mRNA_C-tenellus_contig9689.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9689.1.1
Unique NamemRNA_C-tenellus_contig9689.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Match: D7FVE7_ECTSI (Glutamate synthase (NADH/NADPH-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVE7_ECTSI)

HSP 1 Score: 741 bits (1914), Expect = 1.350e-266
Identity = 344/392 (87.76%), Postives = 366/392 (93.37%), Query Frame = 1
Query:   64 ASQRRHVAAGGNHEIWREQSDTTDNTPKVKRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEINADGHNAVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIPTRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGATKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWDQGFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQWPKVFGVDYGHGEV 1239
            A Q+R  A G NHEIWR+QSDTTDNTPKVKRRDGTF  IDKTRGFIDY+RNPDPYRDP+ERVFDW EIN   H+ VERTVQAARCMDCGTPFCQTHTGCP++NLIPEWNELVFKGAWRDAI+NLHKTNNFPEFTGRVCPAPCEGACVAGLIDSP+TIK+IEYSIIERAF+EGWV PRIPT RTGMNVAVVGSGPAGLA AD LNQ GHKVTVYER DRVGGLLMYGIPNMKLDKDTV+RR+DLLAEEGIEFVTGANIGVD+DVNDVRA+ DALVLTVG+TKPRDLPVPGR+LKG+HFAMEFLTKNQKRLLMTGDGKLE NWD GFI+AEGKDVIVIGGGDTGTDCIGTSMRHRCRSM NFELLP+PP  RA  NPWPQWPK+FG+DYGHGEV
Sbjct:   23 AQQQRCFAVGQNHEIWRDQSDTTDNTPKVKRRDGTFGNIDKTRGFIDYYRNPDPYRDPLERVFDWGEINDASHDEVERTVQAARCMDCGTPFCQTHTGCPIHNLIPEWNELVFKGAWRDAIENLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPVTIKSIEYSIIERAFEEGWVVPRIPTHRTGMNVAVVGSGPAGLAAADQLNQMGHKVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRIDLLAEEGIEFVTGANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRELKGVHFAMEFLTKNQKRLLMTGDGKLESNWDGGFISAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPQPPDSRAPGNPWPQWPKIFGIDYGHGEV 414          
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Match: A0A836CI68_9STRA (Glutamate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI68_9STRA)

HSP 1 Score: 728 bits (1879), Expect = 2.750e-261
Identity = 342/397 (86.15%), Postives = 367/397 (92.44%), Query Frame = 1
Query:   52 RSHVASQRRHVA-AGGNHEIWREQSDTTDNTPKVKRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEINADGHNAVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIPTRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGATKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWDQGFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQWPKVFGVDYGHGEV 1239
            R   A+Q+R VA AG  HEIWR+++D  DN PKVKRRDG+FAEIDKTRGFIDY+RN DPYRDP+ERVFDW EIN+ GH+ VER+VQAARCMDCGTPFCQTHTGCP++NLIPEWN+LVFKGAWRDAID LHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERA++EGWVTPRIP  RTGMNVAVVGSGPAGLA ADCLNQ+GHKVTVYER DR+GGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVT ANIG DIDVND+RAANDALVLTVG+TKPRDLPVPGR+LKGIHFAMEFLTKNQKRLLMT DG L+ NWD GF+TAEGKDVIVIGGGDTGTDCIGTSMRHRCRS+ NFELLP+PP  RA  NPWPQWPKVFGVDYGHGEV
Sbjct:   17 RGSFAAQKRGVALAGKKHEIWRDENDN-DNLPKVKRRDGSFAEIDKTRGFIDYYRNADPYRDPLERVFDWAEINSSGHDEVERSVQAARCMDCGTPFCQTHTGCPIHNLIPEWNDLVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAWEEGWVTPRIPEYRTGMNVAVVGSGPAGLAAADCLNQKGHKVTVYEREDRIGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTNANIGPDIDVNDLRAANDALVLTVGSTKPRDLPVPGRELKGIHFAMEFLTKNQKRLLMTRDGNLQSNWDAGFVTAEGKDVIVIGGGDTGTDCIGTSMRHRCRSLVNFELLPRPPNARAPTNPWPQWPKVFGVDYGHGEV 412          
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Match: A0A7S3Y096_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y096_HETAK)

HSP 1 Score: 675 bits (1742), Expect = 1.160e-239
Identity = 309/402 (76.87%), Postives = 354/402 (88.06%), Query Frame = 1
Query:   49 GRSHVAS-----QRRHVAAGGNHEIWREQSDTTDNTPKVKRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEINADGHNAVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIPTRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGATKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWDQGFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQWPKVFGVDYGHGEV 1239
            GR H+A        +  A    HEIWR++++  DN PKVKRRDGT AEID  RGFI+Y R  DPYRDP+ERVFDWEEIN+ GH++VERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELV+KG WRDA D LHKTNNFPEFTGRVCPAPCEG CVAGL+D PITIKNIEYSI++RA++EGW+ PR+P  RTGM+VAVVGSGPAGLA AD LNQ GHKVTVYERADRVGGLLMYGIPNMKL+K+TV+RRV LL EEGIEFVTGAN+GVD+DVND+R+ANDALVLT+G+T+PRDLP+PGR+L+G+HFAMEFLTKNQKRLL+T +G L+  WD+ F++AEGKDV+VIGGGDTGTDCIGTSMRHRC+S+ N ELLP+PP +RA  NPWPQWPKVFGVDYGHGEV
Sbjct:   63 GRRHIAGAFASFSSKPAAGFTKHEIWRDENEH-DNLPKVKRRDGTVAEIDNMRGFINYKRIADPYRDPLERVFDWEEINSSGHDSVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVYKGQWRDANDRLHKTNNFPEFTGRVCPAPCEGGCVAGLVDEPITIKNIEYSIVDRAWEEGWIAPRVPPFRTGMSVAVVGSGPAGLAAADQLNQMGHKVTVYERADRVGGLLMYGIPNMKLEKETVERRVQLLREEGIEFVTGANVGVDVDVNDLRSANDALVLTIGSTQPRDLPIPGRELQGVHFAMEFLTKNQKRLLLTKEGNLQSGWDESFVSAEGKDVVVIGGGDTGTDCIGTSMRHRCKSILNLELLPRPPDQRAPGNPWPQWPKVFGVDYGHGEV 463          
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Match: I2CNZ7_NANGC (Glutamate synthase (NADPH/NADH) small chain n=2 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNZ7_NANGC)

HSP 1 Score: 643 bits (1659), Expect = 9.700e-228
Identity = 289/381 (75.85%), Postives = 335/381 (87.93%), Query Frame = 1
Query:  100 HEIWREQSDTTDNTPKVKRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEINAD-GHNAVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIPTRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGATKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWDQGFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQWPKVFGVDYGHGEV 1239
            HE+WR+ ++  DN PKVKRRDG+ A I+K RGF+DYHRNPDPYRDP++RVFDW EI  D GH+ VER VQAARCMDCGTPFCQTHTGCPVNNLIPEWNELV+KG WR+AID LHKTNNFPEFTG VCPAPCEG CVAGL+D P+TIKNIEY+I+ERA++EGW+ PRIP  R+GM+VAVVGSGP+GLA ADCLNQ GHKVTVYER DR+GGLLMYGIPNMKLDK+ V RRVD+L EEGIEFVTG ++G D+ + D+RA  DALVLT+G+T PRDL VP R+  GIHFAMEFLTKNQKRL+MT +G+LE  WD+ FITAEGKDVIV+GGGDTGTDCIGTSMRHRC+S+ NFEL+P+PP ERA +NPWPQWPK++G+DYGH EV
Sbjct:   41 HEVWRDDNEQ-DNLPKVKRRDGSIAAIEKKRGFVDYHRNPDPYRDPLDRVFDWGEIKTDEGHDEVERKVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVYKGQWREAIDRLHKTNNFPEFTGLVCPAPCEGGCVAGLVDKPVTIKNIEYAIVERAWEEGWIIPRIPQYRSGMSVAVVGSGPSGLAAADCLNQMGHKVTVYEREDRIGGLLMYGIPNMKLDKEKVLRRVDMLREEGIEFVTGTHVGKDLAIEDLRANVDALVLTLGSTVPRDLRVPNREANGIHFAMEFLTKNQKRLMMTREGRLESGWDKSFITAEGKDVIVVGGGDTGTDCIGTSMRHRCKSIVNFELMPRPPNERAPHNPWPQWPKIYGMDYGHAEV 420          
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Match: A0A7S2Q1R0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1R0_9STRA)

HSP 1 Score: 627 bits (1616), Expect = 3.380e-223
Identity = 291/393 (74.05%), Postives = 333/393 (84.73%), Query Frame = 1
Query:   82 VAAGGNHEIWREQSDTTDNTPKVKRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEINA------DGHNAVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIPTRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGATKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWD-QGFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQWPKVFGVDYGHGEV 1239
            + + G HEIWRE     DN PKVKRRDG++  I+K RGFI+Y RN +PYRD  +RV DWEE+N       + H ++ER VQAARCMDCGTPFCQTHTGCPVNNLIPEWN LV+ G W DAI+ LHKTNNFPEFTGRVCPAPCEGACVAGL+D PITIK+IEYSI++ A+ EG +TPRIP  RTGM VAVVGSGPAGLA AD LNQ GHKVTV+ERADR+GGLLMYGIPNMKL+KDTV RRV+LL EEGIEFVT ANIG ++DVN++RA  DAL LT+G+TKPRDLPVPGRDLKG+HFAMEFLT+NQKRLL+T +G LE NWD + FITA GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+P PP ERA +NPWPQWP+V+G+DYGH EV
Sbjct:   30 IGSDGKHEIWREGIYDHDNEPKVKRRDGSYQPIEKLRGFINYQRNKEPYRDASKRVLDWEELNPVEGRDDEKHTSIERKVQAARCMDCGTPFCQTHTGCPVNNLIPEWNNLVYNGQWSDAIERLHKTNNFPEFTGRVCPAPCEGACVAGLVDQPITIKDIEYSIVDNAWKEGLITPRIPKERTGMTVAVVGSGPAGLAAADQLNQMGHKVTVFERADRIGGLLMYGIPNMKLEKDTVDRRVNLLREEGIEFVTNANIGQNVDVNELRANFDALTLTLGSTKPRDLPVPGRDLKGVHFAMEFLTENQKRLLLTKEGTLESNWDKEKFITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPCPPNERAPDNPWPQWPRVYGIDYGHAEV 422          
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Match: A0A1Z5JPW8_FISSO (Glutamate synthase (NADPH/NADH) small chain n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPW8_FISSO)

HSP 1 Score: 627 bits (1618), Expect = 2.510e-221
Identity = 291/393 (74.05%), Postives = 335/393 (85.24%), Query Frame = 1
Query:   82 VAAGGNHEIWRE-QSDTTDNTPKVKRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEIN-----ADGHNAVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIPTRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGATKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWD-QGFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQWPKVFGVDYGHGEV 1239
            + A G HEIWRE QS   DN P+VKRRDG++A I+K RGF++Y RNP+PYR P ERV DW E+N     ++ H +VER VQAARCMDCGTPFCQTH GCPVNNLIPEWN LV+ G W DAID LHKTNNFPEFTGRVCPAPCEG+CVAGL+D+P+TIKNIEYSI++RA+ EG +TPRIP  RTGM VAVVGSGP+GLA AD LNQ GHKVTVYERADR+GGLLMYGIPNMKL+KDTV RRV+LL EEGIEFVT ANIG ++D+N++RA  DAL+L VG+TKPRDLPVPGR+LKGIHFAMEFLT NQK+LLMT +G LE  W+ + +ITA GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+P+PP  RA +NPWPQWP+VFGVDYGH E 
Sbjct:   29 LGADGRHEIWREGQSSDHDNEPRVKRRDGSYASIEKLRGFLNYQRNPEPYRKPTERVRDWGELNPTEEDSEYHTSVERKVQAARCMDCGTPFCQTHAGCPVNNLIPEWNNLVYNGQWEDAIDRLHKTNNFPEFTGRVCPAPCEGSCVAGLVDAPVTIKNIEYSIVDRAWKEGLITPRIPENRTGMTVAVVGSGPSGLAAADQLNQMGHKVTVYERADRIGGLLMYGIPNMKLEKDTVDRRVNLLREEGIEFVTNANIGQNVDINELRANVDALILCVGSTKPRDLPVPGRELKGIHFAMEFLTANQKKLLMTKEGTLESQWEKENWITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPMSRAPDNPWPQWPRVFGVDYGHAEA 421          
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Match: A0A6U3PC01_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PC01_9STRA)

HSP 1 Score: 627 bits (1618), Expect = 3.680e-221
Identity = 288/392 (73.47%), Postives = 334/392 (85.20%), Query Frame = 1
Query:   82 VAAGGNHEIWREQSDTTDNTPKVKRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEINA-----DGHNAVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIPTRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGATKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWDQ-GFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQWPKVFGVDYGHGEV 1239
            +A  G HE+WRE     DN PKVKRRDG+F  ++K RGFI+Y RNP+PYR P+ER+ DWEE+N      + H  VER VQAARCMDCGTPFCQTH+GCPVNNLIPEWN LV++G W DAID LHKTNNFPEFTGRVCPAPCEG+CVAGL+D P+TIKNIEYSI++RA+ +G + PRIP  R+GM VAVVGSGPAGLATAD LNQ GHKVTV+ERADRVGGLLMYGIPNMKL+K+TV+RRVDLL EEGIEFVT ANIG ++D N++RA  D++ L +G+TKPRDLPVPGR+LKG+HFAMEFLT NQKRLLMT +G LE  W++  FITA GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+P+PP ERA +NPWPQWP+VFGVDYGH EV
Sbjct:   41 IAQDGRHEVWREGIYDHDNEPKVKRRDGSFQPVEKLRGFINYQRNPEPYRKPLERLMDWEELNPVEGDDEKHTEVERKVQAARCMDCGTPFCQTHSGCPVNNLIPEWNNLVYQGQWADAIDRLHKTNNFPEFTGRVCPAPCEGSCVAGLVDGPVTIKNIEYSIVDRAWQDGLIQPRIPRERSGMTVAVVGSGPAGLATADQLNQMGHKVTVFERADRVGGLLMYGIPNMKLEKETVERRVDLLREEGIEFVTNANIGYNVDANELRANFDSVCLCLGSTKPRDLPVPGRELKGVHFAMEFLTANQKRLLMTKEGTLESKWEKDNFITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPMERAPDNPWPQWPRVFGVDYGHAEV 432          
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Match: A0A7S3NK96_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK96_9STRA)

HSP 1 Score: 625 bits (1612), Expect = 9.120e-221
Identity = 289/382 (75.65%), Postives = 331/382 (86.65%), Query Frame = 1
Query:  100 HEIWREQSDTTDNTPKVKRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEIN-ADGHNAVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIPTRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGATKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWDQ-GFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQWPKVFGVDYGHGEV 1239
            HEIWRE+++  DN PKV+RRDGT AEI   RGF+DY R+PDPYRDPIERVFDW EIN   GH+AVERTVQAARCMDCGTPFCQTHTGCP+NNLIPE+N LV++  W+ A+D L +TNNFPEFTGRVCPAPCEGACVAGL+DSP+TIKNIEYSI+ER F+EGW+TPRIP  R+GM+VAV+GSGPAGLA AD LNQ GHKVTVYER DR+GGLLMYGIPNMKLDKD V RRV LLAEEGIEFVT A+IG ++DVN +RA NDA++L +G+T PRDLP+PGR   GIHFAMEFLT+NQKRLLMT +G L   WD+  F+TAEG+DVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+ +PP  RA  NPWP+WPKVFGVDYGH EV
Sbjct:   27 HEIWREENEV-DNLPKVRRRDGTIAEIANVRGFVDYERHPDPYRDPIERVFDWAEINDTQGHDAVERTVQAARCMDCGTPFCQTHTGCPINNLIPEFNSLVYQDQWKQALDRLSQTNNFPEFTGRVCPAPCEGACVAGLVDSPVTIKNIEYSIVERGFEEGWITPRIPKYRSGMSVAVIGSGPAGLAAADNLNQAGHKVTVYEREDRIGGLLMYGIPNMKLDKDKVLRRVHLLAEEGIEFVTNAHIGQNVDVNVLRANNDAVILAIGSTMPRDLPLPGRQGTGIHFAMEFLTQNQKRLLMTREGTLASAWDKDSFVTAEGRDVIVIGGGDTGTDCIGTSMRHRCKSIVNFELMGQPPPTRASTNPWPEWPKVFGVDYGHAEV 407          
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Match: A0A7S3LHR0_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LHR0_9STRA)

HSP 1 Score: 625 bits (1612), Expect = 4.250e-220
Identity = 289/392 (73.72%), Postives = 332/392 (84.69%), Query Frame = 1
Query:   82 VAAGGNHEIWREQSDTTDNTPKVKRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEIN-ADG----HNAVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIPTRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGATKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWD-QGFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQWPKVFGVDYGHGEV 1239
            +   G HEIWRE     DN PKVKRRDGT+  I+K RGF+ Y RN +PYR P++R+ DW E+N  +G    H+ VE  VQAARCMDCGTPFCQTHTGCPVNNLIPEWN LV+ G WRDAID LHKTNNFPEFTGRVCPAPCEG+CVAGL+DSP+TIKNIEY+I++ A+  G++TPRIP  RTGM VAVVGSGPAGLA AD LNQ GHKVTVYERADR+GGLLMYGIPNMKL+K+TV+RRV+LL EEGIEFVT A+IG ++DVN++RA NDA+ L +GATKPRDLPVPGRDLKG+HFAMEFLT NQKRLLMT +G LE  W+ + FITA GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+P+PP  RA +NPWPQWP+VFGVDYGH EV
Sbjct:   53 IGMDGKHEIWREGIYDHDNEPKVKRRDGTYQSIEKLRGFLSYERNAEPYRRPLDRIMDWGELNPVEGDELHHSPVELKVQAARCMDCGTPFCQTHTGCPVNNLIPEWNNLVYNGQWRDAIDRLHKTNNFPEFTGRVCPAPCEGSCVAGLVDSPVTIKNIEYAIVDEAWKNGYITPRIPKERTGMTVAVVGSGPAGLAAADQLNQMGHKVTVYERADRIGGLLMYGIPNMKLEKETVERRVNLLREEGIEFVTNADIGRNVDVNELRANNDAVALCMGATKPRDLPVPGRDLKGVHFAMEFLTANQKRLLMTKEGTLESKWEKENFITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPMSRAPDNPWPQWPRVFGVDYGHAEV 444          
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Match: B7FZB0_PHATC (Synthase of glutamate synthase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZB0_PHATC)

HSP 1 Score: 622 bits (1603), Expect = 5.470e-219
Identity = 284/392 (72.45%), Postives = 333/392 (84.95%), Query Frame = 1
Query:   82 VAAGGNHEIWREQSDTTDNTPKVKRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEINADG-----HNAVERTVQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIPTRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGATKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWDQ-GFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQWPKVFGVDYGHGEV 1239
            +   G HEIWRE     DN PK+KRRDG+++ I+K RGF++Y RNP+PYR P+ERV DW E+N        H  +ER VQAARCMDCGTPFCQTHTGCPVNNLIPEWN LV+ G W +AID LHKTNNFPEFTGRVCPAPCEG+CVAGL+DSP+TIKNIEY+I++RA+ +G +TPRIP  RTGM VAV+GSGPAGLA AD LNQ GHKVTVYERADRVGGLLMYGIPNMKL+K+TV RRV+LL EEGIEFVT A+IG ++D+N++R+ +DAL L +GATKPRDLPVPGR+LKG+HFAMEFLT NQKRLLMT +G LE  W++  FITA GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+P+PP +RA +NPWPQWP+VFG+DYGH EV
Sbjct:   34 IGEDGRHEIWREGIYDHDNEPKIKRRDGSYSSIEKLRGFLNYERNPEPYRKPLERVMDWGELNPTEEDELHHTDLERKVQAARCMDCGTPFCQTHTGCPVNNLIPEWNNLVYNGQWEEAIDRLHKTNNFPEFTGRVCPAPCEGSCVAGLVDSPVTIKNIEYAIVDRAWKDGLITPRIPKERTGMTVAVIGSGPAGLAAADQLNQLGHKVTVYERADRVGGLLMYGIPNMKLEKETVDRRVNLLREEGIEFVTNADIGNNVDINELRSNHDALALCMGATKPRDLPVPGRELKGVHFAMEFLTANQKRLLMTKEGTLESKWEKDNFITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPMDRATDNPWPQWPRVFGLDYGHAEV 425          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9689.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVE7_ECTSI1.350e-26687.76Glutamate synthase (NADH/NADPH-dependent) n=2 Tax=... [more]
A0A836CI68_9STRA2.750e-26186.15Glutamate synthase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S3Y096_HETAK1.160e-23976.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
I2CNZ7_NANGC9.700e-22875.85Glutamate synthase (NADPH/NADH) small chain n=2 Ta... [more]
A0A7S2Q1R0_9STRA3.380e-22374.05Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A1Z5JPW8_FISSO2.510e-22174.05Glutamate synthase (NADPH/NADH) small chain n=2 Ta... [more]
A0A6U3PC01_9STRA3.680e-22173.47Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S3NK96_9STRA9.120e-22175.65Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3LHR0_9STRA4.250e-22073.72Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
B7FZB0_PHATC5.470e-21972.45Synthase of glutamate synthase n=3 Tax=Phaeodactyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9689contigC-tenellus_contig9689:2333..5387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr20342
PFAMsFer4_20,Pyr_redox_2
Model size1248
Max annot lvl2836|Bacillariophyta
KEGG rclassRC00006,RC00010,RC02799
KEGG koko:K00266
KEGG ReactionR00093,R00114,R00248
KEGG Pathwayko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230
Hectar predicted targeting categorymitochondrion
Exons5
Evalue8.98e-220
EggNOG OGsCOG0069@1|root,KOG0399@2759|Eukaryota,2XB4G@2836|Bacillariophyta
EC1.4.1.13,1.4.1.14
DescriptionDihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
Cds size1248
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790195.8227587-CDS-C-tenellus_contig9689:2332..27731680790195.8227587-CDS-C-tenellus_contig9689:2332..2773Choristocarpus tenellus KU2346CDSC-tenellus_contig9689 2333..2773 +
1680790195.841919-CDS-C-tenellus_contig9689:3303..35521680790195.841919-CDS-C-tenellus_contig9689:3303..3552Choristocarpus tenellus KU2346CDSC-tenellus_contig9689 3304..3552 +
1680790195.854561-CDS-C-tenellus_contig9689:3915..41611680790195.854561-CDS-C-tenellus_contig9689:3915..4161Choristocarpus tenellus KU2346CDSC-tenellus_contig9689 3916..4161 +
1680790195.865617-CDS-C-tenellus_contig9689:4445..45831680790195.865617-CDS-C-tenellus_contig9689:4445..4583Choristocarpus tenellus KU2346CDSC-tenellus_contig9689 4446..4583 +
1680790195.881312-CDS-C-tenellus_contig9689:5213..53871680790195.881312-CDS-C-tenellus_contig9689:5213..5387Choristocarpus tenellus KU2346CDSC-tenellus_contig9689 5214..5387 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9689.1.1prot_C-tenellus_contig9689.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9689 2333..5387 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9689.1.1

>prot_C-tenellus_contig9689.1.1 ID=prot_C-tenellus_contig9689.1.1|Name=mRNA_C-tenellus_contig9689.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=416bp
MLAGVGRAFVRRTAPVGRSHVASQRRHVAAGGNHEIWREQSDTTDNTPKV
KRRDGTFAEIDKTRGFIDYHRNPDPYRDPIERVFDWEEINADGHNAVERT
VQAARCMDCGTPFCQTHTGCPVNNLIPEWNELVFKGAWRDAIDNLHKTNN
FPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAFDEGWVTPRIP
TRRTGMNVAVVGSGPAGLATADCLNQRGHKVTVYERADRVGGLLMYGIPN
MKLDKDTVQRRVDLLAEEGIEFVTGANIGVDIDVNDVRAANDALVLTVGA
TKPRDLPVPGRDLKGIHFAMEFLTKNQKRLLMTGDGKLERNWDQGFITAE
GKDVIVIGGGDTGTDCIGTSMRHRCRSMANFELLPKPPAERAKNNPWPQW
PKVFGVDYGHGEVHP*
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mRNA from alignment at C-tenellus_contig9689:2333..5387+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9689.1.1 ID=mRNA_C-tenellus_contig9689.1.1|Name=mRNA_C-tenellus_contig9689.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3055bp|location=Sequence derived from alignment at C-tenellus_contig9689:2333..5387+ (Choristocarpus tenellus KU2346)
ATGCTCGCTGGGGTTGGAAGGGCCTTTGTAAGGCGGACCGCTCCTGTAGG TCGAAGCCATGTGGCCTCACAGCGACGACACGTTGCCGCCGGTGGAAACC ACGAGATATGGCGGGAGCAGAGCGATACGACGGACAACACGCCTAAGGTG AAGCGCAGGGATGGCACTTTTGCTGAGATCGACAAGACTCGGGGTTTCAT CGATTACCACCGCAATCCAGACCCTTACCGTGATCCGATTGAGCGTGTCT TCGATTGGGAGGAGATCAATGCAGACGGACACAATGCGGTCGAGCGCACG GTACAAGCGGCGCGGTGCATGGACTGTGGGACACCCTTTTGCCAGACGCA CACTGGCTGCCCCGTCAACAATCTCATCCCGGAGTGGAATGAGCTTGTCT TTAAAGGGGCTTGGCGGGATGCGATTGATAACCTACACAAGGTGAGGGTA CGGATGTAGTTTCTCGCTCTCTGTGGGTGGATGGGTGGGGAAGAGAGTCT GCCAGAGTGATCTAAGCTCAACTCAATGTACCACGTTCTGTGGATCCGAC TTCGTCCACTCCCCTGCCGCTCTTGGCTCCCTAGCATTGCTTTTTCTTTT ACCTGTGAGTGAAATCAGTTTTGTTTAGTACATTCCTTTGGCTCCACAAT TGTTCGTTAAATGCCCTGAAACATTGTGAACCCTTGACAAGGTGTGTCTG CAATTACCTCAAAGAATTACATACACCAAGTTTGATATGTTAACTTATCA ATGACCTTGTTTGACCTATATGTGCGGCTATGGGCACACTCTTATCTTAT CTAAAATTTGTTAATGTTTCTTTGGGCATATTAACAGGACACAACTCTCT TCCCGACGTCAACTTCTGAACATCAAGCCTTGGTGCTTGGTATTTTTTTC CACCTAAATAGAGCGCTTTGAAGTTCACACCTCTTACCTCTCTGCCACCC TTTCTTGTTCTTCTCGCAAAGACAAACAATTTCCCCGAGTTCACCGGACG GGTCTGCCCAGCCCCGTGCGAAGGCGCATGTGTCGCAGGCCTCATTGATT CGCCGATCACCATCAAGAATATTGAATACTCCATAATCGAAAGGGCATTT GATGAGGGATGGGTTACGCCTCGCATACCTACCAGACGCACCGGCATGAA CGTTGCGGTGGTGGGATCTGGCCCTGCTGGACTTGCCACGGCAGACTGCC TTAACCAGCGTGGTCACAAGGTGACTTGATATCATAATATGTACCTGTAT TCATGCTCTATGGTGCAGCTGTAGGGCATAGTGCCTTGGTGTTTGTTCGT GTTTGCCATACCTTTGTCCTCGGCACAAGCTGTGTGTCTGTTGTCTGTAT TGATACTCTACTGGTTGGCAGATGCTAAGACGTGTTGTCACTGTGCCAAA AAAAGTGTTTTCAACATGTCCTTGATTGGCAGATGCTCATGAACCGTTGG GCTCGACTTTTTACTGTTTTGAGTATCATCCCCATGATGGGCATGCAGAC CTCCAATGGTTTTAACCCCACAAACCGTTTGTTTCTTGCTACTTCTTTTG TTGACCTTGTCTTGCGATCTCCTTCTGTTGAAGGTCACTGTCTATGAACG AGCTGACCGAGTGGGGGGTCTACTGATGTATGGCATCCCTAACATGAAGC TGGACAAGGACACTGTCCAGCGCAGGGTAGACCTTCTAGCTGAAGAGGGC ATTGAGTTTGTCACTGGTGCTAATATCGGTGTGGATATCGATGTGAACGA TGTTCGGGCTGCAAATGATGCCCTTGTGCTCACTGTGGGAGCCACCAAGC CGCGCGACCTTCCTGTCCCAGGGCGAGATGTGAGGAACCAGAATAACACT ATTTCTGCTTTGGTAGGGGAAAGTGGGGAATTGAGCCTCTCTCCTGTGAT GTTGAGGTCACGTTTTAACGCCTGTACACTATGGCAGGATGGTATGACCG TCTTCTGTGCTCTGCATTTAAAACTTGTGTGCTGGGGTAGTCAAAGTCGA CGAAATGTTCATGTTGAAATGAATTCATGATGTGTTTTCACATTGAACCC GACATTTCTTTCCTCCCCCTCCCCCAAACCCATGTTTTTGCTCCCCTTGC CTGTCTCTCTCAGTTGAAGGGAATACACTTTGCAATGGAGTTCCTGACCA AGAACCAGAAACGCCTGCTCATGACTGGGGATGGCAAGCTGGAGAGGAAC TGGGACCAGGGATTCATCACTGCGGAGGGGAAGGATGTTATAGTGATAGG GGTAAGCTCTTTTGTTTGATAACTGTGTTTGTCAATTTATTTCTGCCTTT TCCTTTTTCCAGTCTCAAGATTTTGTGCTAAGAAAATTGAACTGTAGGTT CTGCTTTTGATGTCTTTCAAGGCTGTTCGCTTTATCCTACTTGATAGTTT GTGGTGTATTTGTCTGTTCTTGTCTGCTGCATGATGATGGAAATGGGTTA CAACCTCTGGTTGTTTGGACACGATGGTTTCAAGCTTTCCATTTTATCCT GGTCTTTTGCTAGACTTGGTGGTAGCAGAAATATCAATATATAGGGTGGT ATTTGCTGGCTTTCCTGAAAGCCTACAAATATCGTGTTTGTGATTGTATG CTGTGGAAGTAAGTCTAGAACTTTCTGAGGATTGGAGCGTTTTGCAATCA ATTTTAATATACTTCGTAGGTGTGTCACATAGGAATAAAAAATGCGCGTT TTTTGTTGTTGTGTATATGCAGTGGTCTTGAGCTGGAGTTGCAGAGAAGT GGCATGGCATTTCTTATCTCGACAAGAGTCGTACACCTTGCCGCAGTAGT GTTCACGAAGGCGTTACTCACCAACTTACATCTAACCATTTCATCATCCC CTTGTTGGGCATTTGGGGGACTGTTTACCAGGGTGGTGATACAGGAACAG ACTGCATAGGTACATCGATGAGGCACCGGTGCAGGTCCATGGCGAACTTC GAACTTCTCCCCAAGCCTCCAGCGGAGCGTGCTAAGAACAACCCGTGGCC TCAGTGGCCCAAGGTCTTTGGCGTTGACTATGGTCATGGAGAGGTACACC CTTAG
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Coding sequence (CDS) from alignment at C-tenellus_contig9689:2333..5387+

>mRNA_C-tenellus_contig9689.1.1 ID=mRNA_C-tenellus_contig9689.1.1|Name=mRNA_C-tenellus_contig9689.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1248bp|location=Sequence derived from alignment at C-tenellus_contig9689:2333..5387+ (Choristocarpus tenellus KU2346)
ATGCTCGCTGGGGTTGGAAGGGCCTTTGTAAGGCGGACCGCTCCTGTAGG
TCGAAGCCATGTGGCCTCACAGCGACGACACGTTGCCGCCGGTGGAAACC
ACGAGATATGGCGGGAGCAGAGCGATACGACGGACAACACGCCTAAGGTG
AAGCGCAGGGATGGCACTTTTGCTGAGATCGACAAGACTCGGGGTTTCAT
CGATTACCACCGCAATCCAGACCCTTACCGTGATCCGATTGAGCGTGTCT
TCGATTGGGAGGAGATCAATGCAGACGGACACAATGCGGTCGAGCGCACG
GTACAAGCGGCGCGGTGCATGGACTGTGGGACACCCTTTTGCCAGACGCA
CACTGGCTGCCCCGTCAACAATCTCATCCCGGAGTGGAATGAGCTTGTCT
TTAAAGGGGCTTGGCGGGATGCGATTGATAACCTACACAAGACAAACAAT
TTCCCCGAGTTCACCGGACGGGTCTGCCCAGCCCCGTGCGAAGGCGCATG
TGTCGCAGGCCTCATTGATTCGCCGATCACCATCAAGAATATTGAATACT
CCATAATCGAAAGGGCATTTGATGAGGGATGGGTTACGCCTCGCATACCT
ACCAGACGCACCGGCATGAACGTTGCGGTGGTGGGATCTGGCCCTGCTGG
ACTTGCCACGGCAGACTGCCTTAACCAGCGTGGTCACAAGGTCACTGTCT
ATGAACGAGCTGACCGAGTGGGGGGTCTACTGATGTATGGCATCCCTAAC
ATGAAGCTGGACAAGGACACTGTCCAGCGCAGGGTAGACCTTCTAGCTGA
AGAGGGCATTGAGTTTGTCACTGGTGCTAATATCGGTGTGGATATCGATG
TGAACGATGTTCGGGCTGCAAATGATGCCCTTGTGCTCACTGTGGGAGCC
ACCAAGCCGCGCGACCTTCCTGTCCCAGGGCGAGATTTGAAGGGAATACA
CTTTGCAATGGAGTTCCTGACCAAGAACCAGAAACGCCTGCTCATGACTG
GGGATGGCAAGCTGGAGAGGAACTGGGACCAGGGATTCATCACTGCGGAG
GGGAAGGATGTTATAGTGATAGGGGGTGGTGATACAGGAACAGACTGCAT
AGGTACATCGATGAGGCACCGGTGCAGGTCCATGGCGAACTTCGAACTTC
TCCCCAAGCCTCCAGCGGAGCGTGCTAAGAACAACCCGTGGCCTCAGTGG
CCCAAGGTCTTTGGCGTTGACTATGGTCATGGAGAGGTACACCCTTAG
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