mRNA_C-tenellus_contig97.7.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Match: D7FUB1_ECTSI (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB1_ECTSI) HSP 1 Score: 229 bits (584), Expect = 1.270e-68 Identity = 118/211 (55.92%), Postives = 141/211 (66.82%), Query Frame = 1 Query: 61 KQPDL--PEMDEETIKK-----GMDQYLSAKYKNVTPAAIPQGPQEPSESLPENQVEIMAIDPLPPAQQGRKVVISQRSKAATTSGRYG-LHTWNLDFKNQERWSNPLMGWTSTGDPMSNLSLKFDTPEQAVHFCKKRGWDYEVKLPLQSEQVLGATKYAHNFLPMDIEREIKVKKTESKHFAFPTVGASHYLRPLNFHGTGQVRQHGNPE 669 K PD P +EE KK +D L A+ V+P E PEN E +A+DPLPP GRKV+I+Q+SK ATT+G G L+ WNL FK +ERWSNPLMGWTSTGDPMSN+ L F TPEQAV FC+KRGW YEVK P + E V G Y+HNFLP ++E ++KV T+++ F FPT GASHY RPLNF GT VRQHGNPE Sbjct: 33 KPPDKXKPTPEEEEAKKVAQMRALDVVLEAQNNTVSPPMY----STRDEPFPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTAGGLYGWNLTFKQKERWSNPLMGWTSTGDPMSNMQLSFSTPEQAVKFCQKRGWKYEVKAPAKREAVFGKFAYSHNFLPHNVEHDLKVNGTKTQQFTFPTAGASHYERPLNFVGTAPVRQHGNPE 239
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Match: A0A7S4A6A8_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6A8_9STRA) HSP 1 Score: 176 bits (447), Expect = 6.550e-48 Identity = 92/214 (42.99%), Postives = 128/214 (59.81%), Query Frame = 1 Query: 31 ARTSVRALSSKQPDLPE--MDEETIKKGMDQYLSAKYKNVTPAAI-PQGPQEPSESLPENQVEIMAIDPLPPAQQGRKVVISQRSKAATTSGRYGLHTWNLDFKNQERWSNPLMGWTSTGDPMSNLSLKFDTPEQAVHFCKKRGWDYEVKLPLQSEQVLGATKYAHNFLPMDIEREIKVKKTESKHFAFPTVGASHYLRPLNFHGTGQVRQHGN 663 AR +R S++ P++ + E IK ++ ++A + V P + P GP P E+ A+ +P + R VVISQ+++AATTS + W L +K +ERW+NPLMGWTST DP+SN LKF+T EQA F K GW +EV P++ + G Y+HNFL +E ++KV TE+KHFA P ASHY RPL FHG G+ QHG+ Sbjct: 17 ARPRLRCFSTEDPEMAADLANLERIKAERNRSVTAPHIAVVPDGLAPAGPAHPEEAA--------ALMRIPEIHKKRTVVISQKAQAATTSASHASKAWRLGWKTEERWTNPLMGWTSTADPLSNTELKFETAEQAARFATKMGWAFEVAAPIERNKQYGTNTYSHNFLQKWVETDLKVNGTETKHFARPRPNASHYFRPLKFHGDGECVQHGH 222
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Match: A0A7S2UYX7_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYX7_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.540e-43 Identity = 83/207 (40.10%), Postives = 120/207 (57.97%), Query Frame = 1 Query: 46 RALSSKQPDLPEMDEET-IKKGMDQYLSAKYKNVTPAAIPQGPQEPSESLPENQVEIMAIDPLPPAQQGRKVVISQRSKAATTSGRYGLHTWNLDFKNQERWSNPLMGWTSTGDPMSNLSLKFDTPEQAVHFCKKRGWDYEVKLPLQSEQVLGATKYAHNFLPMDIEREIKVKKTESKHFAFPTVGASHYLRPLNFHGTGQVRQHGN 663 R S P+L E ++E I+ GM + + K VTP + P S LP N E+ + +P Q R VVI Q++K+A TSG G W + +K ERW+NPLMGWTST DPMSNL+L+FD+ ++A +F K GWD+E+ + V G Y+HNFLP E ++ + T++K F +SH+ R L +HG G++ HG+ Sbjct: 33 RFFSQDAPELSEEEKEAQIRAGMKETFAENQKEVTPWMVKDLPYVRSTDLPANPAELATLTGMPQKQSNRTVVIRQKTKSAMTSGLQGTKAWTITWKMGERWTNPLMGWTSTNDPMSNLTLRFDSADEAKNFAIKNGWDFELHETPEVRTVAGNKAYSHNFLPKAFEETLREEGTKNKIFTRDAPNSSHFYRYLKYHGDGEIPFHGH 239
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Match: W7TF31_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF31_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.470e-40 Identity = 75/184 (40.76%), Postives = 110/184 (59.78%), Query Frame = 1 Query: 136 KNVTPAAIPQGPQEPSESLPENQVEIMAIDPLPPAQQGRKVVISQRSKAATTSGRYGLHTWNLDFKNQERWSNPLMGWTSTGDPMSNLSLKFDTPEQAVHFCKKRGWDYEVKLPLQSEQVLGATKYAHNFLPMDIEREIKVKKTESKHFAFPTVGASHYLRPLNFHGTGQVRQHGNPEAAVSEQ 687 K V P + P P+ LP+ + E+ ++ P Q+ RKV I Q+++ A S + W + + +QERWSNPLMGWTST DP+SN L FDT E+A F K++GW ++ + EQVLG KYA NFL D+E ++K + T++K F P AS++ +PL +HG G+ QHG P ++ Sbjct: 67 KKVQPYLVADVPDLPT-YLPQKEEEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKSYPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTKQFTNPGYTASNWFQPLKYHGDGECEQHGPPREGAKKK 249
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Match: A0A7S1FML6_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FML6_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.480e-35 Identity = 78/187 (41.71%), Postives = 110/187 (58.82%), Query Frame = 1 Query: 127 AKYK--NVTPAAIPQGPQEPSES--LPENQVEIMAIDPLPPAQQGRKVVISQRSKAATTSGRYGLHTWNLDFKNQERWSNPLMGWTSTGDPMSNL--SLKFDTPEQAVHFCKKRGWDYEV---KLPLQSEQVLGATKYAHNFLPMDIEREIKVKKTESKHFAFPTVGASHYLRPLNFHGTGQVRQHG 660 A+YK N++P A+P +++ LPEN E +D Q+ R V I Q +K+A TS W +D+ ++E W NPLMG+ S DPM+ + ++FDTPEQAV FCKKRGW YEV +Q+E G T+Y HNF + +++ + + + + GASHY RPLNFHGT +V QHG Sbjct: 64 ARYKAENLSPNAMPWNLAYKNDAAYLPENIAEFAVLDKAHDDQKHRTVTIKQYAKSAMTSNESNARAWYIDWDHEENWENPLMGYVSGADPMNQVLKQMRFDTPEQAVAFCKKRGWTYEVGPADTDVQTE--FGITQYEHNFFSKAAQVDVRTRGRKCELYHRSAAGASHYFRPLNFHGTDKVEQHG 248
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Match: A0A835YZQ1_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ1_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.340e-34 Identity = 77/211 (36.49%), Postives = 120/211 (56.87%), Query Frame = 1 Query: 43 VRALSSKQPDLP--EMDEETIKKGMDQYLSAKYKNVTPAAIPQGPQEPSESLPENQVEIMAIDPLPPAQQGRKVVISQRSKAATTSGRYGLHTWNLDFKN-QERWSNPLMGWTSTGDPMSNLSLKFDTPEQAVHFCKKRGWDY--EVKLPLQSEQVLGATKYAHNFLPMDIEREIKVKKTESKHFAFPTVGASHYLRPLNFHGTGQVRQHG 660 VR LSS P P + D E ++K ++ A+ V P + P P + P+N+ E+ + P + R V ISQ +K++ TS R+ + W++ + + +E +N LMGW +T DP+++L + F+ E+A+ FC+K GW Y E + + G Y++NFLP + ++K+ KT++K F P ASHY RPLNFHGT V QHG Sbjct: 20 VRVLSSNAPATPPPKPDPEVVEKMAEKARKARRLKVVPEHVAALPDLPGRT-PQNKEEVAVLAMQPENHRKRVVTISQNAKSSMTSFRHNVVKWHIRWDDHKELETNALMGWAATSDPLASLDMLFEDKEKAIAFCEKMGWGYTLEESNEYTYDNLYGKKSYSYNFLPEAVLADLKLNKTKTKQFVRPGANASHYFRPLNFHGTAPVEQHG 229
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Match: A0A7S1FL80_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FL80_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.740e-32 Identity = 64/142 (45.07%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 250 RKVVISQRSKAATTSGRYGLHTWNLDFKNQERWSNPLMGWTSTGDPMSNL--SLKFDTPEQAVHFCKKRGWDYEV---KLPLQSEQVLGATKYAHNFLPMDIEREIKVKKTESKHFAFPTVGASHYLRPLNFHGTGQVRQHG 660 R V I Q +K+A TS W +D+ ++E W NPLMG+ S DPM+ + ++FDTPEQAV FCKKRGW YEV +Q+E G T+Y HNF + +++ + + + + GASHY RPLNFHGT +V QHG Sbjct: 9 RTVTIKQYAKSAMTSNESNARAWYIDWDHEENWENPLMGYVSGADPMNQVLKQMRFDTPEQAVAFCKKRGWTYEVGPADTDVQTE--FGITQYEHNFFSKAAQVDVRTRGRKCELYHRSAAGASHYFRPLNFHGTDKVEQHG 148
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Match: A0A7S0Q885_9EUKA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q885_9EUKA) HSP 1 Score: 132 bits (332), Expect = 2.830e-32 Identity = 69/209 (33.01%), Postives = 116/209 (55.50%), Query Frame = 1 Query: 43 VRALSSKQPDLPEMDEETIKK--GMDQYLSAKYKNVTPAAIPQGPQEPSESLPENQVEIMAIDPLPPAQQGRKVVISQRSKAATTSGRYGLHTWNLDFKNQERWSNPLMGWTSTGDPMSNLSLKFDTPEQAVHFCKKRGWDYEVKLPL-QSEQVLGATKYAHNFLPMDIEREIKVKKTESKHFAFPTVGASHYLRPLNFHGTGQVRQHG 660 +RALS+K P PE +E I++ M +++ + G +P+N E+ A+ +P R ++I QR + SG+ H W + +KN+ERW NPLMGW S+ DPM+ + L FD+ E+A+ F ++ GW+YE++ +S + G Y NFL +++K + +++ + P G+S++ PL +HG G+V QHG Sbjct: 1 MRALSTKVPRTPEQVKEGIERVERMKKFMQKSANTDMARGVGSGWDL---HVPKNISEMAALSGMPKEHSSRTILIGQRQLKSVQSGQAYAHQWQITWKNEERWKNPLMGWGSSADPMAQVKLNFDSKEEAIAFAQRNGWEYELQRETSKSNRPAGFNSYKDNFLEKRTVKQLKKEGAKNQIYVNPGYGSSNWFMPLKYHGDGEVLQHG 206
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Match: A0A7S0SXQ8_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXQ8_9STRA) HSP 1 Score: 124 bits (310), Expect = 6.250e-29 Identity = 62/152 (40.79%), Postives = 87/152 (57.24%), Query Frame = 1 Query: 208 EIMAIDPLPPAQQGRKVVISQRSKAATTSGRYGLHTWNLDFKNQERWSNPLMGWTSTGDPMSNLSLKFDTPEQAVHFCKKRGWDYEVKLPLQSEQVL-GATKYAHNFLPMDIEREIKVKKTESKHFAFPTVGASHYLRPLNFHGTGQVRQHG 660 E+ + LP + RKV+I R ++ G H W + + RWSNPLMGWTST D M+N+ L FD E+A+ F ++ W+YEVK P V G KY+ NFLP ++K + +++K FA P G S++ PLN+HGT V Q G Sbjct: 71 ELRILSELPEEEFNRKVLIEPRMVRSSQQGVRIAHQWQITWLPTARWSNPLMGWTSTSDTMANVKLYFDNREEAIAFAERNAWNYEVKAPTTLTIVQPGTNKYSDNFLPKSTILKLKQEGSKNKIFASPGYGKSNFFMPLNYHGTNPVEQFG 222
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Match: K3WM19_GLOUD (Trehalose 6-phosphate phosphatase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM19_GLOUD) HSP 1 Score: 129 bits (324), Expect = 1.450e-28 Identity = 59/139 (42.45%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 247 GRKVVISQRSKAATTSGRYGLHTWNLDFKNQERWSNPLMGWTSTGDPMSNLSLKFDTPEQAVHFCKKRGWDYEVKLPLQSEQVLGATKYAHNFLPMDIEREIKVKKTESK-HFAFPTVGASHYLRPLNFHGTGQVRQHG 660 GRKV I ++ SG Y W + F + W NPLMGWTST DP+ + KFD E AVHF +K+GW+ +++ P+++ + G Y+HNFLP+D+E IK + +S HF PT S++++ L +HG G V QHG Sbjct: 387 GRKVHIFMPTRHQMQSGTYNTRHWEIRFDSPRTWQNPLMGWTSTKDPLHGMVFKFDKKEDAVHFAEKQGWEIDIQEPVETGKFDGQLAYSHNFLPLDVENLIKREGKKSHVHFKHPTGRRSNWVKTLKYHGNGVVAQHG 525 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig97.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig97.7.1 >prot_C-tenellus_contig97.7.1 ID=prot_C-tenellus_contig97.7.1|Name=mRNA_C-tenellus_contig97.7.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=204bp MDEETIKKGMDQYLSAKYKNVTPAAIPQGPQEPSESLPENQVEIMAIDPLback to top mRNA from alignment at C-tenellus_contig97:19860..25325+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig97.7.1 ID=mRNA_C-tenellus_contig97.7.1|Name=mRNA_C-tenellus_contig97.7.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5466bp|location=Sequence derived from alignment at C-tenellus_contig97:19860..25325+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig97:19860..25325+ >mRNA_C-tenellus_contig97.7.1 ID=mRNA_C-tenellus_contig97.7.1|Name=mRNA_C-tenellus_contig97.7.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=612bp|location=Sequence derived from alignment at C-tenellus_contig97:19860..25325+ (Choristocarpus tenellus KU2346)back to top |