDIFDDDQDFPVYGAYAVYGDIYRSKIHNNWFGHYSYGHQGGKWIDNDVYDNVGYGFDPHDDSDHLEIRGNKVWGNGYHGIIASKRCTDITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDCDVYDNVFENNPRGVRWSNGANRNNVYSNTMTVGSGDDDDYAIYLYRGNDEPEADGNPDGHPRDNKIYDNNIYSGKEVAWLTTDAD 465          
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 5.060e-85
Identity = 191/454 (42.07%), Postives = 256/454 (56.39%), Query Frame = 1
Query:    1 IRYASSSNRLYLEG------GGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--HVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGV-FEDAKYTTYIGNRGHPYFEIRTEQGACF 1335
            IRY+S   RLYLE       GGC  L  I+  +      + PLY  + +   +SD+ TGTW +  ++F+E    L++ G+  GGD D L + S    FI +RA+GG L   +T V +WD S    D D EDGRSY+SA+SE  +T+    C+G A+   GEARMDI  SE+ YLG++ SESYG+ +KVRG C D SN D+F+ V V G+I +S IHH  FG Y+YGHQ G+W  N +HDN GYGFDPHDDSD++TI++N V++NG+HGIIASKR                         XXXXXXXXXXXXXXXX          +  V+DN F  NK+GIR+S+GS  +  + N I  +    TRY    Y G+D   V   SGR + N    N +    ++  +  AD   F +N+      + F DAK T   GN G    +++   GA F
Sbjct:   44 IRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRG----EAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEV-ITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGS----TRYSTYSYLGSDAPDVV-DSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASF 487          
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 5.700e-84
Identity = 143/275 (52.00%), Postives = 187/275 (68.00%), Query Frame = 1
Query:    1 IRYASSSNRLYLEG-------GGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKR 804
            IRYA S+ RLYLE        GGC  L  I+ +R      KGPLY  + +   VS + TGTW +  ++++E    LE+ GS+ GGD D L + S ++ FI +RA+GG L   +T V SWD S    D D  DGRSYISAISE  +T+    C+G A+ T GEARMDI  SEI YLG+++SESYG+ +KVRG C+D SN ++FD V V G++ +S IHH+ FG Y+YGHQ G+W  N +HDN GYGFDPHDDSD++TI++N V+NNG+HGIIASKR
Sbjct:   46 IRYAESTARLYLESADNGTTRGGCVTLGQIWESRAG----KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEI-ITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKR 315          
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 1.870e-81
Identity = 175/465 (37.63%), Postives = 248/465 (53.33%), Query Frame = 1
Query:    1 IRYASSSNRLYLEGG------GCTNLTSIYNARLD--TLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKS----DDQG---FIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGVFEDAKYTTYI--GNRG-HPYFEIRTEQGACF 1335
            IRY++++ RLYLE G      GC  +  I+ AR    T G K PLY  +      SD  TGTW ++ D+++E    L++ G+  GG  D L +KS    +D G   +I +RA+GG L  E+T V  WD +    D D  DGRSYISA+SE  + +P   C+G A+ T GEARMDI+ SE+ Y+G+++SESYG+ +KVRG CKD SN ++FD V V G+I +S +HH+ F  Y+YGHQ G+W  N VH N GYG+DPHDDSD++TI++N V++N WHGIIASKR                                                  S+  ++ N F GNK+GIR S+G   + V  N +       ++Y +  Y+G+D   V  T GR + N   +N V    QA  +  +D     NN +  + G+ E +  T  +  GN G     E+   + ACF
Sbjct:  123 IRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVL-DPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMT----NTSQYAIYTYQGSDPAEVQPT-GRSQDNIFDSNTVVGGPQAIKLKESDGTRITNN-VFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580          
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 2.850e-80
Identity = 165/454 (36.34%), Postives = 233/454 (51.32%), Query Frame = 1
Query:    1 IRYASSSNRLYLEG------GGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--HVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGV-FEDAKYTTYIGNRGHPYFEIRTEQGACF 1335
            +RY + S RLY+E       GGC  L  I+  ++D      PLY  + +   VS + TGTW +  ++++E    L++ G   GGD D L + S    FI +RAYGG L   +T V +WD S    D D  DGRSYISA+SE  +T+    C+G A+   GEARMDI  SE+AYLG++ +E+YG+ +KVRG C D  N ++FD V V G+I +S IHH  FG Y+YGHQ G+W  N +HDN GYGFDPHDDSD++TI++N V+NNG+HGIIASKR                                                   +  V+DN F  NK+G+R S+G     ++   +     E   +  L     ++V     SGR + N    N +    ++ L+  AD   F +N+      + F DA  T   GN G     ++ ++GA F
Sbjct:   18 VRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDG----SPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEV-ITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCG-RNIFSKNVITGSAEFNTFSYLGADKPEVV----DSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATF 461          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZF8_ECTSI1.100e-11551.43Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FZF9_ECTSI2.510e-11548.68Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5KBD3_9PHAE1.780e-10248.17MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G339_ECTSI5.560e-9039.05Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI9.680e-8939.35Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JUS5_9PHAE1.570e-8750.82MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ7_9PHAE5.060e-8542.07Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7FXE5_ECTSI5.700e-8452.00Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LD45_ECTSI1.870e-8137.63Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE2.850e-8036.34Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig970contigC-tenellus_contig970:9365..12399 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LC73
PFAMsWSC
Model size1335
Max annot lvl2759|Eukaryota
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
Exons9
Evalue2.53e-78
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota
Descriptionprotein xylosyltransferase activity
Cds size1335
COG categoryU
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig970.1.1prot_C-tenellus_contig970.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig970 9365..12399 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790197.0436041-CDS-C-tenellus_contig970:9364..96191680790197.0436041-CDS-C-tenellus_contig970:9364..9619Choristocarpus tenellus KU2346CDSC-tenellus_contig970 9365..9619 +
1680790197.0580602-CDS-C-tenellus_contig970:9760..98881680790197.0580602-CDS-C-tenellus_contig970:9760..9888Choristocarpus tenellus KU2346CDSC-tenellus_contig970 9761..9888 +
1680790197.0751407-CDS-C-tenellus_contig970:10156..102721680790197.0751407-CDS-C-tenellus_contig970:10156..10272Choristocarpus tenellus KU2346CDSC-tenellus_contig970 10157..10272 +
1680790197.086783-CDS-C-tenellus_contig970:10644..107361680790197.086783-CDS-C-tenellus_contig970:10644..10736Choristocarpus tenellus KU2346CDSC-tenellus_contig970 10645..10736 +
1680790197.100119-CDS-C-tenellus_contig970:10965..111991680790197.100119-CDS-C-tenellus_contig970:10965..11199Choristocarpus tenellus KU2346CDSC-tenellus_contig970 10966..11199 +
1680790197.1151597-CDS-C-tenellus_contig970:11343..115091680790197.1151597-CDS-C-tenellus_contig970:11343..11509Choristocarpus tenellus KU2346CDSC-tenellus_contig970 11344..11509 +
1680790197.1280556-CDS-C-tenellus_contig970:11724..118231680790197.1280556-CDS-C-tenellus_contig970:11724..11823Choristocarpus tenellus KU2346CDSC-tenellus_contig970 11725..11823 +
1680790197.141313-CDS-C-tenellus_contig970:11975..121061680790197.141313-CDS-C-tenellus_contig970:11975..12106Choristocarpus tenellus KU2346CDSC-tenellus_contig970 11976..12106 +
1680790197.2767687-CDS-C-tenellus_contig970:12285..123991680790197.2767687-CDS-C-tenellus_contig970:12285..12399Choristocarpus tenellus KU2346CDSC-tenellus_contig970 12286..12399 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig970.1.1

>prot_C-tenellus_contig970.1.1 ID=prot_C-tenellus_contig970.1.1|Name=mRNA_C-tenellus_contig970.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=445bp
IRYASSSNRLYLEGGGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDT
WTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGG
RLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQ
VTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKV
TGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTI
NNNHVFNNGWHGIIASKRCDHVSIKNNIVHDNGYNGIMLHRSCNYSVITN
NTAFDNGDSGLALYESSHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIY
VAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISH
ADWNVFENNSIGGQYGVFEDAKYTTYIGNRGHPYFEIRTEQGACF
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mRNA from alignment at C-tenellus_contig970:9365..12399+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig970.1.1 ID=mRNA_C-tenellus_contig970.1.1|Name=mRNA_C-tenellus_contig970.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3035bp|location=Sequence derived from alignment at C-tenellus_contig970:9365..12399+ (Choristocarpus tenellus KU2346)
ATTAGATACGCCTCTTCGAGTAATCGTCTGTACCTCGAGGGTGGAGGGTG CACGAACTTGACATCGATTTACAATGCAAGATTGGACACTTTAGGACCCA AGGGTCCTCTCTACTACTTCAACCTCGAAAAAAAGACTGTCTCGGACACA TGGACTGGCACATGGTTCATTGACTCTGATGTCTTCATTGAAGGCGATTC CCTACTCGAGCTTACAGGATCGGACATTGGAGGGGACTGTGACAGACTTC TCATGGTAAGTCCTTCTAGCACACGCTCTTACAATGCCTAGTGACATGCC TCCTCTTTTTCGAGATTGAAAAAGAGGAAAAACGTTCCTCCACGACCTCC TACCAGTACCGATACTCCTTTACTACATCCCCCACTTACCTCTCAGAAAA GCGATGACCAAGGGTTCATTCAGATTCGTGCTTACGGTGGACGGTTGCTC ATTGAAAACACTGTGGTTACTTCGTGGGACATGAGTGCTATGGATGTAGA CCACGATTATGAGGACGGGCGAAGGTATGTGTCGTTAGCACGATGTTTCC AATCGATAATCAAGTTTACTGAAGTCGTATAGAGCAGGTGTTGATTGGTG GGCTATGACTTCCTTTCATTCGTAAAGCAATTTTTTGTATATCTTACGGA CATCAGGTTCCATCTCTTTACATCTTCGCAATGCACTAGAAATTGTCTTG AAAGGTGTCTCCATCATTGAAGTGCTTTTTGATTTCTAATCCTGTTCGCG AACCTTTTGATATTTTCGTTGTGACTGATTCTATTAAAACAGCTATATCA GCGCCATCAGTGAGACACAGATGACTAACCCTGTAAATGGTTGCGATGGC ATGGCACAAGTGACTAAGGGCGAGGCTCGAATGGATATTATCAAGAGTGA AATTGCATGTAAGTGGTGTATTGCAAGGTATTGACAGGTTTCGTTTTCCA ACCCGCCCTCTGCACAGGATTTCGAATACATCAACTCCTCCAGATGTATG AACTACTGTGATGTTCAGGCTGGGTAGAGAATATTTTTCATCCTACTAAT TCCTTTTCTTGACCTTCTCTACGTATTAGAAAAGATTACATTCGTTTTAA AAGTCTAGCAGGGTCCAAATACTTTGTATTTCCCGCACAAGGTTGAAGTT CCCATGTACTTGAATACTGGTGTATGTGCTTGCTACACATGAATAATAGT TTCTGTACTAAACTTATATCTTCCGTTTGTTGCCAGTCCATGCTCTTAAT AATAATCTCTTACATCAATTTGTGACACAGACCTTGGCTGGTACAATTCA GAATCCTACGGTATTGCGTACAAGGTTCGTGGACTCTGCAAGGACCTCAG CAATGAGGATATCTTTGATCATGTAAGTATTGGTTTGAAAAAAATCGATA AATTAATGTTTTTTTAGATGCCAAGTATTGTTACAGCTTATTCAGGTTAC GTTTCTAACAAAATGAACGTAGTTATTACAATGTGATGTTAAATGATACT AGGGTGTCAAGCCATCTCTTCACTATCATTGTGAATATTCTACTGAACTT AACTTTTCTCCATCTAAACTGCCAACATATTGTGCACGTTGTAAAACATA GGTTAAAGTAACAGGGGACATTCTCAACTCACACATCCACCACCTATACT TCGGGCATTACTCTTACGGGCACCAAGGTGGCAACTGGAGCTACAATGTT GTACACGACAATGTTGGCTACGGCTTTGATCCCCATGATGACAGTGACTA TGTGACAATCAACAACAACCATGTGTTTAACAATGGGTGGCATGGGATCA TTGCCTCAAAGCGTTGCGATCATGTCAGCATTAAGGTAAGATCTGAATTT TGAAGGTAAATCTGAATAGTGTCACCCCACATGTTGAGAACAGAAAGATC AGCATACATGTATTTAATGAGAATCAGATGCTGAAAGTTCGTCTATTCTT CCCATTTGATGTTTTCAACTGAATCCCAGAACAACATCGTACACGACAAT GGGTACAATGGGATCATGCTACACCGTTCCTGTAACTACTCTGTCATAAC CAACAACACTGCCTTCGACAATGGTGACTCTGGTCTTGCACTGTATGAGA GTTCACATGTGCTAGTCAACGACAACTACTTCTATGGCAACAAACGTGAG TTTGTTTTTCAATGTTTCAGCAGCACACTTTTTACCTGTTCCGCTTTCAA ATGTGCCTCGAATCAAATAGTGATCCAAAAATGCTGTCTCGAAAACTGAA CAAAGTCGAACGTATACAGTGAAAAATACTCAGCTTGTGCAGGTGTACTT ACGTTCTGCTTTGCTAGCCTAACCCCATCTATGTTGGATCCTATGGTTTG CACATTTCAGATGGAATTCGGTGGAGCATGGGTTCTTCCTTCTCCAAGGT CTACGGCAACAAGATTTATGTTGCAGAGGGGGAGCATACTAGATACGGCC TTCTGATGTGTGAGTGATGTAGCAAAACTCGCATGGTATGGAAATGTTGA TTTTCTTGGAAAAAGTATCAAACGATTCACAATTTACAACAGTTTTAGGT GGGTGAGGTGTGTTACCGACAAAATAAACCTTCTGACTTCCACCTTACCT TGTACATACAGATAGAGGAAATGATATTGTTGGAGTACCTGGGACTTCTG GTCGCCCTAGGTCAAACTATATCTACAATAACTACGTCAACCACCAAGAC CAGGCCTTCCTAATCTCACATGCTGACTGGAATGTGTTCGAGGTAACTAT AAACATAGGTGTAAGATGAGTAAAGAATGTAGTATAATTTTATTTTTTCA GTCTTTTGTGGTTGTATCACTCACTACATTTTATTCAACTTTTATTTTTG TATTGAATAATGCAATCTCTAAACCAACTGATACTGATCTTGCCTACTAC ATACCTCTTATCTTCTCACAGAACAATTCAATTGGAGGACAGTATGGTGT GTTTGAGGATGCTAAGTACACGACGTACATTGGCAACCGTGGACACCCAT ATTTTGAGATCCGTACTGAGCAAGGTGCTTGCTTC
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Coding sequence (CDS) from alignment at C-tenellus_contig970:9365..12399+

>mRNA_C-tenellus_contig970.1.1 ID=mRNA_C-tenellus_contig970.1.1|Name=mRNA_C-tenellus_contig970.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1335bp|location=Sequence derived from alignment at C-tenellus_contig970:9365..12399+ (Choristocarpus tenellus KU2346)
ATTAGATACGCCTCTTCGAGTAATCGTCTGTACCTCGAGGGTGGAGGGTG
CACGAACTTGACATCGATTTACAATGCAAGATTGGACACTTTAGGACCCA
AGGGTCCTCTCTACTACTTCAACCTCGAAAAAAAGACTGTCTCGGACACA
TGGACTGGCACATGGTTCATTGACTCTGATGTCTTCATTGAAGGCGATTC
CCTACTCGAGCTTACAGGATCGGACATTGGAGGGGACTGTGACAGACTTC
TCATGAAAAGCGATGACCAAGGGTTCATTCAGATTCGTGCTTACGGTGGA
CGGTTGCTCATTGAAAACACTGTGGTTACTTCGTGGGACATGAGTGCTAT
GGATGTAGACCACGATTATGAGGACGGGCGAAGCTATATCAGCGCCATCA
GTGAGACACAGATGACTAACCCTGTAAATGGTTGCGATGGCATGGCACAA
GTGACTAAGGGCGAGGCTCGAATGGATATTATCAAGAGTGAAATTGCATA
CCTTGGCTGGTACAATTCAGAATCCTACGGTATTGCGTACAAGGTTCGTG
GACTCTGCAAGGACCTCAGCAATGAGGATATCTTTGATCATGTTAAAGTA
ACAGGGGACATTCTCAACTCACACATCCACCACCTATACTTCGGGCATTA
CTCTTACGGGCACCAAGGTGGCAACTGGAGCTACAATGTTGTACACGACA
ATGTTGGCTACGGCTTTGATCCCCATGATGACAGTGACTATGTGACAATC
AACAACAACCATGTGTTTAACAATGGGTGGCATGGGATCATTGCCTCAAA
GCGTTGCGATCATGTCAGCATTAAGAACAACATCGTACACGACAATGGGT
ACAATGGGATCATGCTACACCGTTCCTGTAACTACTCTGTCATAACCAAC
AACACTGCCTTCGACAATGGTGACTCTGGTCTTGCACTGTATGAGAGTTC
ACATGTGCTAGTCAACGACAACTACTTCTATGGCAACAAACATGGAATTC
GGTGGAGCATGGGTTCTTCCTTCTCCAAGGTCTACGGCAACAAGATTTAT
GTTGCAGAGGGGGAGCATACTAGATACGGCCTTCTGATGTATAGAGGAAA
TGATATTGTTGGAGTACCTGGGACTTCTGGTCGCCCTAGGTCAAACTATA
TCTACAATAACTACGTCAACCACCAAGACCAGGCCTTCCTAATCTCACAT
GCTGACTGGAATGTGTTCGAGAACAATTCAATTGGAGGACAGTATGGTGT
GTTTGAGGATGCTAAGTACACGACGTACATTGGCAACCGTGGACACCCAT
ATTTTGAGATCCGTACTGAGCAAGGTGCTTGCTTC
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