mRNA_C-tenellus_contig968.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Match: A0A397ACU4_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACU4_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.090e-44 Identity = 91/145 (62.76%), Postives = 107/145 (73.79%), Query Frame = 1 Query: 10 ADEGLTDMLRVNLTRLISYARSADPQLQRQVAEKLANEAVQPSRQAQIVALGGLKLLLPLAQSTDVEVQRLAVHALANLSVNGRAFVNFTSYH----HCSDP--AENQTLMAEEGGIEALVAILDTHHINLQRQGAKALANLGVN 426 +DEG TD L++NL RLI+YA+SAD LQR+VAEKLANEAV+P RQ QIV L GLKLLLPL QS D EVQRLA HALANLSVN + NF H H D A+NQ MA EGGI+ L+ +L + + ++QRQ AKALANLGVN Sbjct: 19 SDEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLTQSKDTEVQRLAAHALANLSVNCSSH-NFIWLHSTTPHLHDYYLADNQAKMANEGGIDMLIHLLQSTNEHVQRQAAKALANLGVN 162
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Match: A0A418DV07_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DV07_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.380e-44 Identity = 91/145 (62.76%), Postives = 107/145 (73.79%), Query Frame = 1 Query: 10 ADEGLTDMLRVNLTRLISYARSADPQLQRQVAEKLANEAVQPSRQAQIVALGGLKLLLPLAQSTDVEVQRLAVHALANLSVNGRAFVNFTSYH----HCSDP--AENQTLMAEEGGIEALVAILDTHHINLQRQGAKALANLGVN 426 +DEG TD L++NL RLI+YA+SAD LQR+VAEKLANEAV+P RQ QIV L GLKLLLPL QS D EVQRLA HALANLSVN + NF H H D A+NQ MA EGGI+ L+ +L + + ++QRQ AKALANLGVN Sbjct: 19 SDEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPLTQSKDTEVQRLAAHALANLSVNCSSH-NFIWLHSTTPHLHDYYLADNQAKMANEGGIDMLIHLLQSTNEHVQRQAAKALANLGVN 162
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Match: A0A3R6WRV7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WRV7_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.540e-31 Identity = 81/146 (55.48%), Postives = 100/146 (68.49%), Query Frame = 1 Query: 10 ADEGLTDMLRVNLTRLISYARSADPQLQRQVAEKLANEAVQPSRQAQIVALGGLK----LLLPLAQSTDVEVQRLAVHALANLSVN---GRAFVNFTSYHHCSDPAENQTLMAEEGGIEALVAILDTHHINLQRQGAKALANLGVN 426 +DEG TD L++NL RLI+YA+SAD LQR+VAEKLANEAV+ R+ V LLLPL +S D EVQRLA HALANLSVN A V + H +D NQT MA EGGI+ L+ +L +++ ++QRQ AKALANLGVN Sbjct: 1259 SDEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVK--RELLSVRCSTTSSTFMLLLPLTESKDTEVQRLAAHALANLSVNCTCSAALVFVVTIFHSAD---NQTKMANEGGIDMLIHLLQSNNEHVQRQAAKALANLGVN 1399
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Match: A0A6A5AFC1_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AFC1_9STRA) HSP 1 Score: 118 bits (295), Expect = 3.800e-29 Identity = 72/115 (62.61%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 100 VAEKLANEAVQPSRQAQIVALGGLKLLLPLAQSTDVEVQRLAVHALANLSVNGRAFVNFTSYH----HCSDP--AENQTLMAEEGGIEALVAILDTHHINLQRQGAKALANLGVN 426 VAEKLANEAV+P RQ QIV L GLKLLLPL QS D EVQRLA HALANLSVN + NF H H D A+NQ MA EGGI+ L+ +L + + ++QRQ AKALANLGVN Sbjct: 30 VAEKLANEAVKPDRQVQIVELDGLKLLLPLTQSKDTEVQRLAAHALANLSVNCSSH-NFIWLHSTTPHLHDYYLADNQAKMANEGGIDMLIHLLQSTNEHVQRQAAKALANLGVN 143
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Match: F0WLI4_9STRA (Vacuolar protein 8 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLI4_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.430e-28 Identity = 71/144 (49.31%), Postives = 92/144 (63.89%), Query Frame = 1 Query: 10 ADEGLTDMLRVNLTRLISYARSADPQLQRQVAEKLANEAVQPSRQAQIVALGGLKLLLPLAQSTDVEVQRLAVHALANLSVNGRA-----FVNFTSYHHCSDPAENQTLMAEEGGIEALVAILDTHHINLQRQGAKALANLGVN 426 +DEG T+ L++NL RLI+YA+SAD LQR+VAEKLANEAV+P RQ QIV L GL+LLLPL NLSVN + ++ Y+ A+NQ MA EGGIE L+ +L + + ++QRQ AKA+ANL VN Sbjct: 18 SDEGFTEALQINLQRLIAYAKSADTSLQREVAEKLANEAVKPDRQVQIVELCGLELLLPLTXXXXXXXXXXXXXXXXNLSVNCKVEGVVEWLQINLYN----VADNQQKMAGEGGIEMLIDLLGSSNEHVQRQAAKAIANLAVN 157
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Match: A0A5D6Y1Z7_9STRA (Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Z7_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.260e-27 Identity = 61/82 (74.39%), Postives = 67/82 (81.71%), Query Frame = 1 Query: 10 ADEGLTDMLRVNLTRLISYARSADPQLQRQVAEKLANEAVQPSRQAQIVALGGLKLLLPLAQSTDVEVQRLAVHALANLSVN 255 +D+ T+ LRVNL RLI YA+SAD LQR+VAEKLANEAV+P RQ QIV L GLKLLLPL QS D EVQRLA HALANLSVN Sbjct: 20 SDDAFTEALRVNLQRLIVYAKSADTSLQREVAEKLANEAVKPDRQVQIVELEGLKLLLPLTQSKDTEVQRLAAHALANLSVN 101
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Match: A0A835YNM9_9STRA (Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM9_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.260e-22 Identity = 66/152 (43.42%), Postives = 80/152 (52.63%), Query Frame = 1 Query: 13 DEGLTDMLRVNLTRLISYARSADPQLQRQVAEKLANEAVQPSRQAQIVALGGLKLLLPLAQSTDVEVQRLAVHALANLSVNGRAFVNFTSYHHC--------------------SDPAENQTLMAEEGGIEALVAILDTHHINLQRQGAKAL 408 DEGL+ LR++L+RLI+YA SAD LQRQVAEKLANEAV+P RQ QI LGGL+LLLPL + + C S A+NQ MA+ GGIE LVAILD+ LQRQ +K+L Sbjct: 20 DEGLSTALRIHLSRLIAYAESADVSLQRQVAEKLANEAVRPERQVQIAELGGLRLLLPLTRXXXXXXXXXXXXXXXXXXXXXXXXXRALQFERCCFLMATWRQRAVWRCVLANVSASADNQKAMADNGGIEMLVAILDSPTEALQRQASKSL 171
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Match: D7G6Y7_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y7_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 2.410e-20 Identity = 50/59 (84.75%), Postives = 54/59 (91.53%), Query Frame = 1 Query: 13 DEGLTDMLRVNLTRLISYARSADPQLQRQVAEKLANEAVQPSRQAQIVALGGLKLLLPL 189 D+ LTD LR NLTRLI+YA+SADP LQRQVAEKLANEAV+PSRQAQIV LGGLKLLLPL Sbjct: 19 DDSLTDALRSNLTRLIAYAKSADPSLQRQVAEKLANEAVKPSRQAQIVQLGGLKLLLPL 77
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Match: A0A7S1XQE0_9STRA (Vacuolar protein 8 n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQE0_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.390e-17 Identity = 63/160 (39.38%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 13 DEGLTDMLRVNLTRLISYARSADPQLQRQVAEKLANEAVQPSRQAQIVALGGLKLLLPLAQSTDVEVQRLAVHALANLSVNGRAFVNFTS-----------------YHHCSDPAENQTLMAEEGGIEALVAILDTHHINLQRQGAKALANLGVNTHNKE 441 + G+++++R L+RLI YA S+D QLQR VAEKLANEAV+P+RQ QIV LGGL+LLLPL S H C P TL+ GIE LV +L + + +QRQ +KA+AN+ VN NKE Sbjct: 72 ENGISEVMRTQLSRLIIYAESSDVQLQRDVAEKLANEAVKPARQVQIVELGGLELLLPLTHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGESRGPPAREAPHCLQHSCVTPI--LTLL----GIEMLVHLLGSTNEAVQRQASKAIANMAVNRSNKE 225
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Match: A0A6S9E232_HETAK (Vacuolar protein 8 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E232_HETAK) HSP 1 Score: 85.5 bits (210), Expect = 1.010e-16 Identity = 46/59 (77.97%), Postives = 51/59 (86.44%), Query Frame = 1 Query: 13 DEGLTDMLRVNLTRLISYARSADPQLQRQVAEKLANEAVQPSRQAQIVALGGLKLLLPL 189 +EGLT +LRV+L+RLI YA SAD LQRQVAEKLANEAV+P RQ QIV LGGLKLLLPL Sbjct: 22 EEGLTKLLRVHLSRLIVYAESADCHLQRQVAEKLANEAVKPERQVQIVELGGLKLLLPL 80 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig968.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig968.1.2 >prot_C-tenellus_contig968.1.2 ID=prot_C-tenellus_contig968.1.2|Name=mRNA_C-tenellus_contig968.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=195bp MSCADEGLTDMLRVNLTRLISYARSADPQLQRQVAEKLANEAVQPSRQAQback to top mRNA from alignment at C-tenellus_contig968:1093..2094- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig968.1.2 ID=mRNA_C-tenellus_contig968.1.2|Name=mRNA_C-tenellus_contig968.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1002bp|location=Sequence derived from alignment at C-tenellus_contig968:1093..2094- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig968:1093..2094- >mRNA_C-tenellus_contig968.1.2 ID=mRNA_C-tenellus_contig968.1.2|Name=mRNA_C-tenellus_contig968.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=585bp|location=Sequence derived from alignment at C-tenellus_contig968:1093..2094- (Choristocarpus tenellus KU2346)back to top |