mRNA_C-tenellus_contig9698.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE) HSP 1 Score: 220 bits (560), Expect = 4.060e-64 Identity = 129/282 (45.74%), Postives = 163/282 (57.80%), Query Frame = 3 Query: 237 RSKLLPTSCLKR---CGVRRSNWRCLGDQASPPPPTMPSTSRLMRIS--RLYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTV 1067 R + TS L R CG + A PPP P ++ R S +Y SLLESRPL TKA+TS AIA AGDV+CQ+L V + +V DD + + G DG V+ +IDWGR RF+F+GAA+VAPALH WY L++R+PGT +V KR+A+DQ +F+P + F S+VMLLDG AKI KLR D+ T+VSNWGYW+PAQV+NFR V P+YQVLYAN +GFFWNI+LS QS K V Sbjct: 22 RHRATTTSALPRRQCCGGSGTRSASTKVPAQPPPTGAPKPTKPTRASIFSMYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEHSSAQHV--DDHEQHEPFG-----DGGATSVAS-------------------------EIDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAV 271
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI) HSP 1 Score: 213 bits (541), Expect = 2.810e-62 Identity = 115/232 (49.57%), Postives = 146/232 (62.93%), Query Frame = 3 Query: 372 LYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTV 1067 +Y SLLESRPL TKA+TS AIA AGDV+CQ+L V + +V D+ ++ + G DG V+ +IDWGR RF+F+GAA+VAPALH WY L++R+PGT +V KR+A+DQ +F+P + F S+VMLLDG AKI KLR D+ TLVSNWGYW+PAQV+NFR V P+YQVLYAN +GFFWNI+LS QS K V Sbjct: 1 MYNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEKSSAQDV--DELEHHEPFG-----DGGARSVAS-------------------------EIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKAV 200
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A835YNC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC4_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.840e-52 Identity = 110/249 (44.18%), Postives = 138/249 (55.42%), Query Frame = 3 Query: 348 SRLMRISRLYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTVDTKSHALGE 1094 SR + I + Y+ LLE+ P+ TKALTSAAIA GD+ CQI Y N RG G G S G S +R +DW RCARF L AL APA H WY LL + +PG KR+A+DQF+FSP + FFS++M+L+G+ A+IPDKLR+D+W TLVSNW WMPAQ+ NFRLVP YQV AN +G FWN +LS QSFK + + + E Sbjct: 42 SRSINIIQSYSRLLETNPIATKALTSAAIAGMGDIGCQI--------------YTN-----------RGLAAAAAGAGEAGSNAGAADGAATWGSTSQQR--------HLDWTRCARFMLLSGALFAPAAHAWYGLLGRLLPGQTLMVATKRMALDQFVFSPVFVGVFFSALMVLEGEAARIPDKLRQDYWTTLVSNWTLWMPAQLANFRLVPLQYQVGAANCVGLFWNAYLSFQSFKKIKSAPQSQPE 257
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A835YKC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC9_9STRA) HSP 1 Score: 184 bits (466), Expect = 7.930e-50 Identity = 105/250 (42.00%), Postives = 142/250 (56.80%), Query Frame = 3 Query: 375 YTSLLESRPLLTKALTSAAIACAGDVTCQIL---EAWVLHDRG-------HPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVA-KRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFK-TVDTKSHAL 1088 Y++LL SRPLLTK +T+A IA GDV CQ+ AW +G HP + V + A + G AKR + +D R +F L AAL AP+ HYWY +L K + G A A KR+A+DQF+F+P M FFS++M+++G+ AKIP KL++D+WPTLV NWG WMPAQ++NFRLVP YQVL+AN +GFFWN +S+Q FK T+D + + Sbjct: 28 YSALLASRPLLTKGVTAAIIAGMGDVACQLYTAHRAWEEEAQGENDVPPHHPHIHGGVASVSAPAAAEAGM---------------------------AKRQQHRDWWGAVDLKRTGKFMLLNAALFAPSAHYWYQVLAKYVKGPTAMGAAVKRMALDQFLFAPVFMGLFFSALMVVEGEAAKIPQKLKQDYWPTLVKNWGIWMPAQLINFRLVPQPYQVLWANGVGFFWNAIMSAQCFKETLDDEEQPV 250
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: F0WBY7_9STRA (Uncharacterized protein AlNc14C54G4174 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBY7_9STRA) HSP 1 Score: 154 bits (388), Expect = 3.640e-39 Identity = 91/259 (35.14%), Postives = 127/259 (49.03%), Query Frame = 3 Query: 333 TMPSTSRLMRISRLYTSLLESRPLLTKALTSAAIACAGDVTCQI-LEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTVDTKSHALGEAKHE 1106 T S S + Y L+ RP LTK LT+ AIA GD+ CQI LE ++ D G EKQ++A G IDW R A FSFL ++ P LH WY L + G ++AKRL +DQF+F+P+ + FF+ ++ L+G+ K+ KL +++WPT+ +NW W+PAQ++NF VP QVL+ANV+G FWN +LS S H A+HE Sbjct: 68 TSKSKSFFRSLWTAYEQALQQRPYLTKTLTATAIAATGDIVCQIALEKGLVDDLGALS--------------------------------------EKQQLAMQGDGN----KIMIDWKRLAIFSFLTGVVMTPILHQWYLFLARNFAGAGKQAIAKRLIMDQFLFAPSFLPVFFTMLLTLEGRFDKVSSKLHQEWWPTIKTNWIVWIPAQLINFGFVPGNLQVLFANVIGLFWNAYLSYVS--------HGSPHAEHE 276
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A024G821_9STRA (Uncharacterized protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G821_9STRA) HSP 1 Score: 151 bits (382), Expect = 2.600e-38 Identity = 87/238 (36.55%), Postives = 130/238 (54.62%), Query Frame = 3 Query: 333 TMPSTSRLMRISRLYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLS 1046 T+ S S + Y L+ RP LTK +T+ IA GD+ CQI A ++G +G D N ++ EKQ++A +G+ S + IDW R A FSFL ++ P LH+WY L + G ++AKRL +DQF+F+P+ + FF+ ++ L+GK K+ KL +++WPT+ +NW W+PAQ++NF VP QVL+ANV+G FWN +LS Sbjct: 68 TIKSKSFFRSLWMAYEQALQHRPYLTKTITATTIAATGDIICQI-------------------------ALEKGLVG--DLNALN----------EKQKLAV--QGDASKIV--IDWKRLAIFSFLTGVVMTPILHHWYLFLSRNFAGAGKQAIAKRLILDQFLFAPSFLPIFFTMLLTLEGKFDKVASKLHQEWWPTIKTNWIVWIPAQLINFGFVPGNLQVLFANVVGLFWNAYLS 264
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A4Q2YFM0_9BACT (Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFM0_9BACT) HSP 1 Score: 144 bits (363), Expect = 2.610e-36 Identity = 85/254 (33.46%), Postives = 128/254 (50.39%), Query Frame = 3 Query: 339 PSTSRLMRISRLYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSFKTVDTKSHALGEAK 1100 P TS L + Y LLE+ PL+TK +T+ AIA DVTCQ+ + +ED N L ++DW R F+ + L P HYWY L +I GT + KR+ +DQ +F+P L+ +FFS+V+L++G+ +IPDKLR D T+++N+ W+PAQ++NF+ VP Y+VL+AN +GFFWNI+LS + V+ S + G+ + Sbjct: 26 PDTSSLWQ---QYNKLLETHPLMTKCITAGAIAAVADVTCQV-----------------------------SFPSDEDAN--------------------------KSLLERMDWKRTRNFTIVNTFLFPPLAHYWYGFLSVKIVGTTFMAAIKRVVLDQMLFAPVLLASFFSAVLLVNGESDRIPDKLRNDLPTTILTNYTVWIPAQLINFQFVPIPYRVLWANAVGFFWNIYLS---YAAVNGTSSSAGDTE 218
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A0P1ASJ6_PLAHL (Peroxisomal membrane mpv17 pmp22-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASJ6_PLAHL) HSP 1 Score: 144 bits (364), Expect = 2.770e-36 Identity = 87/247 (35.22%), Postives = 116/247 (46.96%), Query Frame = 3 Query: 375 YTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQSF-----KTVDTKSHALGEAK 1100 Y SLLE+ P+ TK +T IA GDV CQ+ ++ D GH ++D R A F+FLG +++P LH WY L R+PG ++ KRLA+DQ F+P + F SSV+ L+G IPDKLR D+WP +NW W+PAQ+ NFR VP QVL++NV+G FWN +LS S K V+ K GE K Sbjct: 45 YASLLETHPISTKIVTGGTIAGLGDVGCQL---FLESDDGHA---------------------------------------------------------KLDIKRTAIFTFLGGVVISPILHVWYRFLGSRLPGVSTAAITKRLALDQLGFAPTFLPIFLSSVLTLEGHAEDIPDKLRSDWWPITKTNWVVWVPAQLFNFRFVPGSLQVLFSNVMGLFWNAYLSYMSHSKVVKKLVEEKDMNEGENK 231
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: K3X8F5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8F5_GLOUD) HSP 1 Score: 144 bits (362), Expect = 5.940e-36 Identity = 77/224 (34.38%), Postives = 114/224 (50.89%), Query Frame = 3 Query: 375 YTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLS 1046 Y +LL++ P+ TK +T +AIA GD+ CQ+ P T +VK R F+FLG +++P LH WY L + PGT ++AKRLA+DQF F+P + FF+ ++ L+G V K+P+KL++D+WP + +NWG W+PAQ++NFR VP QVL++NV+G FWN +LS Sbjct: 47 YNTLLQTHPVSTKLVTGSAIAAIGDINCQMFL--------EPDTRFSVK-------------------------------------------------------RVVIFTFLGGVVISPILHVWYGFLGRVAPGTANATIAKRLALDQFGFAPTFLPIFFTMLLTLEGNVDKVPEKLKKDWWPAVKANWGLWVPAQLINFRFVPGSLQVLFSNVVGLFWNSYLS 207
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Match: A0A0L0G5N4_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5N4_9EUKA) HSP 1 Score: 141 bits (355), Expect = 4.090e-35 Identity = 81/231 (35.06%), Postives = 112/231 (48.48%), Query Frame = 3 Query: 363 ISRLYTSLLESRPLLTKALTSAAIACAGDVTCQILEAWVLHDRGHPGTYDNVKIDDSKYADQRGWIGNEDGNGIDVSEGDGIIGIEKQRMASAKRGEFSLALFQIDWGRCARFSFLGAALVAPALHYWYALLVKRIPGTLAPSVAKRLAVDQFIFSPALMVAFFSSVMLLDGKVAKIPDKLRRDFWPTLVSNWGYWMPAQVVNFRLVPPMYQVLYANVLGFFWNIFLSSQS 1055 + + Y LE+ PL TKAL+S IA GD+ CQ +G E + M SA G + W R FS LG + PALH WY +L + +PGT +VAKRLA DQF+F+P + +F S ++L GK+A +P KL +WPT+ +NW W+PAQ +NF V P QVL+AN +G W+++LS S Sbjct: 39 LGQTYMRWLETYPLKTKALSSGVIAGLGDILCQ-------------------------------------------------VGFENKSMFSAGDGNKGS---EFGWRRFFVFSALGGLYLGPALHMWYRVLGRVLPGTTQLAVAKRLAADQFVFAPVFIPSFMSLTLILQGKIADVPKKLADAWWPTVKANWAVWIPAQYINFSFVSPNLQVLFANCVGLVWHVYLSKVS 217 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9698.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9698.2.2 >prot_C-tenellus_contig9698.2.2 ID=prot_C-tenellus_contig9698.2.2|Name=mRNA_C-tenellus_contig9698.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=365bp MVGGHIAYLEVCRSFDKPVVSLLYCPKFKCNDGLGGLQNMHRVTKASNDHback to top mRNA from alignment at C-tenellus_contig9698:1217..3598- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9698.2.2 ID=mRNA_C-tenellus_contig9698.2.2|Name=mRNA_C-tenellus_contig9698.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2382bp|location=Sequence derived from alignment at C-tenellus_contig9698:1217..3598- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9698:1217..3598- >mRNA_C-tenellus_contig9698.2.2 ID=mRNA_C-tenellus_contig9698.2.2|Name=mRNA_C-tenellus_contig9698.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1095bp|location=Sequence derived from alignment at C-tenellus_contig9698:1217..3598- (Choristocarpus tenellus KU2346)back to top |