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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 4038 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 2607 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790176.5974853-UTR-C-tenellus_contig944:7320..7383 | 1680790176.5974853-UTR-C-tenellus_contig944:7320..7383 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig944 7321..7383 + |
| 1680790176.6479135-UTR-C-tenellus_contig944:11701..13069 | 1680790176.6479135-UTR-C-tenellus_contig944:11701..13069 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig944 11702..13069 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790176.6106722-CDS-C-tenellus_contig944:7383..8049 | 1680790176.6106722-CDS-C-tenellus_contig944:7383..8049 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig944 7384..8049 + |
| 1680790176.6237478-CDS-C-tenellus_contig944:8238..8597 | 1680790176.6237478-CDS-C-tenellus_contig944:8238..8597 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig944 8239..8597 + |
| 1680790176.6380208-CDS-C-tenellus_contig944:10119..11701 | 1680790176.6380208-CDS-C-tenellus_contig944:10119..11701 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig944 10120..11701 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig944.5.1 >prot_C-tenellus_contig944.5.1 ID=prot_C-tenellus_contig944.5.1|Name=mRNA_C-tenellus_contig944.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=869bp
MMTEHLLPVADDISDLSSDESSILGNGADDTETDLRGKDWVGFDTDYFDL
SNTVSKEDAPSMCTAPNQLPGRFSSASTSFAVKSGNGEEPGLSEMGSRHE
VGSVEKTNLHLPVSGDDVELYYLLACDHCRKESIKMGVVHCVGRPRPHLS
PRVVVSQVKRKCPRYKLRLSPRQDVEIEFEDEGGDSRGRLLKWKDEYKVN
APCAECAGKGLEICRQRGHALLELRITDVRKRVRTSSRRPTKVHMNGKGK
KVPSRKGGLFPESDVHIVTSRRGKTVERRWIKFGEVCYYLPSNIFFANGG
KTLRVEVQLGRYLVNGERCSKGGGSTYLASLPATVDDILLLRSFLERVIP
PRGKNIGGSPSTCGLHPIIVGQVYRHWSNLHSRENGDKHKFGAEELVSIS
APTSLPRNGKGNAGVRGGGDTPDDDIPTVSLTVAELESLRDSKQNLVQTV
LNALREDPNVLRGELEVLSFPESSPRQHPSEAALPSCKAVGEVKEGCERK
DVKDSEEQEDNVEVDDTAIWPQVCDRVCDEVGKTSVAVLVKEDRTCWEAG
SNTLSASAEESTVSEEDVVLLDHGLVRVAGEDARVTGEDAQVAGEDTQVE
GRREDEVIEEDGKATDAGNPGGGNLLLHHKSSRVDVSRSLLPRERENATC
NGKVTKDRKRIQRSGQKRKTGPGEDAANSTASGGNRGECEEEDSATWSPE
SHFHLKCSKSDLSSSLFCGNNASCDRKEDKGERVREESRQKRKTRHREDA
VNSAAGCEAVGKFTEEDSSTTGCESNGNSVMHFTSQAKSMLRQALERNEQ
VYLESVLRLEVEKEELRERKERLMMDEENLRMKEKLGLDVYQSSKALCLQ
RLRSLNGQEEDVLEEPMQ* back to topmRNA from alignment at C-tenellus_contig944:7321..13069+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-tenellus_contig944.5.1 ID=mRNA_C-tenellus_contig944.5.1|Name=mRNA_C-tenellus_contig944.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5749bp|location=Sequence derived from alignment at C-tenellus_contig944:7321..13069+ (Choristocarpus tenellus KU2346)
CTCTCATTTCAAATCCCAAAGACAAAATCGAAGGAACTCAAGCGCGAGGT
TGTATACCACACTATGATGACCGAACATTTGTTGCCAGTAGCGGATGACA
TCTCTGACCTTAGCTCCGACGAATCTTCTATACTTGGAAATGGCGCTGAT
GATACCGAAACAGATTTAAGAGGAAAGGACTGGGTGGGCTTTGATACTGA
CTACTTTGACCTATCCAATACAGTCTCCAAGGAAGATGCGCCGTCCATGT
GTACAGCGCCCAATCAATTGCCTGGTAGGTTTTCTTCGGCATCCACTTCT
TTCGCTGTTAAGTCCGGCAATGGTGAGGAACCGGGCTTGAGCGAAATGGG
CTCAAGGCATGAGGTTGGTAGCGTCGAGAAGACAAACCTCCATCTTCCAG
TCTCAGGCGATGACGTCGAGTTATACTATCTCCTGGCATGTGATCACTGC
AGGAAGGAATCAATCAAAATGGGTGTCGTGCATTGTGTCGGACGTCCGCG
CCCTCATCTCTCTCCGAGAGTGGTCGTATCGCAGGTGAAGAGAAAATGTC
CTCGGTACAAGCTTAGGCTCTCACCCAGGCAAGACGTGGAGATTGAATTT
GAAGATGAAGGTGGTGACAGTAGGGGCCGGCTTCTGAAGTGGAAGGACGA
GTACAAAGTCAACGCCCCATGTGCAGAATGCGCTGGTAAAGGGTTGGAAA
TCTGCCGTCAGAGAGGGCATGCTCTATTGGTGAGCTATCGTCATCATTAG
TGTATATGGATGGGAGTCTCAGCTTGACTCTCTTTTCAAGGAATCACTAC
GATTAACCTCTATCCCAAAATGTGCAAAGCAGTATTCAAATAACTCTTAC
GTAGAACGTGCTCATTAGGACGTACCCTTCCCTGTTCTCCCAACTCTCTC
AATTGGGACATCAACTAGGAATTGCGCATCACTGATGTGAGGAAACGGGT
TCGTACATCGTCCAGAAGACCCACAAAAGTGCACATGAACGGTAAGGGAA
AGAAGGTTCCCTCTAGAAAAGGAGGATTATTTCCGGAAAGTGATGTGCAT
ATTGTCACCAGTAGGCGGGGCAAGACTGTAGAGCGACGGTGGATCAAATT
TGGTGAAGTGTGTTACTACCTACCTAGTAATATATTCTTTGCTAATGGTG
GGAAGACATTGAGGGTGGAGGTGCAGCTTGGAAGATACTTAGTCAATGGA
GAAAGATGTTCAAAAGGTGGAGGAAGTACATACCTGGCTTCTTTGCCAGC
CACTGTGGACGACATCCTTTTGCTCAGGTAAGTGACCTCGTTCTTCTGTC
TGCTGTGAAAGGTTCGATTTCATCTGTTACCATTTCGAGAGTATGGAGAA
GGCCTTTTCTAGCCGCATATATGACCCTCTTTTACACTTGAGCTCATTCT
GTACTGCAGCAATTAACATTCTGTGATTTGCCTGCCCTACTAACTGGCAG
TGGTTTGTATTTGGAAATGTTTATGCTTGTGCTGATTGGCTCATCAGTGT
GGGTGGTTTCACCAATCATGAGAAGTTGCAATTTGTTGCAGGTAAATGAT
AAATAATGTTATAATTGGATGACTATAATGTACCCTGCATATATTTTCTA
AAAGTGGTGAATTACCACAGGTTATTGTTAGTTACATATGATCACCCACG
ATTTAGCCTTGACACCATTTTATATAGCTCTAATTTAAGCATAAGGGTCA
GGTATCCCCTATCTTCTCTGTGCTTTGGAATAAGTAAACCATTTTTTACA
CATAACCAAGCGTTGTTTCTGTTCTTTGAGGCTGTCATGTCGAAGGGAGC
ACGCTATTTACCCATGACAGAAATGGTATCATGGATAAACTGTTGTGGCT
TACTGGCCACATGCGAGCCATGTGTTTTTGGACAGTGCAGTAAAGGGGGT
AAACGTCAACCCGATGCAGAGGAGGGGTCCACACTGCACTGTTTGTGGTG
TTGTTTGGCACAGTATTCGTTGAAATTTGAGATTTTGGGAGCCTGTTATT
CTCTTGTTCTGCCCACAGGGTGGCAAAGGCTGAGTGAAACACCCTCCCTC
GTAACGTGTTTTTTGGACACGTGTGATTTGAAGTTGACCTTCATTTAGAT
GGAGTGATGATAGGTTAGACGATGAAAAACACCAAACCACCATCTTTTTC
CTCACTTTAGCACTATATCCTAGAGTGCAATAATACCATCATTACTAGTG
CTTGCTGGCAGCCTAGACTTGAATGAAGAATGAGTCAAAAGGAGCATGAT
ACTCACCCTAAATAGCCCCCTCACCTGCCAGAAGGGTCTGTGTGATCATT
CATTATTAGGCGGCCACTGACGTTGTCTCTGTTTTTCCTTTGTAGTCCGG
GCTTACTGTGCTTGTTTTTGGGCTTCTGGTGTGCGCTTGCTTTATGTATC
GAGTTGGATGTGAGTTCAGCGGGGAATAGGGGAGGACGCAATATGTGCAG
TGTGTGTTGCGCATCTAACTGCTGTCCATCACATCTTGAAGTATCTCTGC
GTGGTTTTATCGTGAGTTGTTATATCAGCATGTGTTGAAACTTACAAATG
AGCTCGTCGTTTTCTTGTTAACAGACATCTGCGCCTTCAATCAACCATTT
GAACAGTATCGCTAGACATCCTGATTGCTGGAGCATTTACGTAGCATTCT
TTTTTTTTTTGTTCTGGCTTGATCAGTACTTTATCGAAATCAAATCCACA
AGCTCAAGGAAGCCTACAGCATATTACTATACTTTCAAGATATGTCATCC
TTTTCTTACTCCTTGGTACACTTGATGTCTTCTTTTCCTCATGGCACAGA
TCATTCCTTGAAAGAGTCATTCCGCCCCGAGGTAAGAACATTGGTGGAAG
CCCCAGCACCTGTGGCTTGCATCCAATTATTGTAGGTCAAGTTTATCGCC
ACTGGAGCAATCTGCACTCAAGAGAGAATGGGGACAAGCACAAGTTCGGA
GCAGAGGAACTTGTCTCGATATCTGCCCCTACCTCTTTGCCGAGGAATGG
AAAGGGGAACGCAGGCGTTCGGGGTGGTGGTGATACTCCTGACGATGATA
TCCCTACTGTCTCCCTGACAGTAGCAGAGCTTGAGTCCTTGAGAGACAGC
AAGCAAAACCTGGTGCAAACCGTGTTGAATGCCCTTCGGGAAGATCCTAA
TGTGCTTAGAGGTGAGCTGGAGGTCTTGTCTTTCCCGGAGTCTTCCCCCA
GACAGCACCCTTCTGAGGCAGCATTGCCATCTTGCAAGGCTGTGGGGGAG
GTGAAGGAAGGCTGCGAAAGGAAGGATGTTAAGGATAGTGAAGAGCAAGA
AGACAATGTCGAAGTTGATGATACAGCTATTTGGCCTCAGGTATGTGACA
GGGTTTGTGATGAGGTTGGGAAAACGTCGGTCGCTGTTCTCGTCAAGGAG
GATAGAACGTGTTGGGAAGCTGGCAGTAACACGCTCAGTGCTTCGGCCGA
GGAGAGCACTGTGTCGGAGGAGGATGTGGTCCTTTTGGATCATGGTTTAG
TGCGAGTGGCAGGAGAGGATGCACGAGTGACAGGGGAGGACGCACAAGTG
GCAGGAGAGGACACACAGGTTGAGGGCCGCAGAGAAGATGAAGTCATTGA
AGAGGATGGGAAAGCAACAGATGCGGGTAACCCTGGTGGTGGCAATCTGC
TTTTGCATCACAAGTCCTCAAGAGTAGACGTGTCAAGGTCACTATTACCC
CGAGAGCGGGAGAATGCAACTTGTAATGGCAAGGTAACCAAGGACAGGAA
GAGGATACAGCGAAGCGGTCAAAAGAGGAAGACTGGACCTGGTGAGGACG
CGGCAAATTCCACCGCCTCAGGTGGGAACAGAGGTGAGTGCGAGGAGGAG
GATTCTGCCACCTGGTCACCTGAGTCACATTTCCACCTCAAATGCTCAAA
ATCGGACTTGTCAAGCTCATTATTTTGCGGTAACAATGCGAGTTGTGATC
GCAAGGAAGACAAGGGTGAGCGGGTGAGAGAGGAGAGTAGGCAAAAGAGG
AAGACACGGCATCGGGAGGACGCTGTGAATTCTGCTGCTGGATGTGAGGC
TGTAGGTAAGTTTACGGAGGAAGACTCATCCACAACGGGATGTGAGTCAA
ATGGAAATTCAGTTATGCATTTCACTTCCCAGGCTAAGAGCATGTTGAGA
CAGGCGCTGGAGAGGAATGAACAGGTCTACTTGGAGTCTGTATTGAGACT
AGAGGTCGAGAAAGAGGAACTTCGGGAAAGGAAGGAGAGGCTGATGATGG
ACGAAGAAAATCTTAGGATGAAAGAGAAGCTTGGCCTTGATGTATACCAG
TCAAGCAAGGCGCTGTGCCTGCAGCGACTTAGGAGTCTTAATGGTCAGGA
GGAAGATGTGCTGGAAGAACCAATGCAGTGAGAGTAATACTGCAAGCGTA
GTGTTGTGGATATACCACTAGCGCTGATGCTCGTAGAAAATGTATATACT
CCAGAGTACTTTGTATGTATGCAGCCTTGACTGTTTGCACTGCTACCCAG
TAAGGTGTGACTCTGTTGATGGGAGTGTTGACTCACCTCCCTTCCATATT
TGCTCGCTATGTTGCTGGGGAAAGGCTACTGTGTTGTGCACTGCATTATG
TGCTGCCTAAAGTTGCTGCGAACCTGGTTAAAGTTAGGGTGGTGGGTGGG
GTGGCGGAGAGCTAACTACTAGATTTTGTCTTTTTGAGGGTGCGTTAGAT
ATCCTCTGCCCACTGAGTTGGGATAGTATTCCAAAAATAGGTGACCATGA
ATAGAGGAGAGGAGAGAGTGTCAAGAGGATCCCCTTAGTATGGAGGTCCC
GAATTCAACAGGTGGCATGTTGTTGGAGGGTGTCAGATACTAGTGTGCTG
GGGTGTATTTGTTGATGGAGATTTTGTTGTCTTGGGAATATATTTGTGTT
GATCTCTCTATATAATGGGAAGTCAAGTTAGTGGGGATGATTTTATCTCA
GTATGCTTTTTCCGTTTTTCATCATATTTTTTCCGGAATAGATGTATGTG
GTGTGTAAGATTACACCCCAAAGCACAATATGTATGTAAACACTCCATTG
GTTAGATGATACATTTGTCTTCCAGCTTTTCTGATACATGCTGCTCCTGT
GAATGTAATGTCCTTGGAGAACACACATTGCGTGTATATCACTAAAGGAT
ACACAACCTGAGCAGAGCACTTCAGAAACGCAACTGTTATGGAGTACTAT
GTTGCAATATATGTATAAGTGAAGTGAAAATTTCATAGCCCTTGAAGTAG
GTTACACCAGATGAAGTGGTATAGCATGTGTGTTGGTTGCGTTGTTGCTT
TGTTGCATTACTATTGCAAGGAGCACTGCCTTGTGGTATGCGGGTTTGTA
AAATCTATGTCCTCACCTTGAAGATGGGGGGTTACACATTTTGGTAAATA
AAGTGTGCCGAATTTGTGACTGATTAGTTTTGGTTGAGTCTTCACAGTTT
TAAAAATCATTTGCTAGGGATATATGGAGGTGAACCCTTAGTGTAGAGCT
CTGAATTGCCAAGCATTATCAACTATTCACACGCAAGACTTGGAGGGAAA
CAAACACATGCGACAAGCAAGGACTGTTCTTCTTTTCCATCACAAGAGCA
AAGTCAGTGTTTAGCACCTCATTACATTTCCCCATTCTTGATCATGTGTC
TTGTTCATGATGAGTGATGCCAACTCTAAGCGACATAGTGGGGGGGTCTG
TGGGGTGAATGCATCGTTTCAACTCAATGTATAGTTGGATTGTCCTAGA back to topCoding sequence (CDS) from alignment at C-tenellus_contig944:7321..13069+ >mRNA_C-tenellus_contig944.5.1 ID=mRNA_C-tenellus_contig944.5.1|Name=mRNA_C-tenellus_contig944.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=2607bp|location=Sequence derived from alignment at C-tenellus_contig944:7321..13069+ (Choristocarpus tenellus KU2346)
ATGATGACCGAACATTTGTTGCCAGTAGCGGATGACATCTCTGACCTTAG
CTCCGACGAATCTTCTATACTTGGAAATGGCGCTGATGATACCGAAACAG
ATTTAAGAGGAAAGGACTGGGTGGGCTTTGATACTGACTACTTTGACCTA
TCCAATACAGTCTCCAAGGAAGATGCGCCGTCCATGTGTACAGCGCCCAA
TCAATTGCCTGGTAGGTTTTCTTCGGCATCCACTTCTTTCGCTGTTAAGT
CCGGCAATGGTGAGGAACCGGGCTTGAGCGAAATGGGCTCAAGGCATGAG
GTTGGTAGCGTCGAGAAGACAAACCTCCATCTTCCAGTCTCAGGCGATGA
CGTCGAGTTATACTATCTCCTGGCATGTGATCACTGCAGGAAGGAATCAA
TCAAAATGGGTGTCGTGCATTGTGTCGGACGTCCGCGCCCTCATCTCTCT
CCGAGAGTGGTCGTATCGCAGGTGAAGAGAAAATGTCCTCGGTACAAGCT
TAGGCTCTCACCCAGGCAAGACGTGGAGATTGAATTTGAAGATGAAGGTG
GTGACAGTAGGGGCCGGCTTCTGAAGTGGAAGGACGAGTACAAAGTCAAC
GCCCCATGTGCAGAATGCGCTGGTAAAGGGTTGGAAATCTGCCGTCAGAG
AGGGCATGCTCTATTGGAATTGCGCATCACTGATGTGAGGAAACGGGTTC
GTACATCGTCCAGAAGACCCACAAAAGTGCACATGAACGGTAAGGGAAAG
AAGGTTCCCTCTAGAAAAGGAGGATTATTTCCGGAAAGTGATGTGCATAT
TGTCACCAGTAGGCGGGGCAAGACTGTAGAGCGACGGTGGATCAAATTTG
GTGAAGTGTGTTACTACCTACCTAGTAATATATTCTTTGCTAATGGTGGG
AAGACATTGAGGGTGGAGGTGCAGCTTGGAAGATACTTAGTCAATGGAGA
AAGATGTTCAAAAGGTGGAGGAAGTACATACCTGGCTTCTTTGCCAGCCA
CTGTGGACGACATCCTTTTGCTCAGATCATTCCTTGAAAGAGTCATTCCG
CCCCGAGGTAAGAACATTGGTGGAAGCCCCAGCACCTGTGGCTTGCATCC
AATTATTGTAGGTCAAGTTTATCGCCACTGGAGCAATCTGCACTCAAGAG
AGAATGGGGACAAGCACAAGTTCGGAGCAGAGGAACTTGTCTCGATATCT
GCCCCTACCTCTTTGCCGAGGAATGGAAAGGGGAACGCAGGCGTTCGGGG
TGGTGGTGATACTCCTGACGATGATATCCCTACTGTCTCCCTGACAGTAG
CAGAGCTTGAGTCCTTGAGAGACAGCAAGCAAAACCTGGTGCAAACCGTG
TTGAATGCCCTTCGGGAAGATCCTAATGTGCTTAGAGGTGAGCTGGAGGT
CTTGTCTTTCCCGGAGTCTTCCCCCAGACAGCACCCTTCTGAGGCAGCAT
TGCCATCTTGCAAGGCTGTGGGGGAGGTGAAGGAAGGCTGCGAAAGGAAG
GATGTTAAGGATAGTGAAGAGCAAGAAGACAATGTCGAAGTTGATGATAC
AGCTATTTGGCCTCAGGTATGTGACAGGGTTTGTGATGAGGTTGGGAAAA
CGTCGGTCGCTGTTCTCGTCAAGGAGGATAGAACGTGTTGGGAAGCTGGC
AGTAACACGCTCAGTGCTTCGGCCGAGGAGAGCACTGTGTCGGAGGAGGA
TGTGGTCCTTTTGGATCATGGTTTAGTGCGAGTGGCAGGAGAGGATGCAC
GAGTGACAGGGGAGGACGCACAAGTGGCAGGAGAGGACACACAGGTTGAG
GGCCGCAGAGAAGATGAAGTCATTGAAGAGGATGGGAAAGCAACAGATGC
GGGTAACCCTGGTGGTGGCAATCTGCTTTTGCATCACAAGTCCTCAAGAG
TAGACGTGTCAAGGTCACTATTACCCCGAGAGCGGGAGAATGCAACTTGT
AATGGCAAGGTAACCAAGGACAGGAAGAGGATACAGCGAAGCGGTCAAAA
GAGGAAGACTGGACCTGGTGAGGACGCGGCAAATTCCACCGCCTCAGGTG
GGAACAGAGGTGAGTGCGAGGAGGAGGATTCTGCCACCTGGTCACCTGAG
TCACATTTCCACCTCAAATGCTCAAAATCGGACTTGTCAAGCTCATTATT
TTGCGGTAACAATGCGAGTTGTGATCGCAAGGAAGACAAGGGTGAGCGGG
TGAGAGAGGAGAGTAGGCAAAAGAGGAAGACACGGCATCGGGAGGACGCT
GTGAATTCTGCTGCTGGATGTGAGGCTGTAGGTAAGTTTACGGAGGAAGA
CTCATCCACAACGGGATGTGAGTCAAATGGAAATTCAGTTATGCATTTCA
CTTCCCAGGCTAAGAGCATGTTGAGACAGGCGCTGGAGAGGAATGAACAG
GTCTACTTGGAGTCTGTATTGAGACTAGAGGTCGAGAAAGAGGAACTTCG
GGAAAGGAAGGAGAGGCTGATGATGGACGAAGAAAATCTTAGGATGAAAG
AGAAGCTTGGCCTTGATGTATACCAGTCAAGCAAGGCGCTGTGCCTGCAG
CGACTTAGGAGTCTTAATGGTCAGGAGGAAGATGTGCTGGAAGAACCAAT
GCAGTGA back to top
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