mRNA_C-tenellus_contig944.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Match: UPI000900EE06 (uncharacterized protein LOC109134360 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI000900EE06) HSP 1 Score: 60.1 bits (144), Expect = 1.640e-9 Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 4 LGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYGEVLGFKGDSVFEIPHLSKEKTEMAGKL 234 LGFFN+IQ LK+ + + + LV+ +AF Y + H+W +L V E L KG++ + IPH+ K+ E G+L Sbjct: 28 LGFFNAIQTLKDQIAPRSVKQLVKAVNKAFDNYDPKLCNHIWLTLQQVMKETLIVKGNNNYHIPHMGKKSLERRGEL 104
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 61.6 bits (148), Expect = 2.850e-9 Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 4 LGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYGEVLGFKGDSVFEIPHLSKEKTEMAGKL 234 LGFF SIQ L+ + T E+LV ++F YP E L V+ + E++ FKGD+ ++IPH+ K++ E G L Sbjct: 263 LGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTL 339
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Match: UPI00053FDE92 (uncharacterized protein LOC104888825 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FDE92) HSP 1 Score: 60.1 bits (144), Expect = 1.080e-8 Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 4 LGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYGEVLGFKGDSVFEIPHLSKEKTEMAGKL 234 LGFFN+IQ LK+ + + + LV+ +AF Y + H+W +L V E L KG++ + IPH+ K+ E G+L Sbjct: 468 LGFFNAIQTLKDQIAPRSVKQLVKAVNKAFDNYDPKLCNHIWLTLQQVMKETLIVKGNNNYHIPHMGKKSLERRGEL 544
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Match: UPI00053FB287 (uncharacterized protein LOC104908611 n=4 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FB287) HSP 1 Score: 59.3 bits (142), Expect = 1.590e-8 Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 4 LGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYGEVLGFKGDSVFEIPHLSKEKTEMAGKL 234 LGFFN+IQ LK+ + + + LV+ +AF Y + H+W +L V E L KG++ + IPH+ K+ E G+L Sbjct: 172 LGFFNAIQTLKDQLAPRSVKQLVKAVNKAFDNYDPKLCNHIWLTLQQVMKETLIVKGNNNYHIPHMGKKSLERRGEL 248
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 58.5 bits (140), Expect = 3.690e-8 Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 4 LGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYGEVLGFKGDSVFEIPHLSKEKTEMAGKLLPN 243 LGFF +IQ L+ N ++LVE +A+ +TL V+ SL ++L F+GD+ +++PH++K++ E G L PN Sbjct: 337 LGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTGGL-PN 415
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Match: UPI00053F7B42 (uncharacterized protein LOC104898721 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F7B42) HSP 1 Score: 56.6 bits (135), Expect = 1.130e-7 Identity = 27/77 (35.06%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 4 LGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYGEVLGFKGDSVFEIPHLSKEKTEMAGKL 234 LGFFN+IQ LK+ + + + LV+ +A+ Y + H+W +L V E L KG++ + IPH+ K+ + G+L Sbjct: 120 LGFFNAIQTLKDQLACRSVKHLVKAVNKAYDNYDPKLCNHIWLTLQQVIKETLIVKGNNNYHIPHMGKKSLKRRGEL 196
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Match: UPI000901F817 (uncharacterized protein LOC109136021 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI000901F817) HSP 1 Score: 56.2 bits (134), Expect = 1.980e-7 Identity = 27/77 (35.06%), Postives = 44/77 (57.14%), Query Frame = 1 Query: 4 LGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYGEVLGFKGDSVFEIPHLSKEKTEMAGKL 234 LGFFN+IQ L++ + + LV+ +A+ Y + H+W +L V E L KG++ + IPH+ K+ E G+L Sbjct: 158 LGFFNAIQTLEDQIAPRTVKHLVKAMNKAYDKYDPKLCNHIWLTLQQVMKETLIVKGNNNYHIPHMGKKALERRGEL 234
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Match: UPI001C25248E (uncharacterized protein LOC121754342 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25248E) HSP 1 Score: 54.7 bits (130), Expect = 6.020e-7 Identity = 25/72 (34.72%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 4 LGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYGEVLGFKGDSVFEIPHLSKEKTE 219 LGFF +IQ L+ + ++LVE +A+ +TL V+ SL ++L FKGD+ +++PH++K++ E Sbjct: 130 LGFFRAIQSLQHEKPCRGVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILKFKGDNHYKLPHMNKDRLE 201
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Match: UPI00053F965D (uncharacterized protein LOC104886745 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F965D) HSP 1 Score: 53.5 bits (127), Expect = 2.120e-6 Identity = 28/78 (35.90%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 4 LGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYGEVLGFKGDS-VFEIPHLSKEKTEMAGKL 234 LGFFN+IQ LK+ + + + LV+ +A+ Y + H+W +L V E L KG++ + IPH+ K+ E G+L Sbjct: 277 LGFFNAIQILKDQLAPRSVKHLVKAVNKAYDNYDPKLCNHIWPTLQQVMKETLIVKGNNNYYHIPHMEKKSLERRGEL 354
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Match: UPI001C2541F4 (uncharacterized protein LOC121800620 n=4 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2541F4) HSP 1 Score: 49.3 bits (116), Expect = 6.700e-5 Identity = 22/72 (30.56%), Postives = 42/72 (58.33%), Query Frame = 1 Query: 4 LGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYGEVLGFKGDSVFEIPHLSKEKTE 219 LGFF +IQ L+ + N + L+E ++ +TL V+ SL E++ F+G++ +++PH++K + E Sbjct: 336 LGFFRAIQTLQHEKPCNNVDTLLENVCSSYEELSPQTLNKVFLSLQACLTEIMVFRGENNYKVPHINKARLE 407 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig944.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig944.3.1 >prot_C-tenellus_contig944.3.1 ID=prot_C-tenellus_contig944.3.1|Name=mRNA_C-tenellus_contig944.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=81bp NLGFFNSIQQLKEDVGVTNTEDLVETTMEAFSVYPQETLEHVWQSLFVVYback to top mRNA from alignment at C-tenellus_contig944:2640..2882+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig944.3.1 ID=mRNA_C-tenellus_contig944.3.1|Name=mRNA_C-tenellus_contig944.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=243bp|location=Sequence derived from alignment at C-tenellus_contig944:2640..2882+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig944:2640..2882+ >mRNA_C-tenellus_contig944.3.1 ID=mRNA_C-tenellus_contig944.3.1|Name=mRNA_C-tenellus_contig944.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=243bp|location=Sequence derived from alignment at C-tenellus_contig944:2640..2882+ (Choristocarpus tenellus KU2346)back to top |