mRNA_C-tenellus_contig9698.2.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9698.2.2
Unique NamemRNA_C-tenellus_contig9698.2.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 4.060e-64
Identity = 129/282 (45.74%), Postives = 163/282 (57.80%), Query Frame = 3
Query:  237 RSKLLPTSCLKR---CGVRRSNWRCLGDQASPPPPTMPSTSRLMRIS--RLYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTV 1067
            R +   TS L R   CG   +        A PPP   P  ++  R S   +Y SLLESRPL TKA+TS AIA AGDV+CQ+L   V        +  +V  DD +  +  G     DG    V+                          +IDWGR  RF+F+GAA+VAPALH WY  L++R+PGT   +V KR+A+DQ +F+P  +  F S+VMLLDG  AKI  KLR D+  T+VSNWGYW+PAQV+NFR V P+YQVLYAN +GFFWNI+LS QS K V
Sbjct:   22 RHRATTTSALPRRQCCGGSGTRSASTKVPAQPPPTGAPKPTKPTRASIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEHSSAQHV--DDHEQHEPFG-----DGGATSVAS-------------------------EIDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAV 271          
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 2.810e-62
Identity = 115/232 (49.57%), Postives = 146/232 (62.93%), Query Frame = 3
Query:  372 LYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTV 1067
            +Y SLLESRPL TKA+TS AIA AGDV+CQ+L   V        +  +V  D+ ++ +  G     DG    V+                          +IDWGR  RF+F+GAA+VAPALH WY  L++R+PGT   +V KR+A+DQ +F+P  +  F S+VMLLDG  AKI  KLR D+  TLVSNWGYW+PAQV+NFR V P+YQVLYAN +GFFWNI+LS QS K V
Sbjct:    1 MYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEKSSAQDV--DELEHHEPFG-----DGGARSVAS-------------------------EIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAV 200          
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A835YNC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC4_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.840e-52
Identity = 110/249 (44.18%), Postives = 138/249 (55.42%), Query Frame = 3
Query:  348 SRLMRISRLYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTVDTKSHALGE 1094
            SR + I + Y+ LLE+ P+ TKALTSAAIA  GD+ CQI              Y N           RG      G G   S      G       S +R         +DW RCARF  L  AL APA H WY LL + +PG       KR+A+DQF+FSP  +  FFS++M+L+G+ A+IPDKLR+D+W TLVSNW  WMPAQ+ NFRLVP  YQV  AN +G FWN +LS QSFK + +   +  E
Sbjct:   42 SRSINIIQSYSRLLETNPIATKALTSAAIAGMGDIGCQI--------------YTN-----------RGLAAAAAGAGEAGSNAGAADGAATWGSTSQQR--------HLDWTRCARFMLLSGALFAPAAHAWYGLLGRLLPGQTLMVATKRMALDQFVFSPVFVGVFFSALMVLEGEAARIPDKLRQDYWTTLVSNWTLWMPAQLANFRLVPLQYQVGAANCVGLFWNAYLSFQSFKKIKSAPQSQPE 257          
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A835YKC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC9_9STRA)

HSP 1 Score: 184 bits (466), Expect = 7.930e-50
Identity = 105/250 (42.00%), Postives = 142/250 (56.80%), Query Frame = 3
Query:  375 YTSLLESRPLLTKALTSAAIACAGDVTCQIL---EAWVLHDRG-------HPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVA-KRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFK-TVDTKSHAL 1088
            Y++LL SRPLLTK +T+A IA  GDV CQ+     AW    +G       HP  +  V    +  A + G                            AKR +       +D  R  +F  L AAL AP+ HYWY +L K + G  A   A KR+A+DQF+F+P  M  FFS++M+++G+ AKIP KL++D+WPTLV NWG WMPAQ++NFRLVP  YQVL+AN +GFFWN  +S+Q FK T+D +   +
Sbjct:   28 YSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGM---------------------------AKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPV 250          
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: F0WBY7_9STRA (Uncharacterized protein AlNc14C54G4174 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBY7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.640e-39
Identity = 91/259 (35.14%), Postives = 127/259 (49.03%), Query Frame = 3
Query:  333 TMPSTSRLMRISRLYTSLLESRPLLTKALTSAAIACAGDVTCQI-LEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTVDTKSHALGEAKHE 1106
            T  S S    +   Y   L+ RP LTK LT+ AIA  GD+ CQI LE  ++ D G                                         EKQ++A    G        IDW R A FSFL   ++ P LH WY  L +   G    ++AKRL +DQF+F+P+ +  FF+ ++ L+G+  K+  KL +++WPT+ +NW  W+PAQ++NF  VP   QVL+ANV+G FWN +LS  S        H    A+HE
Sbjct:   68 TSKSKSFFRSLWTAYEQALQQRPYLTKTLTATAIAATGDIVCQIALEKGLVDDLGALS--------------------------------------EKQQLAMQGDGN----KIMIDWKRLAIFSFLTGVVMTPILHQWYLFLARNFAGAGKQAIAKRLIMDQFLFAPSFLPVFFTMLLTLEGRFDKVSSKLHQEWWPTIKTNWIVWIPAQLINFGFVPGNLQVLFANVIGLFWNAYLSYVS--------HGSPHAEHE 276          
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A024G821_9STRA (Uncharacterized protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G821_9STRA)

HSP 1 Score: 151 bits (382), Expect = 2.600e-38
Identity = 87/238 (36.55%), Postives = 130/238 (54.62%), Query Frame = 3
Query:  333 TMPSTSRLMRISRLYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLS 1046
            T+ S S    +   Y   L+ RP LTK +T+  IA  GD+ CQI                         A ++G +G  D N ++          EKQ++A   +G+ S  +  IDW R A FSFL   ++ P LH+WY  L +   G    ++AKRL +DQF+F+P+ +  FF+ ++ L+GK  K+  KL +++WPT+ +NW  W+PAQ++NF  VP   QVL+ANV+G FWN +LS
Sbjct:   68 TIKSKSFFRSLWMAYEQALQHRPYLTKTITATTIAATGDIICQI-------------------------ALEKGLVG--DLNALN----------EKQKLAV--QGDASKIV--IDWKRLAIFSFLTGVVMTPILHHWYLFLSRNFAGAGKQAIAKRLILDQFLFAPSFLPIFFTMLLTLEGKFDKVASKLHQEWWPTIKTNWIVWIPAQLINFGFVPGNLQVLFANVVGLFWNAYLS 264          
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A4Q2YFM0_9BACT (Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFM0_9BACT)

HSP 1 Score: 144 bits (363), Expect = 2.610e-36
Identity = 85/254 (33.46%), Postives = 128/254 (50.39%), Query Frame = 3
Query:  339 PSTSRLMRISRLYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTVDTKSHALGEAK 1100
            P TS L +    Y  LLE+ PL+TK +T+ AIA   DVTCQ+                              +  +ED N                             L ++DW R   F+ +   L  P  HYWY  L  +I GT   +  KR+ +DQ +F+P L+ +FFS+V+L++G+  +IPDKLR D   T+++N+  W+PAQ++NF+ VP  Y+VL+AN +GFFWNI+LS   +  V+  S + G+ +
Sbjct:   26 PDTSSLWQ---QYNKLLETHPLMTKCITAGAIAAVADVTCQV-----------------------------SFPSDEDAN--------------------------KSLLERMDWKRTRNFTIVNTFLFPPLAHYWYGFLSVKIVGTTFMAAIKRVVLDQMLFAPVLLASFFSAVLLVNGESDRIPDKLRNDLPTTILTNYTVWIPAQLINFQFVPIPYRVLWANAVGFFWNIYLS---YAAVNGTSSSAGDTE 218          
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A0P1ASJ6_PLAHL (Peroxisomal membrane mpv17 pmp22-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASJ6_PLAHL)

HSP 1 Score: 144 bits (364), Expect = 2.770e-36
Identity = 87/247 (35.22%), Postives = 116/247 (46.96%), Query Frame = 3
Query:  375 YTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSF-----KTVDTKSHALGEAK 1100
            Y SLLE+ P+ TK +T   IA  GDV CQ+   ++  D GH                                                          ++D  R A F+FLG  +++P LH WY  L  R+PG    ++ KRLA+DQ  F+P  +  F SSV+ L+G    IPDKLR D+WP   +NW  W+PAQ+ NFR VP   QVL++NV+G FWN +LS  S      K V+ K    GE K
Sbjct:   45 YASLLETHPISTKIVTGGTIAGLGDVGCQL---FLESDDGHA---------------------------------------------------------KLDIKRTAIFTFLGGVVISPILHVWYRFLGSRLPGVSTAAITKRLALDQLGFAPTFLPIFLSSVLTLEGHAEDIPDKLRSDWWPITKTNWVVWVPAQLFNFRFVPGSLQVLFSNVMGLFWNAYLSYMSHSKVVKKLVEEKDMNEGENK 231          
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: K3X8F5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8F5_GLOUD)

HSP 1 Score: 144 bits (362), Expect = 5.940e-36
Identity = 77/224 (34.38%), Postives = 114/224 (50.89%), Query Frame = 3
Query:  375 YTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLS 1046
            Y +LL++ P+ TK +T +AIA  GD+ CQ+           P T  +VK                                                       R   F+FLG  +++P LH WY  L +  PGT   ++AKRLA+DQF F+P  +  FF+ ++ L+G V K+P+KL++D+WP + +NWG W+PAQ++NFR VP   QVL++NV+G FWN +LS
Sbjct:   47 YNTLLQTHPVSTKLVTGSAIAAIGDINCQMFL--------EPDTRFSVK-------------------------------------------------------RVVIFTFLGGVVISPILHVWYGFLGRVAPGTANATIAKRLALDQFGFAPTFLPIFFTMLLTLEGNVDKVPEKLKKDWWPAVKANWGLWVPAQLINFRFVPGSLQVLFSNVVGLFWNSYLS 207          
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A0L0G5N4_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5N4_9EUKA)

HSP 1 Score: 141 bits (355), Expect = 4.090e-35
Identity = 81/231 (35.06%), Postives = 112/231 (48.48%), Query Frame = 3
Query:  363 ISRLYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQS 1055
            + + Y   LE+ PL TKAL+S  IA  GD+ CQ                                                 +G E + M SA  G       +  W R   FS LG   + PALH WY +L + +PGT   +VAKRLA DQF+F+P  + +F S  ++L GK+A +P KL   +WPT+ +NW  W+PAQ +NF  V P  QVL+AN +G  W+++LS  S
Sbjct:   39 LGQTYMRWLETYPLKTKALSSGVIAGLGDILCQ-------------------------------------------------VGFENKSMFSAGDGNKGS---EFGWRRFFVFSALGGLYLGPALHMWYRVLGRVLPGTTQLAVAKRLAADQFVFAPVFIPSFMSLTLILQGKIADVPKKLADAWWPTVKANWAVWIPAQYINFSFVSPNLQVLFANCVGLVWHVYLSKVS 217          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL95_9PHAE4.060e-6445.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTH2_ECTSI2.810e-6249.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNC4_9STRA1.840e-5244.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKC9_9STRA7.930e-5042.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0WBY7_9STRA3.640e-3935.14Uncharacterized protein AlNc14C54G4174 n=1 Tax=Alb... [more]
A0A024G821_9STRA2.600e-3836.55Uncharacterized protein n=3 Tax=Albugo candida Tax... [more]
A0A4Q2YFM0_9BACT2.610e-3633.46Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobia... [more]
A0A0P1ASJ6_PLAHL2.770e-3635.22Peroxisomal membrane mpv17 pmp22-like protein n=1 ... [more]
K3X8F5_GLOUD5.940e-3634.38Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0L0G5N4_9EUKA4.090e-3535.06Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9698contigC-tenellus_contig9698:1217..3598 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTH2
PFAMsMpv17_PMP22
Model size1623
Max annot lvl2759|Eukaryota
KEGG koko:K01301,ko:K13347,ko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
Exons3
Evalue4.48e-65
EggNOG OGsKOG1944@1|root,KOG1944@2759|Eukaryota
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-02_005610.1
EC3.4.17.21
DescriptionBelongs to the peroxisomal membrane protein PXMP2 4 family
Cds size1095
COG categoryC
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790196.5278566-UTR-C-tenellus_contig9698:1216..17271680790196.5278566-UTR-C-tenellus_contig9698:1216..1727Choristocarpus tenellus KU2346UTRC-tenellus_contig9698 1217..1727 -
1680790196.5717309-UTR-C-tenellus_contig9698:3581..35981680790196.5717309-UTR-C-tenellus_contig9698:3581..3598Choristocarpus tenellus KU2346UTRC-tenellus_contig9698 3582..3598 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790196.541668-CDS-C-tenellus_contig9698:1727..18411680790196.541668-CDS-C-tenellus_contig9698:1727..1841Choristocarpus tenellus KU2346CDSC-tenellus_contig9698 1728..1841 -
1680790196.5520627-CDS-C-tenellus_contig9698:2298..24061680790196.5520627-CDS-C-tenellus_contig9698:2298..2406Choristocarpus tenellus KU2346CDSC-tenellus_contig9698 2299..2406 -
1680790196.5617702-CDS-C-tenellus_contig9698:2708..35811680790196.5617702-CDS-C-tenellus_contig9698:2708..3581Choristocarpus tenellus KU2346CDSC-tenellus_contig9698 2709..3581 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9698.2.2prot_C-tenellus_contig9698.2.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9698 1728..3581 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9698.2.2

>prot_C-tenellus_contig9698.2.2 ID=prot_C-tenellus_contig9698.2.2|Name=mRNA_C-tenellus_contig9698.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=365bp
MVGGHIAYLEVCRSFDKPVVSLLYCPKFKCNDGLGGLQNMHRVTKASNDH
EVPLETRIPFTLTFFLFIAGSAWRSKLLPTSCLKRCGVRRSNWRCLGDQA
SPPPPTMPSTSRLMRISRLYTSLLESRPLLTKALTSAAIACAGDVTCQIL
EAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGI
EKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKR
IPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDF
WPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTV
DTKSHALGEAKHES*
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mRNA from alignment at C-tenellus_contig9698:1217..3598-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9698.2.2 ID=mRNA_C-tenellus_contig9698.2.2|Name=mRNA_C-tenellus_contig9698.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2382bp|location=Sequence derived from alignment at C-tenellus_contig9698:1217..3598- (Choristocarpus tenellus KU2346)
AACCTATATGCTTGTCTATGGTAGGAGGGCATATTGCCTATCTCGAGGTA TGTAGGTCGTTTGATAAACCCGTGGTATCCCTTCTTTATTGTCCTAAATT CAAATGCAACGATGGTTTGGGAGGATTGCAAAACATGCATCGAGTAACGA AGGCGTCGAATGACCATGAGGTTCCTCTCGAGACTCGAATCCCTTTCACT CTTACCTTTTTCCTATTTATAGCAGGGTCTGCGTGGAGAAGTAAACTGTT GCCCACATCTTGCCTGAAACGATGCGGGGTAAGGAGAAGTAATTGGAGAT GCCTTGGTGACCAAGCCTCGCCCCCTCCTCCGACCATGCCTTCTACGAGT CGCCTGATGCGCATATCAAGACTCTATACATCCCTCTTGGAGTCTAGACC ACTGTTAACGAAAGCACTTACGTCAGCTGCGATTGCTTGCGCTGGAGACG TCACTTGCCAGATCCTAGAGGCTTGGGTACTTCATGATAGAGGACACCCA GGCACCTATGACAATGTTAAAATTGATGACAGCAAATACGCAGATCAGAG AGGGTGGATAGGGAACGAAGATGGCAATGGAATTGATGTCTCTGAAGGTG ATGGAATTATTGGAATCGAAAAACAGAGGATGGCCTCAGCGAAAAGGGGT GAGTTTTCGTTGGCACTATTTCAGATAGACTGGGGACGTTGCGCAAGGTT CTCCTTTCTTGGAGCGGCCTTGGTCGCCCCCGCCCTACATTACTGGTACG CATTGCTGGTGAAAAGGATTCCGGGCACACTTGCTCCCAGCGTGGCCAAA CGTTTGGCCGTGGATCAGTTCATTTTCTCACCTGCTCTAATGGTGGCGTT CTTCTCAAGTGTCATGCTACTTGACGGCAAGGTGGCAAAGGTTAGAGATG AATGAGGGCCTCGACGATTCCAGGTTGTATTTGATTTTAGAGTTGGAACT GTGTTGTTTGCGGGCACCCTTGCTTTTTCGCAAAGGGAAAACTAATCCTC TGCTTATATTTGTCAACTTACTGCAGAATCCATCTCCCTTCTCCCTTTCC CCCATCATCTCTCCCTTTCCTGCTCCCAGATTTGAAGTAGTCACTCACTC TCACCCACCCCTTTGTCCCCTCGATTGAAACAATTGGATTACCTTGCTAC ACATCTGCGTATGGGCTTTTACAATGCCTTACTGACCTTCAGATTCCTGA CAAGCTGAGGCGTGACTTTTGGCCCACTCTTGTAAGCAATTGGGGCTACT GGATGCCTGCTCAAGTGGTGAACTTCAGGCTTGTGCCTCCAATGTATCAG GTAGGGGAGGGTGACCTTGTGGCGTTTTAGTTTGCGATAGTGGAAAATAG GAAAATTAGCATTTGGCTGTTCAGATAAAATTAAAAGCATATGAATGCCA TGGTATGGTTTCACATATGAGAGAAGAATGCACACTATTGTGTATGATTG AAAGGAGGGTTTGCTTTGAAGTATATTGCTTTGAGCTGGCATTAGAGAGC ACTTTAATGAGAATAGTCTTCCAATGTACATAACATGGGTATGACATGGC AGGAGGGTCGTGAAGTTCTTAGTGACAGGCAAGTGTAATGAGAGTGGTTG TGTTGCTTGTTATTCTTAAGTCATGTCATTTTCAAGGCTTGAGATTAATT GAACTGGATTCAGGGATTTCTGAACCCCTAGTATCTCTCACGCTCTTTGC CTAGAAATTACCCTCCACCCTTTCCTCCCCCTTCCACCCTTTCCTATGCT TGTATAGGTTCTCTACGCAAATGTATTGGGATTCTTTTGGAATATTTTCC TCTCCTCACAGTCCTTTAAGACAGTGGATACAAAATCGCATGCACTAGGG GAAGCAAAGCATGAGAGTTGAAGGGAGGATCTTGGAGGACCCAAGAGTTG AGGTCCATCACGAATACGCACACTGCCGATGCAGGTTACCAGGTGCTTTA GAAGGATGAGCAGTTGGCTGACATTCCATACTACTGTTCCCTGTCCTCTG TCTGAGGTCAGCTGCTCAAGCTTGGAAGGAGAAGTGTAACTTGATGTTGG CACAGATGGGAGCATTGGCTGTCACACTGGGGCTCATGGAGCTTTCCTCA TCAGGAGCGTATGAAAAGGGGTCTTGAAAAGTTCAGTCCTTCATGGAGGC AATGTTGTAAATATCACAGGTGCTGCAAGTTTGGCACAGCTATGTGTGTG TCTTAAAACCATGGTGAAAGTGAAAATTGACCCTGTTTAATGTGAGCAAT GTGCAGTACATTGACACAAAGACTACACCCCTCATCATTGGTAGTATTTG CAAGGATATCCATTCTGGGATGATAACTTGAATCTTACATCCCAAGTTCA CGAGACTCTACAAGCATAGAAGTACAGGATGG
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Coding sequence (CDS) from alignment at C-tenellus_contig9698:1217..3598-

>mRNA_C-tenellus_contig9698.2.2 ID=mRNA_C-tenellus_contig9698.2.2|Name=mRNA_C-tenellus_contig9698.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1095bp|location=Sequence derived from alignment at C-tenellus_contig9698:1217..3598- (Choristocarpus tenellus KU2346)
ATGGTAGGAGGGCATATTGCCTATCTCGAGGTATGTAGGTCGTTTGATAA
ACCCGTGGTATCCCTTCTTTATTGTCCTAAATTCAAATGCAACGATGGTT
TGGGAGGATTGCAAAACATGCATCGAGTAACGAAGGCGTCGAATGACCAT
GAGGTTCCTCTCGAGACTCGAATCCCTTTCACTCTTACCTTTTTCCTATT
TATAGCAGGGTCTGCGTGGAGAAGTAAACTGTTGCCCACATCTTGCCTGA
AACGATGCGGGGTAAGGAGAAGTAATTGGAGATGCCTTGGTGACCAAGCC
TCGCCCCCTCCTCCGACCATGCCTTCTACGAGTCGCCTGATGCGCATATC
AAGACTCTATACATCCCTCTTGGAGTCTAGACCACTGTTAACGAAAGCAC
TTACGTCAGCTGCGATTGCTTGCGCTGGAGACGTCACTTGCCAGATCCTA
GAGGCTTGGGTACTTCATGATAGAGGACACCCAGGCACCTATGACAATGT
TAAAATTGATGACAGCAAATACGCAGATCAGAGAGGGTGGATAGGGAACG
AAGATGGCAATGGAATTGATGTCTCTGAAGGTGATGGAATTATTGGAATC
GAAAAACAGAGGATGGCCTCAGCGAAAAGGGGTGAGTTTTCGTTGGCACT
ATTTCAGATAGACTGGGGACGTTGCGCAAGGTTCTCCTTTCTTGGAGCGG
CCTTGGTCGCCCCCGCCCTACATTACTGGTACGCATTGCTGGTGAAAAGG
ATTCCGGGCACACTTGCTCCCAGCGTGGCCAAACGTTTGGCCGTGGATCA
GTTCATTTTCTCACCTGCTCTAATGGTGGCGTTCTTCTCAAGTGTCATGC
TACTTGACGGCAAGGTGGCAAAGATTCCTGACAAGCTGAGGCGTGACTTT
TGGCCCACTCTTGTAAGCAATTGGGGCTACTGGATGCCTGCTCAAGTGGT
GAACTTCAGGCTTGTGCCTCCAATGTATCAGGTTCTCTACGCAAATGTAT
TGGGATTCTTTTGGAATATTTTCCTCTCCTCACAGTCCTTTAAGACAGTG
GATACAAAATCGCATGCACTAGGGGAAGCAAAGCATGAGAGTTGA
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