mRNA_C-tenellus_contig9678.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Match: D7FP22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP22_ECTSI) HSP 1 Score: 194 bits (493), Expect = 1.640e-58 Identity = 90/127 (70.87%), Postives = 111/127 (87.40%), Query Frame = 1 Query: 1 KGYMGIIVVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKEYHQWIAPLINYTCKLVAMTIAWWIQRVISTLQSAIKGGLMFARYLLSFLSERTSMKVNHEDTFIDEALGWTLAFLGAYFQ 381 +GYMG++VVLKFRFA+ VALAVSIGNN+RPI A+ GP LAFVIP+EYHQWIAP+INY CK VAMT+AWWIQR+IST+QSAIKGGL+F+R L+ F+SE T +K++ + +F+DE LGWTLA GAYFQ Sbjct: 226 QGYMGVLVVLKFRFAKVVALAVSIGNNLRPIVAKIFGPALAFVIPREYHQWIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDHSFLDEVLGWTLAACGAYFQ 352
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Match: A0A835Z0S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S9_9STRA) HSP 1 Score: 160 bits (405), Expect = 8.540e-46 Identity = 78/127 (61.42%), Postives = 99/127 (77.95%), Query Frame = 1 Query: 1 KGYMGIIVVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKEYHQWIAPLINYTCKLVAMTIAWWIQRVISTLQSAIKGGLMFARYLLSFLSERTSMKVNHEDTFIDEALGWTLAFLGAYFQ 381 KG+ G++VVL+FRFAR +ALAVSI ++MRP+A+R L P LAF+IPKEYH+WI+ +IN C+ VA TIAW IQRV+ST+QSAIKGGLMFAR L+ FL E + + E T++DE LGW LA G Y Q Sbjct: 181 KGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHKWISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQ 307
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Match: A0A813D688_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D688_POLGL) HSP 1 Score: 134 bits (337), Expect = 1.580e-35 Identity = 67/127 (52.76%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 4 GYMGIIVVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKEYHQWIAPLINYTCKLVAMTIAWWIQRVISTLQSAIKGGLMFARYLLSFL-SERTSMKVNHEDTFIDEALGWTLAFLGAYFQ 381 GYMG+++ LK+ FART+A A SIG+N+RP+AA+ L P V P EY QW+ P IN CK VAM +AW +Q+V+S++QS+I GGL+ +R L +L S N EDT IDE LGW LA G YFQ Sbjct: 205 GYMGVVLALKYNFARTLAFAHSIGDNLRPVAAKLLAPTALSVTPPEYRQWVGPAINLGCKCVAMAVAWKLQQVVSSVQSSISGGLLASRCFLPYLMSSGLLASRNLEDTMIDEILGWGLASAGMYFQ 331
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Match: A0A813FS29_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FS29_POLGL) HSP 1 Score: 134 bits (337), Expect = 2.190e-34 Identity = 67/127 (52.76%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 4 GYMGIIVVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKEYHQWIAPLINYTCKLVAMTIAWWIQRVISTLQSAIKGGLMFARYLLSFL-SERTSMKVNHEDTFIDEALGWTLAFLGAYFQ 381 GYMG+++ LK+ FART+A A SIG+N+RP+AA+ L P V P EY QW+ P IN CK VAM +AW +Q+V+S++QS+I GGL+ +R L +L S N EDT IDE LGW LA G YFQ Sbjct: 35 GYMGVVLALKYNFARTLAFAHSIGDNLRPVAAKLLAPTALSVTPPEYRQWVGPAINLGCKCVAMAVAWKLQQVVSSVQSSISGGLLASRCFLPYLMSSGLLASRNLEDTMIDEILGWGLASAGMYFQ 161
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Match: A0A7S2XX56_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX56_9STRA) HSP 1 Score: 124 bits (311), Expect = 8.880e-34 Identity = 58/127 (45.67%), Postives = 92/127 (72.44%), Query Frame = 1 Query: 4 GYMGIIVVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKE-YHQWIAPLINYTCKLVAMTIAWWIQRVISTLQSAIKGGLMFARYLLSFLSERTSMKVNHEDTFIDEALGWTLAFLGAYFQ 381 ++ ++ L+ +FA+ +AL VSIGN +R A FLGP + ++P E Y +W+ ++++TCKL+A+TIAW++QRVI+ +QS I+GGLMF+R LL F ++ + + EDT+IDE +GW++A G YFQ Sbjct: 4 SWLAVMATLRIQFAQVIALGVSIGNILRVPAKGFLGPVIKGLLPVEDYKKWVDVVLDFTCKLIAITIAWFVQRVIAAVQSGIRGGLMFSRSLLKFALKKGYISFDDEDTYIDEVVGWSVAAFGIYFQ 130
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Match: A0A7S0TK47_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TK47_HEMAN) HSP 1 Score: 122 bits (306), Expect = 4.270e-33 Identity = 60/120 (50.00%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 22 VVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKEYHQWIAPLINYTCKLVAMTIAWWIQRVISTLQSAIKGGLMFARYLLSFLSERTSMKVNHEDTFIDEALGWTLAFLGAYFQ 381 V LK +FARTVALAVSI +N+R A L P LA +IP EYH W++P+I+ CK+V M +AW + R+I+T +++ GGLM AR + ++ +KV ED+ +DEA GWTL +GAYFQ Sbjct: 3 VALKVQFARTVALAVSISDNLRKPAGVLLTPVLAALIPPEYHHWVSPIISIACKVVGMWVAWLLARIIATCHASMIGGLMAARAAMGLANQMGWVKVTVEDSMLDEAAGWTLCVIGAYFQ 122
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Match: A0A6T8HJ76_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8HJ76_HEMAN) HSP 1 Score: 125 bits (315), Expect = 1.700e-32 Identity = 60/127 (47.24%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 1 KGYMGIIVVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKEYHQWIAPLINYTCKLVAMTIAWWIQRVISTLQSAIKGGLMFARYLLSFLSERTSMKVNHEDTFIDEALGWTLAFLGAYFQ 381 + + G++ LK +FARTVALAVSI +N+R A L P LA +IP EYH W++P+I+ CK+V M +AW + R+I+T +++ GGLM AR + ++ +KV ED+ +DEA GWTL +GAYFQ Sbjct: 181 QAFAGVLATLKVQFARTVALAVSISDNLRKPAGVLLTPVLAALIPPEYHHWVSPIISIACKVVGMWVAWLLARIIATCHASMIGGLMAARAAMGLANQMGWVKVTVEDSMLDEAAGWTLCVIGAYFQ 307
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Match: A0A7S1AZY3_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AZY3_NOCSC) HSP 1 Score: 126 bits (316), Expect = 1.880e-32 Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 1 Query: 4 GYMGIIVVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKEYHQWIAPLINYTCKLVAMTIAWWIQRVISTLQSAIKGGLMFARYLLSFLSERTSMKVNHEDTFIDEALGWTLAFLG 369 G++ + LK +FART++L VSIGN RP+A L P L ++PKEYH WI P+I+Y CK VA+++AWWIQR++S SAI+G LM R LL +E+ + T +DE GW LA G Sbjct: 227 GFLSVAATLKVQFARTISLGVSIGNVARPVAETVLVPPLTHLVPKEYHHWIRPVIDYICKAVAVSVAWWIQRILSAYHSAIRGALMCTRALLRIANEKNWYSTTEDKTMLDEYAGWVLAAFG 348
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Match: A0A7S2RLK5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK5_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.030e-31 Identity = 57/126 (45.24%), Postives = 90/126 (71.43%), Query Frame = 1 Query: 4 GYMGIIVVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKEYHQWIAPLINYTCKLVAMTIAWWIQRVISTLQSAIKGGLMFARYLLSFLSERTSMKVNHEDTFIDEALGWTLAFLGAYFQ 381 G++G+I VLK +FA+T+AL +IG+ + A R P L +IP++YH+WI L+ Y CK +A++IAW++QRVIS SAI+GGL+ +R +L+F++ R + N ++++DE +GW+LA G YFQ Sbjct: 229 GWVGVIAVLKIQFAKTIALGSAIGDFLYSPALRVATPVLVHLIPEDYHRWIPSLVLYVCKSIALSIAWYVQRVISAFHSAIRGGLLCSRGVLNFMNSRGIIDFNDTESYLDEIVGWSLAAAGFYFQ 354
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Match: A0A7S1REG4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1REG4_ALECA) HSP 1 Score: 122 bits (306), Expect = 2.830e-31 Identity = 57/126 (45.24%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 4 GYMGIIVVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKEYHQWIAPLINYTCKLVAMTIAWWIQRVISTLQSAIKGGLMFARYLLSFLSERTSMKVNHEDTFIDEALGWTLAFLGAYFQ 381 YMG++ VLKF+FART+ALA SI N+RP A+ LGP L V P +Y +WI+P ++ CKLVA +AW ++++ +T+QS GGL+ +R LL + ER + V ++T +DE +GW + G Y Q Sbjct: 158 AYMGVLTVLKFQFARTIALAESIAQNLRPAMAKVLGPTLVAVTPPDYRKWISPAVSLLCKLVAGAVAWKVKQLAATVQSGFCGGLIASRALLELMRERRLVSVADDETLLDEVVGWCVGACGIYVQ 283 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9678.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9678.1.1 >prot_C-tenellus_contig9678.1.1 ID=prot_C-tenellus_contig9678.1.1|Name=mRNA_C-tenellus_contig9678.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=124bp MGIIVVLKFRFARTVALAVSIGNNMRPIAARFLGPGLAFVIPKEYHQWIAback to top mRNA from alignment at C-tenellus_contig9678:125..3334- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9678.1.1 ID=mRNA_C-tenellus_contig9678.1.1|Name=mRNA_C-tenellus_contig9678.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3210bp|location=Sequence derived from alignment at C-tenellus_contig9678:125..3334- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9678:125..3334- >mRNA_C-tenellus_contig9678.1.1 ID=mRNA_C-tenellus_contig9678.1.1|Name=mRNA_C-tenellus_contig9678.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=372bp|location=Sequence derived from alignment at C-tenellus_contig9678:125..3334- (Choristocarpus tenellus KU2346)back to top |