mRNA_C-tenellus_contig9669.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9669.1.1
Unique NamemRNA_C-tenellus_contig9669.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Match: A0A6H5K292_9PHAE (SASA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K292_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 4.280e-84
Identity = 142/246 (57.72%), Postives = 171/246 (69.51%), Query Frame = 1
Query:   94 LCFSGNERWTPAQEPLHSDIDLRKRERCGFGPALVCARALLTLRAA--AGAPTRSTIGLVPCAIGGASLDEWQADYQGK-------SLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAPKGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFTVAITGTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLTTSGQVELGERLARQVFAS 804
            +CF+    W PA EPLH DIDLRK+ RCG GP+LVCA ALL LR A  + +P   TIGLVPCAIGGASLDEWQ +Y+GK       + H   QG     N PW YK G+ NLF AM+ R  +ALK AP+GSHL G+LWYQGETDA ++  AETY +RF+ L+   R  L  P+L  FTVA+TGTT RL  L++VR+AQ    S+TG+  VWV D FGLPMFPDGLHL T  QVELGER+A Q+F +
Sbjct:    1 MCFNARGDWGPAVEPLHRDIDLRKQHRCGVGPSLVCACALLELRKAYSSRSPQSPTIGLVPCAIGGASLDEWQKNYEGKVGDCELPARHGGVQG-----NQPWGYKPGSKNLFGAMSARVDEALKAAPEGSHLGGMLWYQGETDAANEDRAETYGDRFQTLIEDVRG-LGYPDLNIFTVAVTGTTARLPFLQQVRDAQLFAGSSTGIAGVWVTDTFGLPMFPDGLHLVTKAQVELGERMALQIFTA 240          
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Match: UPI000E703269 (probable carbohydrate esterase At4g34215 n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E703269)

HSP 1 Score: 163 bits (412), Expect = 2.310e-45
Identity = 102/272 (37.50%), Postives = 142/272 (52.21%), Query Frame = 1
Query:    4 DIFVLGGQSNMAGRGSGHLPPHYSGI-------DEDVLCFSGNERWTPAQEPLHSDIDLRKRERCGFGPALVCARALLTLRAAAGAPTRSTIGLVPCAIGGASLDEWQADYQGKSLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAPKGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFTVAITGTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLTTSGQVELGERLARQVF 798
            +IF+L GQSNMAGRG G +   + G+       ++ ++ F+ + +W  AQEPLH DID  K   CG GP +  A  LL + ++        IG VPCA+GG ++ EW    QG  L                     YNLF   +++++       +G  +R VLWYQGE+D +HQ  AE+Y    ++ + + RQ L +P L F  VA+       V +  VR+AQ  +     L NVW  DA GLP+ PDGLHLTT  QV LG+ LA   F
Sbjct:   39 NIFILAGQSNMAGRG-GVVNDVWDGVIPAECEPNQSIIRFNSHRKWVEAQEPLHVDIDFNKT--CGVGPGMAFANTLLQMDSS----NIGVIGFVPCAVGGTNISEWS---QGAPL---------------------YNLFIRRSKKSLL------EGGRIRAVLWYQGESDTVHQKDAESYGHNLKKFISNVRQDLHLPMLPFIQVALASGEGPFVGI--VRKAQLEI----DLPNVWTIDADGLPVGPDGLHLTTEAQVRLGQMLAEAFF 267          
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Match: I1NFX6_SOYBN (SASA domain-containing protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1NFX6_SOYBN)

HSP 1 Score: 161 bits (407), Expect = 5.690e-45
Identity = 103/272 (37.87%), Postives = 140/272 (51.47%), Query Frame = 1
Query:    7 IFVLGGQSNMAGRGS------------GHLPPHYSGIDEDVLCFSGNERWTPAQEPLHSDIDLRKRERCGFGPALVCARALLTLRAAAGAPTRSTIGLVPCAIGGASLDEWQADYQGKSLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAPKGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFTVAITGTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLTTSGQVELGERLA 786
            IF+L GQSNMAGRG             G +PP  S  D  +L  S   +W PA EPLH DID RK   CG GP +V A ALL  R   G      +GLVPCA+GG ++ EW                           A    L+  M +RA +++K     S ++ VLW+QGE+DA+++  A  Y    E L+ + RQ L++P+L    VA+   +    ++EKVREAQ+++     L NV   DA GL +  D LHLTT  Q++LG +LA
Sbjct:   18 IFILSGQSNMAGRGGVIRDANNRKRWDGVVPPE-SRSDPSILRLSATLQWEPANEPLHVDIDSRKA--CGVGPGMVFANALLRRRVVVG-----ELGLVPCAVGGTAMKEW---------------------------ARGEELYENMVKRAKESVKERENSSEIKAVLWFQGESDAINEEDAAAYKVNMETLIHNVRQDLNLPSLPIIQVALASGSD---YIEKVREAQKAI----DLPNVICVDAKGLQLMEDNLHLTTESQIQLGHKLA 247          
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Match: A0A0D6R729_ARACU (SASA domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R729_ARACU)

HSP 1 Score: 157 bits (397), Expect = 2.970e-43
Identity = 108/270 (40.00%), Postives = 140/270 (51.85%), Query Frame = 1
Query:    1 MDIFVLGGQSNMAGRGSGH-------LPPHYSGIDEDVLCFSGNERWTPAQEPLHSDIDLRKRERCGFGPALVCARALLTLRAAAGAPTRSTIGLVPCAIGGASLDEWQADYQGKSLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAPKGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFTVAIT-GTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLTTSGQVELGERLA 786
            MDIFVL GQSNMAGRG  H       +PP        +L  + + +W  A  PLH+DID+ K   CG GP L+ A  LL        P ++ IGL+PCAIGG ++ EW      K  H                      L+N M  R   AL    KG  LR +LWYQGE+DA+ + +A+ Y +  ERL+   R  L++PNL F  VAI  G       ++KVREAQ  +     + NV+  DA GLP+  D LHLTT  QV+LG+ LA
Sbjct:   16 MDIFVLSGQSNMAGRGGVHNSKWDNFIPPECQ-PHPSILRLNAHLKWEKAHPPLHADIDIHKT--CGVGPGLIFANTLLEKNYKD--PEKACIGLIPCAIGGTAIREWM-----KGSH----------------------LYNNMIHRTKAALA---KGGVLRAILWYQGESDAVEK-AADNYPKNLERLIHDIRSDLNLPNLLFIQVAINMGDPPYSKLVQKVREAQLGL----NIPNVYCVDAKGLPLKEDKLHLTTEAQVQLGKLLA 245          
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Match: UPI0010A4FAEA (probable carbohydrate esterase At4g34215 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4FAEA)

HSP 1 Score: 156 bits (395), Expect = 5.450e-43
Identity = 107/273 (39.19%), Postives = 142/273 (52.01%), Query Frame = 1
Query:    1 MDIFVLGGQSNMAGRGSGHLPPH----YSGI-------DEDVLCFSGNERWTPAQEPLHSDIDLRKRERCGFGPALVCARALLTLRAAAGAPTRSTIGLVPCAIGGASLDEWQADYQGKSLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAPKGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFTVAITGTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLTTSGQVELGERLA 786
            + IF+L GQSNMAGRG     PH    + GI       D  +L  S + RW PA EPLH+DID  K   CG GP +  A A+   R  AG      +GLVPCA+GG ++ EW                           A    L+  M ERA ++ K   KGS ++ +LWYQGE+DA+ ++ AE+Y    E+L+ + R+ L +P+L    VAI     R  ++EKVREAQ+S+     L  V   DA GL +  D LHLTT  QV+LG  LA
Sbjct:   32 LHIFILSGQSNMAGRGGVIRHPHNHKQWDGIVPPECRSDPSILRLSAHLRWEPAAEPLHADIDTGKV--CGVGPGMSFANAV---RQHAGG---GMMGLVPCAVGGTAIKEW---------------------------ARGEKLYEEMVERARESAKT--KGSEIKALLWYQGESDALTEHDAESYRVNMEKLIHNVREDLHLPSLPIIQVAIASGDER--YIEKVREAQKSI----DLPKVVCVDAKGLQLKEDNLHLTTEAQVQLGRMLA 261          
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Match: A0A443NSF0_9MAGN (Putative carbohydrate esterase n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NSF0_9MAGN)

HSP 1 Score: 155 bits (393), Expect = 5.480e-43
Identity = 103/267 (38.58%), Postives = 135/267 (50.56%), Query Frame = 1
Query:    7 IFVLGGQSNMAGRGS-------GHLPPHYSGIDEDVLCFSGNERWTPAQEPLHSDIDLRKRERCGFGPALVCARALLTLRAAAGAPTRSTIGLVPCAIGGASLDEWQADYQGKSLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAPKGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFTVAITGTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLTTSGQVELGERLA 786
            IF+L GQSNMAGRG        G LPP        +  FS +  W  A+EPLH+DID  K   CG GP +  ARALL        PT  ++GLVPCA+GG ++ EW+                           GT+ L+  M  RA + ++    G  +R +LWYQGE+D + ++ A+ Y    E+L+   R HL  P+L F  VA+    T  + +  VREAQ  +     L NV   DA GLP+  D LHLTT  QVELG  LA
Sbjct:   13 IFILSGQSNMAGRGGVSHKKWDGFLPPQCL-PHPAIHRFSAHSHWEEAREPLHADIDTSKT--CGVGPGMAFARALLHSD-----PTVGSMGLVPCAVGGTAIREWEP--------------------------GTH-LYTNMVRRAEECVR--ESGGEIRALLWYQGESDTLSRHDAQCYKANMEKLIRHVRDHLRSPSLPFIQVALASGDTHSIDM--VREAQLGI----NLPNVVCVDAKGLPLNEDNLHLTTEAQVELGNMLA 236          
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Match: A0A5N6QQ11_9ROSI (SASA domain-containing protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6QQ11_9ROSI)

HSP 1 Score: 155 bits (393), Expect = 6.130e-43
Identity = 100/267 (37.45%), Postives = 135/267 (50.56%), Query Frame = 1
Query:    7 IFVLGGQSNMAGRGSGHLPPHYSGI-------DEDVLCFSGNERWTPAQEPLHSDIDLRKRERCGFGPALVCARALLTLRAAAGAPTRSTIGLVPCAIGGASLDEWQADYQGKSLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAPKGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFTVAITGTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLTTSGQVELGERLA 786
            IF+L GQSNM+GRG      H+ G+       +  +L  S    W PA EPLH+DID +K   CG GP +  A    T+R   G      +GLVPCA+GG ++ EW                           A   +L+ +M  RA +++K    G  +R +LWYQGE+D +HQ+ AE Y    +R + + R+ L +P+L    VAI     R  ++EKVREAQ  +     L NV   DA GLP+  D LHLTT  QV LG  LA
Sbjct:   15 IFILSGQSNMSGRGGVTKHHHWDGVVPPECHPNASILRLSAKLHWDPAHEPLHADIDAKKV--CGVGPGMSFAN---TVRERVG-----VVGLVPCAVGGTAIKEW---------------------------ARGEHLYESMVARARESVK---GGGEIRALLWYQGESDTLHQHDAEAYQGNMDRFINNVREDLGLPSLPIIQVAIASGDER--YMEKVREAQFKI----NLPNVVCIDAKGLPLKEDNLHLTTEAQVRLGHMLA 235          
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Match: A0A5J9TR70_9POAL (SASA domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9TR70_9POAL)

HSP 1 Score: 155 bits (392), Expect = 6.360e-43
Identity = 104/267 (38.95%), Postives = 141/267 (52.81%), Query Frame = 1
Query:    1 MDIFVLGGQSNMAGRG----SGHLPPHYSGIDEDVLCFSGNERWTPAQEPLHSDIDLRKRERCGFGPALVCARALLTLRAAAGAPTRSTIGLVPCAIGGASLDEWQADYQGKSLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAPKGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFTVAI-TGTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLTTSGQVELGERLA 786
            M IFVL GQSNMAGRG     G +PP  +  D  +L  S   +W  A+EPLH+DID      CG GP +  ARA+L    A G    + +GLVPCAIGG ++ +W                           A    L+  M  R+    + A +   ++ VLWYQGE+D +  ++   Y E  E+L+ + R+ L +P L F  VA+ +GT T   ++EKVR AQ SV S+  L NV   DA GLP+  D +HL+T  QV+LGE LA
Sbjct:    1 MRIFVLSGQSNMAGRGVVSQDGVVPPECT-PDPRILRLSAALQWEEAREPLHADIDTTTT--CGVGPGMAFARAVLASLDAPGPGAEAGLGLVPCAIGGTAIRKW---------------------------ARGERLYEQMIARS----RAAAECGEIQAVLWYQGESDTISDHATAVYRENLEKLITNVREDLGMPQLPFIQVALASGTET---NIEKVRSAQYSVSSS--LPNVVTVDAMGLPLNEDNVHLSTGAQVKLGEMLA 228          
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Match: A0A4Y7IKN1_PAPSO (SASA domain-containing protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7IKN1_PAPSO)

HSP 1 Score: 155 bits (392), Expect = 2.450e-42
Identity = 102/272 (37.50%), Postives = 138/272 (50.74%), Query Frame = 1
Query:    4 DIFVLGGQSNMAGRGSGHLPPHYSGI-------DEDVLCFSGNERWTPAQEPLHSDIDLRKRERCGFGPALVCARALLTLRAAAGAPTRSTIGLVPCAIGGASLDEWQADYQGKSLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAPKGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFTVAITGTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLTTSGQVELGERLARQVF 798
            +IF+L GQSNMAGRG G +   + GI       +  ++ F+ + RW  AQEPLH DID  K   CG GP +V A  LL +       +R+TIGLVPCAIGG  + EW                            GT  L+N +  R++ +L    +G  + GVLWYQGE+D +    AE+Y +  ++ +   R  L +P L F  VA+  T      +  VR+AQ  +     L NVW  DA GLP+ PDG+HL+T  QV LG   A   F
Sbjct:   41 NIFILAGQSNMAGRG-GVVNDVWDGIIPSECKPNPSIIRFNSHHRWVEAQEPLHIDIDFNKT--CGVGPGMVFANTLLQMM-----DSRTTIGLVPCAIGGTRISEWDR--------------------------GT-RLYNMLITRSLLSLM---EGGRILGVLWYQGESDTVSPTDAESYGDNLKKFISDFRADLHLPLLPFIQVALASTEGPYKGI--VRKAQLEM----DLPNVWTVDADGLPLGPDGIHLSTRAQVRLGRMFAEGYF 268          
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Match: A0A200QZK9_9MAGN (SASA domain-containing protein n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QZK9_9MAGN)

HSP 1 Score: 154 bits (388), Expect = 3.610e-42
Identity = 101/268 (37.69%), Postives = 134/268 (50.00%), Query Frame = 1
Query:    7 IFVLGGQSNMAGRGS--------GHLPPHYSGIDEDVLCFSGNERWTPAQEPLHSDIDLRKRERCGFGPALVCARALLTLRAAAGAPTRSTIGLVPCAIGGASLDEWQADYQGKSLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAPKGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFTVAITGTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLTTSGQVELGERLA 786
            IF+L GQSNMAGRG         G LPP     D ++L F+ +  W  A EPLH DID +K   CG GP +  A+A+ T       P+   +GLVPCA+GG ++ EW+     K  H                      L+  M +RA  +++    G  +R VLWYQGE+D  HQ+ A+TY    ER + + R  L  P+L    VAI     +   +EKVRE Q  +     L NV   DA GL +  D LHLTT  Q++LG  LA
Sbjct:   16 IFILSGQSNMAGRGGVNSHKKWDGFLPPECQ-PDPNILRFNSHLNWVEAHEPLHVDIDTKKT--CGIGPGMPFAKAIRTHD-----PSIGVVGLVPCAVGGTAIKEWE-----KGCH----------------------LYENMVKRAKASVR---GGGQIRAVLWYQGESDTSHQHDADTYKVNMERFIRNVRSDLGFPSLPIIQVAIASGDEKW--MEKVREGQMGIE----LPNVVCVDAKGLGLKEDNLHLTTEAQLKLGNMLA 239          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9669.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K292_9PHAE4.280e-8457.72SASA domain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI000E7032692.310e-4537.50probable carbohydrate esterase At4g34215 n=2 Tax=P... [more]
I1NFX6_SOYBN5.690e-4537.87SASA domain-containing protein n=2 Tax=Glycine sub... [more]
A0A0D6R729_ARACU2.970e-4340.00SASA domain-containing protein n=1 Tax=Araucaria c... [more]
UPI0010A4FAEA5.450e-4339.19probable carbohydrate esterase At4g34215 n=1 Tax=P... [more]
A0A443NSF0_9MAGN5.480e-4338.58Putative carbohydrate esterase n=1 Tax=Cinnamomum ... [more]
A0A5N6QQ11_9ROSI6.130e-4337.45SASA domain-containing protein n=1 Tax=Carpinus fa... [more]
A0A5J9TR70_9POAL6.360e-4338.95SASA domain-containing protein n=1 Tax=Eragrostis ... [more]
A0A4Y7IKN1_PAPSO2.450e-4237.50SASA domain-containing protein n=1 Tax=Papaver som... [more]
A0A200QZK9_9MAGN3.610e-4237.69SASA domain-containing protein n=1 Tax=Macleaya co... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9669contigC-tenellus_contig9669:79..3663 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog3847.GLYMA20G26520.1
PFAMsSASA
Model size804
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons7
Evalue9.33e-46
EggNOG OGs28M03@1|root,2QQJB@2759|Eukaryota,37S53@33090|Viridiplantae,3GATT@35493|Streptophyta,4JINR@91835|fabids
DescriptionCarbohydrate esterase
Cds size804
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9669.1.1prot_C-tenellus_contig9669.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9669 79..3663 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790194.7471516-CDS-C-tenellus_contig9669:78..1201680790194.7471516-CDS-C-tenellus_contig9669:78..120Choristocarpus tenellus KU2346CDSC-tenellus_contig9669 79..120 -
1680790194.7573261-CDS-C-tenellus_contig9669:834..9511680790194.7573261-CDS-C-tenellus_contig9669:834..951Choristocarpus tenellus KU2346CDSC-tenellus_contig9669 835..951 -
1680790194.770016-CDS-C-tenellus_contig9669:1877..20361680790194.770016-CDS-C-tenellus_contig9669:1877..2036Choristocarpus tenellus KU2346CDSC-tenellus_contig9669 1878..2036 -
1680790194.7797642-CDS-C-tenellus_contig9669:2473..25931680790194.7797642-CDS-C-tenellus_contig9669:2473..2593Choristocarpus tenellus KU2346CDSC-tenellus_contig9669 2474..2593 -
1680790194.7916021-CDS-C-tenellus_contig9669:2873..30441680790194.7916021-CDS-C-tenellus_contig9669:2873..3044Choristocarpus tenellus KU2346CDSC-tenellus_contig9669 2874..3044 -
1680790194.8023052-CDS-C-tenellus_contig9669:3283..33871680790194.8023052-CDS-C-tenellus_contig9669:3283..3387Choristocarpus tenellus KU2346CDSC-tenellus_contig9669 3284..3387 -
1680790194.816995-CDS-C-tenellus_contig9669:3572..36631680790194.816995-CDS-C-tenellus_contig9669:3572..3663Choristocarpus tenellus KU2346CDSC-tenellus_contig9669 3573..3663 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9669.1.1

>prot_C-tenellus_contig9669.1.1 ID=prot_C-tenellus_contig9669.1.1|Name=mRNA_C-tenellus_contig9669.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=268bp
MDIFVLGGQSNMAGRGSGHLPPHYSGIDEDVLCFSGNERWTPAQEPLHSD
IDLRKRERCGFGPALVCARALLTLRAAAGAPTRSTIGLVPCAIGGASLDE
WQADYQGKSLHNHPQGSDSKTNGPWNYKAGTYNLFNAMTERAMQALKLAP
KGSHLRGVLWYQGETDAMHQYSAETYSERFERLVLSTRQHLSIPNLRFFT
VAITGTTTRLVHLEKVREAQESVMSTTGLDNVWVADAFGLPMFPDGLHLT
TSGQVELGERLARQVFAS
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mRNA from alignment at C-tenellus_contig9669:79..3663-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9669.1.1 ID=mRNA_C-tenellus_contig9669.1.1|Name=mRNA_C-tenellus_contig9669.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3585bp|location=Sequence derived from alignment at C-tenellus_contig9669:79..3663- (Choristocarpus tenellus KU2346)
ATGGATATTTTTGTGTTGGGGGGGCAGTCGAATATGGCAGGAAGGGGCTC CGGCCACTTGCCACCACACTACTCTGGCATTGACGAAGATGGTAAGCAAT GTCCAAGGCAGTGAGTGATAATAGTGTGCAACCAACTAGATTGTTGCACC AATGCAATATTGACGGAGTCGCCACGTTCTCTGTCTTCTGATCTGTATAC GCTCGTGGATACGTGGCATCCCTGCTGTCTCCTACCGAACAAACGGCGCC TCATTTTTTGCATCCTCGTTGCAAAGTGTTATGCTTTTCTGGGAATGAGC GCTGGACACCCGCACAAGAACCACTTCACTCGGACATAGATCTGCGCAAG CGGGAGAGATGTGGTTTTGGCCCCGCCTTGGTAAGCAACGAGATCGAGAG AGGGATCAAAGATGCTGTGCAATTAATGAGCTGGTGGATTGGAGGACGTG AGCTTCCGTTATTAGCATGATTCAGTTATTGCACCAAGGAACCATTCAAT ATGTGCACGGATCCCAGCGCCAGAGCTACCGCATGTGGGAGGTTCTGTGC AGTATGTGCAATAATCGTGTTTACTAACTCAAGAAAGGTTACCCCGTCTA AACATCTTCTGACTTCAAGGTGTGCGCACGTGCCTTGCTGACTCTACGGG CTGCTGCTGGTGCCCCAACCAGATCGACAATTGGCCTAGTACCATGCGCG ATTGGGGGCGCCTCTCTGGACGAGTGGCAGGCAGACTATCAAGGCAAATC CTTGCATAACCACCCACAAGGCTCTGACTCCAAGACCAATGTTATTAGTA GTTAGAGCTGTGATAGACTGCCATGCCGATATTGGTCGTAGGTATTAGGC TACATCTATGACAGAAGACATCAATTATTGTTCCCTGCAACTTTACTCCT CGCAAACACATTGCTTGACTTTTGTGCTGGCCCCCTTATTTACTGAATCG AAGCTTCGATAGACCTTTGATGTCGTACTAAATGATCGACATTCCTATCC CTGAATGTTAACCTCAGGGCCCATAGGCGACTGTGAGGGCAAGGTGGTAC CCAACGCACAAGTGACAGAGGGCCCATGGAATTACAAGGCTGGGACATAT AACCTGTTCAACGCCATGACCGAAAGAGCCATGCAGGCACTAAAGTTGGC GCCCAAAGGAAGCCACCTCAGAGGTGTACTTTGGTATCAGGTGCGATAAT CTTAATGGAATCATACATAGTGCATTCATTGGGTAGGAAAACAAGGCATA CTAGAGCAATGGGTGGAGGTGTGGGAGCATTGTTGCCCCTATACGTATCC TTGATCTCCGCTGAATATGTTGTATGTTGTTATGGTGAAGTTTTTGGTCC TTAGACATTCTGGGTACACCTTGCAGTATTCCCAGTACTTTGAAGCATTG CACAAAATGGAAATGAGACAATTTAACAACATTGACTTTGTGTCATAGAG TCAGAGTCTGCCAACTGTACTCAGAGCCGCTCACCTAAGAGAATGTTCAA GTTAATTCAGCAATGGAATGACAGCTCTCACCTATTATGAGAGTTGGGGT AGGCAACCATGTATGTTCTTCAAGCAGTATGTTTGTGCTTGATGAGGCTC CACTTGTAGGATTACCCTGTTTGACAGGGAGAAACAGATGCAATGCATCA ATACTCAGCAGAAACCTACAGTGAGCGTTTCGAAAGACTGGTGCTCTCCA CTCGGCAACATTTATCCATCCCAAACCTTCGGTTCTTTACTGTGGCCATC ACTGGGACCACCACTCGCCTGGTGCACCTTGAGAAGGTAAGATTGTGCAC TATGTGACATCATTTTCCACCTTAGATTAGTAAGGTAGAGAACAAGCTAC TATAGCTCACAGTATCTCAGATGAAGGGTACAGGATATCACTTCCAACAT TTGTAGGCTGATATATATATATTTGTCTTGGAGATAAGTGCATGCTTGTC CTATCACGGACGTGGTCTGGAGTTATGCTCTGAGATGGAACGCATGTCCA AGTATTCCTTGTTAGAAAGTATGTTCTGACATATCTTGGGGTATCTTGAT ATAGTTAGATCTAGAGATACCAATGTTTGGTGGGGTGCATGCACTCTCAT GGGCTCCAAATACACGTTGAAGAAACTGTATGGTCTACACTTTGAAGTTA CCAGTGTACCTGCTAGAGAGTGTGCACTAGACAAAGGTTTATCACCTTGT GTTCGTTTTTTAATAATTGGAACGAACCATACTGATTTATTTTTTTTGGA AGTGCAACATTGTACTGTGTTCCACCTTTTTACCTTGCAACTTCTTAGCT GTAAATGGTCAGTTGATGATTAAATAGCACCCTCGCCCACCTCTTGACAA CCAACAGTCACTGCAACTATTGCAACACATGAATTACTGCTCTTCCCAAA TTGGTCCCACCCAAACTACTTGACAAATGCTTAATGATTCAAAGTCAGAA GTAGGTACAATATTTGGACATTGTGTAACATGAGGTGATATGTTTCAAGT CGATTTCTCCAGGCATATAAAAATAAAATGATATAATATTTGCGCAAAGA TCCCTCTGCATCCATTTATGAGGAGGGTTCCGGTATAAGGTTCATGAGTA AATTTTACTTTGTCACAAAATTCCCTACCTGTACAAGAGCTTGTGCTCAT ATATGATAGACCATTGCTAGCCCCAAATGTAACTGACATGTTATGCCACA TTTTCTCTCTAGGTCCGAGAAGCTCAGGAGAGTGTAATGTCTACTACTGG CCTGGACAATGTGTGGGTGGCGGATGCTTTTGGGCTGCCCATGTTTCCTG ATGGATTACATCTCACGACTTCGGGTCAGGTAAGGGCTATCCTGGGGTTA ACATAGTACAATGTAGCTTCTGCAAGGGAGGAAATCACTGTGAACCAAGG TAAGAGTTCTACTATTTTTTTTCATGCTTTATTTGGAAGGGAAAAAATTC AATGTATTGCACGCATTAATATGACTCTATGAATAGTATGCATTTTGGTG AGTGAAGGCTCTTGGAAGCATCACTATAAATGCCCTCTGAGGAAACAATT GTAGCTCCGCTGACATTTGCACTTCAAGTGACTGCTAAATAGATGCAGTG GTCTCTTTTTGAGTATGCTATTAGATCATTTTGTACCTACTTCTACCTAC CTCTAGTAACTGCTTTGGATGAATCTGTACCGCCCTTATACAAGTCAATT CATGTCAATATATGTCAATATATGCATCTTGTACATGCTACAAGAGCATA GTTTATCTTCATGGCCTGTTCCTTTACTGGACTACACATTTGTTTTAGAT CCAGAGAAGAACATGCGGTATGCTTGGTGCTACCTATCTGCCCAAACATT TACTATGTTAGGTAACATTCCTCCCCTGCATAGACAGCAGTACTATTGAT ATCCAAAATATTTATTAATGCCACAGTGATTTATGTCCTCTTTGCTGTAA CTGCCATGGCCTTACCTAATGGTTTTGTTGAGTACCACTTTCACACCCTT CGCATTGTGACCATGACAACACACAATTTCCAATATGACACAGGTGGAGT TGGGAGAACGCCTGGCTCGACAGGTTTTTGCGTCT
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Coding sequence (CDS) from alignment at C-tenellus_contig9669:79..3663-

>mRNA_C-tenellus_contig9669.1.1 ID=mRNA_C-tenellus_contig9669.1.1|Name=mRNA_C-tenellus_contig9669.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=804bp|location=Sequence derived from alignment at C-tenellus_contig9669:79..3663- (Choristocarpus tenellus KU2346)
ATGGATATTTTTGTGTTGGGGGGGCAGTCGAATATGGCAGGAAGGGGCTC
CGGCCACTTGCCACCACACTACTCTGGCATTGACGAAGATGTGTTATGCT
TTTCTGGGAATGAGCGCTGGACACCCGCACAAGAACCACTTCACTCGGAC
ATAGATCTGCGCAAGCGGGAGAGATGTGGTTTTGGCCCCGCCTTGGTGTG
CGCACGTGCCTTGCTGACTCTACGGGCTGCTGCTGGTGCCCCAACCAGAT
CGACAATTGGCCTAGTACCATGCGCGATTGGGGGCGCCTCTCTGGACGAG
TGGCAGGCAGACTATCAAGGCAAATCCTTGCATAACCACCCACAAGGCTC
TGACTCCAAGACCAATGGCCCATGGAATTACAAGGCTGGGACATATAACC
TGTTCAACGCCATGACCGAAAGAGCCATGCAGGCACTAAAGTTGGCGCCC
AAAGGAAGCCACCTCAGAGGTGTACTTTGGTATCAGGGAGAAACAGATGC
AATGCATCAATACTCAGCAGAAACCTACAGTGAGCGTTTCGAAAGACTGG
TGCTCTCCACTCGGCAACATTTATCCATCCCAAACCTTCGGTTCTTTACT
GTGGCCATCACTGGGACCACCACTCGCCTGGTGCACCTTGAGAAGGTCCG
AGAAGCTCAGGAGAGTGTAATGTCTACTACTGGCCTGGACAATGTGTGGG
TGGCGGATGCTTTTGGGCTGCCCATGTTTCCTGATGGATTACATCTCACG
ACTTCGGGTCAGGTGGAGTTGGGAGAACGCCTGGCTCGACAGGTTTTTGC
GTCT
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