mRNA_C-tenellus_contig970.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI) HSP 1 Score: 359 bits (921), Expect = 1.100e-115 Identity = 234/455 (51.43%), Postives = 302/455 (66.37%), Query Frame = 1 Query: 1 IRYASSSNRLYLEGGGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGVFEDAKYTTYIGNRGHP-YFEIRTEQGACF 1335 IR+++ S+RLYLE G C LT IY +RLD G KGPLY F+ +SDT TG+W+++S ++I S L + G GGDCD LL+ S + FI +RA+GG L+++ T V SWD++A VD + EDGRSY+SAISE +T+P CDG A+ GEARMDII SE+ +LGWY+SESYGIAYKVRG CKDLSN ++FD V VTGDIL S IH YFGHYSYGHQGGNWS+N +H N+GYGFDPHDDSDY+TI+NN V XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX S+ V+DN YGNK+GIR S+GSS + +Y N I + G +Y + +Y+GNDI V + GRPR+N+I++N + ++ + ++D FE N + G+ F+D+ T + N + + E +CF Sbjct: 65 IRWSNMSDRLYLENGACVTLTDIYESRLDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEV-ITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIII-NGPDAKYAIYLYQGNDIPDV--SDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCF 515
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI) HSP 1 Score: 358 bits (918), Expect = 2.510e-115 Identity = 222/456 (48.68%), Postives = 285/456 (62.50%), Query Frame = 1 Query: 1 IRYASSSNRLYLEGGGCTNLTSIYNARLDTLGP--KGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGVFEDAKYTTYIGNRGHPYFEIRTEQGACF 1335 IR+++ S+RLYLE G C +T IY +R+DT KGP+Y F+ +++ TG+W++ S +++ + L + G GGDCD LL+ S + FI +RAYGG ++++ T V SWD+ VD +Y+DGRSY+SAISE + NP C+GMA GEARMDII SEI +LG Y SESYGIAYKVRG C DLSN ++F+ V VTGDIL SHIHHLYFGHYSYGHQGGNWSYN VHDNVGYGFDPHDDSDYVTI+NN XXXXXXXXXXXXXX XXXXXXXXXX S+ ++ N NK+GIR SMGS+ + + N I V GE RY + +YRGND V G+ GRPR+N +++N + + + +AD N+ E N+I G+ F D+ T + GN E + E G+CF Sbjct: 55 IRWSTMSDRLYLENGACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGLSKGGDCDHLLLASSAEKFINVRAYGGEIMLDGTHVESWDLLEGTVDENYDDGRSYLSAISEV-IINPAMECEGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHI-VINGEDERYAIYLYRGNDTPAVEGSDGRPRNNRVFDNSLMSDNAVVMARNADDNIIEGNTIFGRESRFVDSFNTLWYGNSVPDVHEFKLEDGSCF 508
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE) HSP 1 Score: 324 bits (831), Expect = 1.780e-102 Identity = 224/465 (48.17%), Postives = 290/465 (62.37%), Query Frame = 1 Query: 31 YLEGGGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEI--------------------AYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------SHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGVFEDAKYTTYIGNRGHP-YFEIRTEQGACF 1335 YLE G C LT IY +R D G KGPLY F+ +SDT TG+W+++S ++I S L + G GGDCD LL+ S + FI +RA+GG L+++ T V SWD++A VD + EDGRSY+SAISE +T+P CDG A+ GEARMDII SE+ LGWY+SESYGI+YKVRG C DLSN ++FD V VTGDIL S IH YFGHYSYGHQGGNWS+N +H N+GYGFDPHDDSDY+TI+NN V+ XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX S+ V+DN YG+K+GIR S+GSS + +Y N I + G +Y + +Y+GNDI V + GR R+N+I++N + +Q + ++D FE N + G+ F+++ T + N + + E +CF Sbjct: 35 YLENGACVTLTDIYESRSDDSGNKGPLYPFDETALDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKFINVRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEV-ITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIHNNEVYXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGSKNGIRMSLGSSDNLLYENDIII-NGPDAKYAIYLYQGNDIPDV--SDGRLRNNHIFDNSLVSDNQVVKMLNSDDTAFEGNVVYGRVSRFKNSFNTLWKSNFVEDGIHDYKLELNSCF 495
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 291 bits (745), Expect = 5.560e-90 Identity = 180/461 (39.05%), Postives = 248/461 (53.80%), Query Frame = 1 Query: 1 IRYASSSNRLYLEG-------GGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--HVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADW-----NVFENNSIGGQYGVFEDAKYTTYIGNRG--HPYFEIRTEQGACF 1335 IRYA ++ RLYLE GGC L I+ +R KGPLY + + VS + TGTW + ++++E L++ GS+ GGD D L + S ++ FI +RA+GG L +T V SWD S D D DGRSYISAISE +T+ C+G A+ T GEARMDI SEI YLG+++SESYG+ +KVRG C+D SN ++FD V V G++ +S IHH+ FG Y+YGHQ G+W N +HDN GYGFDPHDDSD++TI++N V+NNG+HGIIASKR + V++N F NK+G+R+S+G + V+ N E+ Y L D+V +SGR ++N N + ++ I AD NVFE G F++A GN G FE++ + ACF Sbjct: 46 IRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAG----KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEI-ITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCA-DNVFSNNTISNNAEYNAYSYLGTDEPDVV----SSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACF 496
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 288 bits (737), Expect = 9.680e-89 Identity = 181/460 (39.35%), Postives = 246/460 (53.48%), Query Frame = 1 Query: 1 IRYASSSNRLYLEG------GGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--HVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADW-----NVFENNSIGGQYGVFEDAKYTTYIGNRG--HPYFEIRTEQGACF 1335 IRYA ++ RLYLE GGC L I+ +R K PLY + + VS+T TGTW + ++++E L++ G+D GGD D L + S + +I +RA+GG L T V SWD S D D DGRSYISA+SE +T+ C+G A+ T GEARMDI SEI YLG+ +SESYG+ +KVRG CKD SN +IFD V V G++ +S IHHL FG Y+YGHQ G+W N +HDN GYGFDPHDDSD++TI++N V+NNG+HGIIASKR + V++N F NK+G+R S+G + V+ I +++Y Y G+D V +SGR ++N N + ++ I AD NVFE G F+DA + GN G FE++ +CF Sbjct: 51 IRYAGTTKRLYLESADGETRGGCATLGQIWESRAG----KAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEI-VTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCA-DNVFSENII---SNNSKYNAYTYLGSDEPDVV-SSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCF 500
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE) HSP 1 Score: 291 bits (744), Expect = 1.570e-87 Identity = 218/429 (50.82%), Postives = 274/429 (63.87%), Query Frame = 1 Query: 1 IRYASSSNRLYLEGGGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQ----GFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCD------------GMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVK---------VTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGT-SGRPRSNYIY-NNYVNHQDQAFLISHAD 1206 I +A SSNRLY++G GC + IY R D LG KGPLYYF+ E +S+T+TG +++DS++ I + LE+ G+ C+ LLM +D + IRA+GG L++ +T + SWD++ D + +GR Y+SAI+E + C G A+ G ARMDI SE+AYLG+ SESYGI+YK RGLCK L N DIFD + V GDI S IH+ +FGHYSYGHQGG W N V+DNVGYGFDPHDDSD++ I N V+ NG+HGIIASKR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS V DN F N G+RWS G++ + VY N + V G+ Y + +YRGND G G PR N IY NN + ++ A+L + AD Sbjct: 39 ISWAESSNRLYIDG-GCATMADIYEDRSDNLGAKGPLYYFDQENNVISETYTGVYYLDSNIHIRNGATLEIDGTGALA-CETLLMAGNDDITGSDSLNIRAHGGNLVVRDTKIFSWDITTGTYDTNTGNGRPYLSAITEFITGRDEDLCPSDTQAGEDGYSTGQAKEQMGVARMDIYDSELAYLGYSESESYGISYKARGLCKTLENVDIFDDDQDFPVYGAYAVYGDIYRSKIHNNWFGHYSYGHQGGKWIDNDVYDNVGYGFDPHDDSDHLEIRGNKVWGNGYHGIIASKRCTDITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDCDVYDNVFENNPRGVRWSNGANRNNVYSNTMTVGSGDDDDYAIYLYRGNDEPEADGNPDGHPRDNKIYDNNIYSGKEVAWLTTDAD 465
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 278 bits (711), Expect = 5.060e-85 Identity = 191/454 (42.07%), Postives = 256/454 (56.39%), Query Frame = 1 Query: 1 IRYASSSNRLYLEG------GGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--HVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGV-FEDAKYTTYIGNRGHPYFEIRTEQGACF 1335 IRY+S RLYLE GGC L I+ + + PLY + + +SD+ TGTW + ++F+E L++ G+ GGD D L + S FI +RA+GG L +T V +WD S D D EDGRSY+SA+SE +T+ C+G A+ GEARMDI SE+ YLG++ SESYG+ +KVRG C D SN D+F+ V V G+I +S IHH FG Y+YGHQ G+W N +HDN GYGFDPHDDSD++TI++N V++NG+HGIIASKR XXXXXXXXXXXXXXXX + V+DN F NK+GIR+S+GS + + N I + TRY Y G+D V SGR + N N + ++ + AD F +N+ + F DAK T GN G +++ GA F Sbjct: 44 IRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRG----EAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEV-ITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGS----TRYSTYSYLGSDAPDVV-DSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASF 487
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 272 bits (696), Expect = 5.700e-84 Identity = 143/275 (52.00%), Postives = 187/275 (68.00%), Query Frame = 1 Query: 1 IRYASSSNRLYLEG-------GGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKR 804 IRYA S+ RLYLE GGC L I+ +R KGPLY + + VS + TGTW + ++++E LE+ GS+ GGD D L + S ++ FI +RA+GG L +T V SWD S D D DGRSYISAISE +T+ C+G A+ T GEARMDI SEI YLG+++SESYG+ +KVRG C+D SN ++FD V V G++ +S IHH+ FG Y+YGHQ G+W N +HDN GYGFDPHDDSD++TI++N V+NNG+HGIIASKR Sbjct: 46 IRYAESTARLYLESADNGTTRGGCVTLGQIWESRAG----KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEI-ITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKR 315
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 271 bits (694), Expect = 1.870e-81 Identity = 175/465 (37.63%), Postives = 248/465 (53.33%), Query Frame = 1 Query: 1 IRYASSSNRLYLEGG------GCTNLTSIYNARLD--TLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKS----DDQG---FIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SHVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGVFEDAKYTTYI--GNRG-HPYFEIRTEQGACF 1335 IRY++++ RLYLE G GC + I+ AR T G K PLY + SD TGTW ++ D+++E L++ G+ GG D L +KS +D G +I +RA+GG L E+T V WD + D D DGRSYISA+SE + +P C+G A+ T GEARMDI+ SE+ Y+G+++SESYG+ +KVRG CKD SN ++FD V V G+I +S +HH+ F Y+YGHQ G+W N VH N GYG+DPHDDSD++TI++N V++N WHGIIASKR S+ ++ N F GNK+GIR S+G + V N + ++Y + Y+G+D V T GR + N +N V QA + +D NN + + G+ E + T + GN G E+ + ACF Sbjct: 123 IRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVL-DPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMT----NTSQYAIYTYQGSDPAEVQPT-GRSQDNIFDSNTVVGGPQAIKLKESDGTRITNN-VFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 265 bits (677), Expect = 2.850e-80 Identity = 165/454 (36.34%), Postives = 233/454 (51.32%), Query Frame = 1 Query: 1 IRYASSSNRLYLEG------GGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTWTGTWFIDSDVFIEGDSLLELTGSDIGGDCDRLLMKSDDQGFIQIRAYGGRLLIENTVVTSWDMSAMDVDHDYEDGRSYISAISETQMTNPVNGCDGMAQVTKGEARMDIIKSEIAYLGWYNSESYGIAYKVRGLCKDLSNEDIFDHVKVTGDILNSHIHHLYFGHYSYGHQGGNWSYNVVHDNVGYGFDPHDDSDYVTINNNHVFNNGWHGIIASKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--HVLVNDNYFYGNKHGIRWSMGSSFSKVYGNKIYVAEGEHTRYGLLMYRGNDIVGVPGTSGRPRSNYIYNNYVNHQDQAFLISHADWNVFENNSIGGQYGV-FEDAKYTTYIGNRGHPYFEIRTEQGACF 1335 +RY + S RLY+E GGC L I+ ++D PLY + + VS + TGTW + ++++E L++ G GGD D L + S FI +RAYGG L +T V +WD S D D DGRSYISA+SE +T+ C+G A+ GEARMDI SE+AYLG++ +E+YG+ +KVRG C D N ++FD V V G+I +S IHH FG Y+YGHQ G+W N +HDN GYGFDPHDDSD++TI++N V+NNG+HGIIASKR + V+DN F NK+G+R S+G ++ + E + L ++V SGR + N N + ++ L+ AD F +N+ + F DA T GN G ++ ++GA F Sbjct: 18 VRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDG----SPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEV-ITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCG-RNIFSKNVITGSAEFNTFSYLGADKPEVV----DSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATF 461 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig970.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig970.1.1 >prot_C-tenellus_contig970.1.1 ID=prot_C-tenellus_contig970.1.1|Name=mRNA_C-tenellus_contig970.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=445bp IRYASSSNRLYLEGGGCTNLTSIYNARLDTLGPKGPLYYFNLEKKTVSDTback to top mRNA from alignment at C-tenellus_contig970:9365..12399+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig970.1.1 ID=mRNA_C-tenellus_contig970.1.1|Name=mRNA_C-tenellus_contig970.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3035bp|location=Sequence derived from alignment at C-tenellus_contig970:9365..12399+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig970:9365..12399+ >mRNA_C-tenellus_contig970.1.1 ID=mRNA_C-tenellus_contig970.1.1|Name=mRNA_C-tenellus_contig970.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1335bp|location=Sequence derived from alignment at C-tenellus_contig970:9365..12399+ (Choristocarpus tenellus KU2346)back to top |