mRNA_C-tenellus_contig9679.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Match: A0A1M2Z804_9FIRM (Thioredox_DsbH domain-containing protein n=1 Tax=Clostridiales bacterium 43-6 TaxID=1895747 RepID=A0A1M2Z804_9FIRM) HSP 1 Score: 139 bits (350), Expect = 1.290e-40 Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 1 Query: 19 TNRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGYSTCHWCHVMERESFESLAVAKILNKNFVAVKV 252 TNRL ETSPYLLQHAHNPV W PWGEEAF KAK EDKP+FLS+GYSTCHWCHVMERESFE VA++LN FV++KV Sbjct: 5 TNRLIHETSPYLLQHAHNPVDWYPWGEEAFAKAKAEDKPVFLSIGYSTCHWCHVMERESFEDTEVAQVLNAQFVSIKV 82
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Match: A0A0B7A9M9_9EUPU (Thioredox_DsbH domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7A9M9_9EUPU) HSP 1 Score: 135 bits (340), Expect = 9.450e-40 Identity = 57/78 (73.08%), Postives = 68/78 (87.18%), Query Frame = 1 Query: 19 TNRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGYSTCHWCHVMERESFESLAVAKILNKNFVAVKV 252 TNRL E SPYLLQHAHNPV W PWG+EAF KAKNE+KPIFLS+GYSTCHWCHVME ESFE++ + ++LN +FV++KV Sbjct: 12 TNRLAQEKSPYLLQHAHNPVDWHPWGDEAFKKAKNENKPIFLSIGYSTCHWCHVMEHESFENVEIGQLLNDSFVSIKV 89
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Match: A0A6I9PSI2_9TELE (spermatogenesis-associated protein 20-like n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9PSI2_9TELE) HSP 1 Score: 138 bits (347), Expect = 1.310e-39 Identity = 61/78 (78.21%), Postives = 66/78 (84.62%), Query Frame = 1 Query: 19 TNRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGYSTCHWCHVMERESFESLAVAKILNKNFVAVKV 252 TNRL E SPYLLQHAHNPV W PWG+EAF KAK+EDKPIFLSVGYSTCHWCHVMERESFE + KIL+ NFV +KV Sbjct: 84 TNRLSLERSPYLLQHAHNPVDWYPWGKEAFDKAKSEDKPIFLSVGYSTCHWCHVMERESFEDEEIGKILSDNFVCIKV 161
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Match: A0A382U517_9ZZZZ (Thioredox_DsbH domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382U517_9ZZZZ) HSP 1 Score: 137 bits (344), Expect = 1.510e-39 Identity = 59/77 (76.62%), Postives = 65/77 (84.42%), Query Frame = 1 Query: 19 TNRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGYSTCHWCHVMERESFESLAVAKILNKNFVAVK 249 TNRL E SPYLLQHAHNPV W PWG+EAF KAK EDKPIFLS+GYSTCHWCHVMERESFE+ V +LNK+FV +K Sbjct: 58 TNRLAKEKSPYLLQHAHNPVDWFPWGKEAFAKAKKEDKPIFLSIGYSTCHWCHVMERESFENEEVGALLNKHFVCIK 134
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Match: A0A1Y3PTU1_9BACI (Thioredox_DsbH domain-containing protein n=1 Tax=Bacillus thermozeamaize TaxID=230954 RepID=A0A1Y3PTU1_9BACI) HSP 1 Score: 135 bits (341), Expect = 2.160e-39 Identity = 61/77 (79.22%), Postives = 65/77 (84.42%), Query Frame = 1 Query: 22 NRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGYSTCHWCHVMERESFESLAVAKILNKNFVAVKV 252 NRL E SPYLLQHA+NPV W PWG EAFTKAK EDKPIFLS+GYSTCHWCHVMERESFE VA ILN++FV VKV Sbjct: 10 NRLANEKSPYLLQHAYNPVDWYPWGNEAFTKAKEEDKPIFLSIGYSTCHWCHVMERESFEDPEVAGILNRHFVPVKV 86
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Match: A0A3B9UVU9_CLOSP (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Clostridium sp. TaxID=1506 RepID=A0A3B9UVU9_CLOSP) HSP 1 Score: 134 bits (336), Expect = 5.690e-39 Identity = 59/77 (76.62%), Postives = 65/77 (84.42%), Query Frame = 1 Query: 22 NRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGYSTCHWCHVMERESFESLAVAKILNKNFVAVKV 252 NRL E SPYLLQHAHNPV W PWGEEAF KA+ E+KPIFLS+GYSTCHWCHVME ESFE VAK+LN N+VA+KV Sbjct: 15 NRLINEKSPYLLQHAHNPVDWYPWGEEAFEKARRENKPIFLSIGYSTCHWCHVMEGESFEDEEVAKVLNDNYVAIKV 91
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Match: D7FVT0_ECTSI (Thioredox_DsbH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT0_ECTSI) HSP 1 Score: 146 bits (368), Expect = 5.850e-39 Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 1 Query: 22 NRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGYSTCHWCHVMERESFESLAVAKILNKNFVAVKV 252 NRL ETSPYLLQHAHNPV W+PWG+EAF++AK EDKPIFLSVGYSTCHWCHVMERESFES VAK+LN+NFV++KV Sbjct: 24 NRLAEETSPYLLQHAHNPVDWMPWGQEAFSRAKEEDKPIFLSVGYSTCHWCHVMERESFESQTVAKVLNENFVSIKV 100
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Match: A0A7X8CGC3_9DELT (DUF255 domain-containing protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7X8CGC3_9DELT) HSP 1 Score: 133 bits (334), Expect = 1.080e-38 Identity = 59/83 (71.08%), Postives = 67/83 (80.72%), Query Frame = 1 Query: 7 GAEP-TNRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGYSTCHWCHVMERESFESLAVAKILNKNFVAVKV 252 G +P TNRL E SPYLLQHA NPV W PWGEEAF KA EDKP+FLS+GY+TCHWCHVME ESFE + VAK+LN+N V +KV Sbjct: 11 GVKPMTNRLSQEKSPYLLQHADNPVDWYPWGEEAFKKANEEDKPVFLSIGYATCHWCHVMEHESFEDMEVAKLLNENAVCIKV 93
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Match: A0A2V5KY48_9BACT (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5KY48_9BACT) HSP 1 Score: 133 bits (334), Expect = 1.290e-38 Identity = 60/81 (74.07%), Postives = 66/81 (81.48%), Query Frame = 1 Query: 10 AEPTNRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGYSTCHWCHVMERESFESLAVAKILNKNFVAVKV 252 +E TNRL E SPYLLQHAHNPV W PWGEEAF KA+ E+KPIFLSVGYSTCHWCHVM ESFES VA I+N+ FV +KV Sbjct: 29 SEHTNRLAQEKSPYLLQHAHNPVDWYPWGEEAFDKARRENKPIFLSVGYSTCHWCHVMAHESFESEDVATIMNREFVNIKV 109
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Match: A0A0S7ET02_9TELE (SPT20 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7ET02_9TELE) HSP 1 Score: 134 bits (336), Expect = 1.840e-38 Identity = 58/77 (75.32%), Postives = 63/77 (81.82%), Query Frame = 1 Query: 19 TNRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGYSTCHWCHVMERESFESLAVAKILNKNFVAVK 249 TNRL E SPYLLQHAHNPV W PWG EAF KA+ EDKPIFLSVGYSTCHWCHVMERESF+ + KIL+ NFV +K Sbjct: 51 TNRLANERSPYLLQHAHNPVDWYPWGHEAFEKARREDKPIFLSVGYSTCHWCHVMERESFKDEEIGKILSDNFVCIK 127 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9679.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9679.1.1 >prot_C-tenellus_contig9679.1.1 ID=prot_C-tenellus_contig9679.1.1|Name=mRNA_C-tenellus_contig9679.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=83bp MGAEPTNRLGTETSPYLLQHAHNPVAWLPWGEEAFTKAKNEDKPIFLSVGback to top mRNA from alignment at C-tenellus_contig9679:141..619- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9679.1.1 ID=mRNA_C-tenellus_contig9679.1.1|Name=mRNA_C-tenellus_contig9679.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=479bp|location=Sequence derived from alignment at C-tenellus_contig9679:141..619- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9679:141..619- >mRNA_C-tenellus_contig9679.1.1 ID=mRNA_C-tenellus_contig9679.1.1|Name=mRNA_C-tenellus_contig9679.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=249bp|location=Sequence derived from alignment at C-tenellus_contig9679:141..619- (Choristocarpus tenellus KU2346)back to top |