mRNA_C-tenellus_contig9419.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Match: D8LNE9_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE9_ECTSI) HSP 1 Score: 358 bits (919), Expect = 1.160e-113 Identity = 175/259 (67.57%), Postives = 209/259 (80.69%), Query Frame = 3 Query: 315 TPAGLTLEGVYKRVKIEAQGLEDGAVALDSKDVDYGVEIVKVKMPREPSLGIQLVEVARGADGRGLVLVSGLEPGGRAEVSGKVEIGDTLSWVGVEPNRMIRVEALDWDQTVNALSQYTGDSEITLVLKRLIKREMLDVVFKLPNGDRTEAILAGSNLRGEMIRLGVPVYDPKTKRYDQPYATGNCGGEGICGTCFVEVQQGANLLSPADEEELMLMAQGVLPTRWRLSCKTIVGMNNDSGTVTLKAVPQAEWREAQSQ 1091 +P+GLTL+GVYKR+ +E Q DG V L+SKD DY +E+VKV+M R+PSLG+QL EVARG DGRGLVLV+GLEPGG AE SGK+ +GDTL G+E + M RVEALDWDQTV+ L + +SEI LV+KRL+KRE ++V F+LP+G R I AGSNLRGEMIRL VPVYDP+TKR+DQPYATGNC GEG CGTCFVEVQQGA+LL+ D+EELML+++G LP RWRLSCK IVG N +GTV LKAVPQAEWR Q Sbjct: 80 SPSGLTLDGVYKRLTLETQSRADGVVGLESKDTDYAIEVVKVQMQRKPSLGMQLEEVARGGDGRGLVLVAGLEPGGNAEASGKICVGDTLCSAGIEGD-MSRVEALDWDQTVSVLGSFAEESEIVLVIKRLVKRESINVQFELPSGSRDHEIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEWRSQARQ 337
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Match: A0A7S4DIM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIM7_HETAK) HSP 1 Score: 246 bits (628), Expect = 2.560e-71 Identity = 126/250 (50.40%), Postives = 166/250 (66.40%), Query Frame = 3 Query: 324 GLTLEGVYKRVKIEAQGLEDGAVALDSKDVDYGVEIVKVKMPREPSLGIQLVEVARGADGRGLVLVSGLEPGGRAEVSGKVEIGDTLSWVGVEPNRMIRVEALDWDQTVNALSQYTGDSEITLVLKRLIKREMLDVVFKLPNGDRTEA-ILAGSNLRGEMIRLGVPVYDPKTKRYDQPYATGNCGGEGICGTCFVEVQQGANLLSPADEEELMLMAQGVLPTRWRLSCKTIVGMNNDSGTVTLKAVPQAE 1070 GLTLE + K+ L++G LD++DV+YG+EI K ++ RE LG+ L E+ G DGRGLVLV + GG A +G+ +GD LSWVG EP M RVE LD+D T+ AL +Y +TLV KRL++R+ L+V P+G + +LAGS LRGEM+R G+ VYDP KR+DQPY TGNCGGEG+CGTC V V +G LLS D E M++ + P R+RLSC+TIVG+ N G V LK++P E Sbjct: 66 GLTLEEIAGLFKMSVFDLDEGLYGLDTRDVNYGIEIAKARVSREGGLGLGLSEMMAGRDGRGLVLVEDVAEGGNAATTGQFRVGDALSWVGEEPGDMTRVEGLDFDGTLAALGKYADREAVTLVAKRLVRRQPLEVTLIQPDGSEAKLEMLAGSVLRGEMLRQGLQVYDPSQKRFDQPYVTGNCGGEGLCGTCLVAVLEGKELLSLPDRVEAMVLEKR--PARYRLSCRTIVGVTNQPGKVVLKSMPTLE 313
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Match: A0A836CRA8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA8_9STRA) HSP 1 Score: 239 bits (610), Expect = 4.030e-69 Identity = 132/267 (49.44%), Postives = 173/267 (64.79%), Query Frame = 3 Query: 309 PLTPAGLTLEGVYKRVKIEAQGLEDGAVALDSKDVDYGVEIVKVKMPREPSLGIQLVEVARGADGRGLVLVSGLEPGGRAEVSGKVEIGDTLSWVGVEPNR-MIRVEALDWDQTVNALSQYTGDSEITLVLKRLIKREMLDVVFKLPN-----------GDRTEAILAGSNLRGEMIRLGVPVYDPKTKRYDQPYATGNCGGEGICGTCFVEVQQGANLLSPADEEELMLMAQGVLPTRWRLSCKTIVGMNNDSGTVTLKAVPQAEW 1073 P+ G++LEG+YKR+KIE L++G + L+S+D +G+EIV RGLVL+ + GG A SG + GDTL++VG E R M RVE D+D TV AL +Y +EITLVLKRL++R+ L+V F+ P G + +LAGSNLR EMIR +PVYD KT+R+DQPYATGNCGGEGICGTCFVEVQ+GA LLSP D E M+M LP RWRLSC+T+VG N++G V L+++PQ+ + Sbjct: 36 PVNADGVSLEGIYKRLKIEILDLDEGIIGLESRDPAFGIEIV-----------------------RGLVLIG--DVGGNAAESGLINTGDTLTYVGNEAARDMTRVEGQDYDTTVAALGKYADLAEITLVLKRLVQRKTLEVTFETPTAYAEDGTAVEWGGQGVQMLAGSNLRSEMIRRDIPVYDAKTRRFDQPYATGNCGGEGICGTCFVEVQEGAELLSPPDGLENMVMRN--LPRRWRLSCRTVVGGKNEAGQVRLRSIPQSAY 275
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Match: A0A4D9CWU2_9STRA (PDZ domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWU2_9STRA) HSP 1 Score: 224 bits (570), Expect = 2.150e-63 Identity = 128/268 (47.76%), Postives = 163/268 (60.82%), Query Frame = 3 Query: 318 PAGLTLEGVYKRVKIEAQGLEDGAVALDSKDVDYGVEIVKVKMPR-EPSLGIQLVEVARGADGRGLVLVSGLEPGGRAEVS----GKVEIGDTLSWVGVEPNRMIRVEALDWDQTVNALSQY--TGDSEITLVLKRLIKREMLDVVFKLPNGDRTEA-----------ILAGSNLRGEMIRLGVPVYDPKTKRYDQPYATGNCGGEGICGTCFVEVQQGANLLSPADEEELMLMAQGVLPTRWRLSCKTIVGMNNDSGTVTLKAVPQA 1067 P LTLE + ++K E L+ GA L+SKDV Y VEI KV +P E +G+ L E+ RG DGRG VLVS L P G A + GK+ +GD + ++G EP M+R E LD++QT+ AL ++ TG ITLVLKRL+ R LDV G E+ +LAGS LR E++R G+PVY T R+DQPY TGNCGGEGICGTC V+V +G LL+ DE E M+ + WRLSC+ IVG N GTV K +PQA Sbjct: 12 PPPLTLEEISNKIKFEITDLDAGAYGLESKDVAYAVEIAKVDIPLGEGGIGLGLEELRRGQDGRGCVLVSSLPPEGNAAQAAGDDGKIRVGDMICYLGQEPRGMVRTEGLDFEQTMGALRRFLETGAPAITLVLKRLVFRASLDVSLSYTPGPDEESQGRKAWTQTLPMLAGSQLRKELLRAGLPVYSQDTLRFDQPYVTGNCGGEGICGTCLVQVLEGKELLNEKDEVEAMVTRKWGA-ANWRLSCRVIVGATNTPGTVRFKLMPQA 278
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Match: A0A7S2V297_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V297_9STRA) HSP 1 Score: 198 bits (503), Expect = 5.140e-55 Identity = 106/205 (51.71%), Postives = 141/205 (68.78%), Query Frame = 3 Query: 504 RGLVLVSGLEPGGRAEVSGKVEIGDTLSWVG---VEPNRMIRVEALDWD---QTVNALSQYTGDSEITLVLKRLIKREMLDVVFKLPNG-DRTEAILAGSNLRGEMIRLGVP--VYDPKTKRYDQPYATGNCGGEGICGTCFVEVQQGANLLSPADEEELMLMAQGVLPTRWRLSCKTIVGMNNDSGTVTLKAVPQAEWREAQSQ 1091 RGLVLV L PGG A +S K+ +GDTL V ++ +EA+D D Q + ALS + ++ L+ KRL+KREM++V LP+G ++T +L+GSNLRGEMIR G+P +YDP+TKRYDQP+ TGNCGGEGICGTC +EV G +LS AD E ML+ P RWRLSC+T VG +N SG+V ++AVPQ E RE++ + Sbjct: 1 RGLVLVKDLAPGGNAALSAKIRVGDTLCRAADPTVGARSVVSLEAVDLDGTLQNLGALSFASRQKQLVLIFKRLVKREMVNVKIALPDGGEKTLQMLSGSNLRGEMIRQGLPEYIYDPETKRYDQPFITGNCGGEGICGTCLIEVMDGPEMLSEADNLENMLLENQ--PIRWRLSCRTFVGPDNKSGSVKVRAVPQKEMRESRKK 203
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Match: A0A7R9YBT6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBT6_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.840e-49 Identity = 105/255 (41.18%), Postives = 156/255 (61.18%), Query Frame = 3 Query: 327 LTLEGVYKRVKIEAQGLEDGAVALDSKDVDYGVEIVKVKMPREPSLGIQLVEVARGAD---GRGLVLVSGLEPGGRAEVSG-KVEIGDTLSWVGVEPNRMIRVEALDWDQTVNALSQYT-GDSEITLVLKRLIKREMLDVVFKLPNGDRTEAIL-AGSNLRGEMIRLGVPVYDPKTKRYDQPYATGNCGGEGICGTCFVEVQQGANLLSPADEEELMLMAQGVLPTRWRLSCKTIVGMNNDSGTVTLKAVPQAEW 1073 L++E + R+ I+ ++DG L +D YG+++VK + R+PSLGI L E+ +D R LVLV GLE G A G +E+GD ++ + I E D+D ++ + G E+TLV+ RL++R M+ + ++LPNGDR+ AGSNLRG ++ GV +YD +T+R+D PYATG+C GEG+CGTC V V G +LLSPAD E L+ +G P WR +C+ VG +N GTV ++ PQ+ + Sbjct: 58 LSVEDIADRLAIQVFDMDDGKFGLSCRDPAYGLKVVKTSVKRKPSLGIVLNEMVDASDPSADRALVLVGGLE--GNAAAEGVDLEVGDVITAIADGSGGYISTEGRDYDFLIDTIVGVDPGAEELTLVVNRLVERAMVTINYELPNGDRSSVQAPAGSNLRGIFLQEGVRLYDERTRRFDMPYATGDCAGEGLCGTCLVNVWSGEDLLSPADRNEA-LICKG-RPMGWRAACRVFVGADNQEGTVEVRLQPQSRF 308
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Match: A0A7S3P6U2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6U2_9STRA) HSP 1 Score: 179 bits (454), Expect = 6.590e-46 Identity = 100/257 (38.91%), Postives = 152/257 (59.14%), Query Frame = 3 Query: 342 VYKRVKIEAQGLEDGAVALDSKDVDYGVEIVKVKMP---REPSLGIQLVEVARGADGRGLVLVSGLEPGGRAEVSGKVEIGDTLSWVGVEPNRMI-RVEALDWDQTVNALSQYT-----GDSEITLVLKRLIKREMLDVVFKLPNGDRTEA-ILAGSNLRGEMIRLGVPVYDPKTKRYDQPYATGNCGGEGICGTCFVEVQQGANLLSPAD-EEELMLMAQGVLPTRWRLSCKTIVGMNNDSGTVTLKAVPQAEWRE 1079 + +R+K+E LE+G DS+D YG+E+++ ++P PSLG+ L E+A DGRGLVLVS + + S + +GD ++ V + R L++D+TV A+ GD + L L RL+KR + V P + T LAG NLR ++R + +Y+ KTKR+D PYATG+C GEG+CGTC V V +G +LL+P D EEL+ + P WR SC+T+VG NN+ GT+ ++ PQ+++ + Sbjct: 125 IARRLKLEIFDLEEGIFGFDSQDPVYGLEVIQTEIPLSSENPSLGLVLTEMAGNKDGRGLVLVSEVTGNAKNARSSPILVGDVITGVRTSDGSLRERTTGLNYDRTVEAVGDVKEAALKGDGTLHLELNRLVKRATIQVQVVQPGKNVTTIEALAGENLRRLLLRKDIRLYNRKTKRFDMPYATGDCAGEGLCGTCLVAVNEGMDLLNPKDGAEELITRGR---PLSWRASCRTVVGSNNEGGTIQVRVQPQSDFED 378
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Match: B7G5I1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5I1_PHATC) HSP 1 Score: 165 bits (418), Expect = 7.390e-42 Identity = 102/257 (39.69%), Postives = 146/257 (56.81%), Query Frame = 3 Query: 348 KRVKIEAQGLEDGAVALDSKDVDYGVEIVKVKMP-REPSLGIQLVEVARGADGRGLVLVSGLEPGGRAEVSGKVEIGDTLSWVGVEPNRMI---RVEALDWDQTVNALS---QYTGDSEITLVLKRLIKREMLDVVFKLPNGDRTEAI---LAGSNLRGEMIRLGVPVYDPKTKRYDQPYATGNCGGEGICGTCFVEVQQGANLLSPADEEELMLMAQGVLPTRWRLSCKTIVGMNNDSGTVTLKAVPQAEWREAQS 1088 ++ K+E L++G DSKD YG+E+V + LG+ L E+A DGRGLV+VS + + +GDT++ GV N + RV A ++D+TV A+ + + D ITL L RLIKR L V ++ +G + LAG NLR +R + +YD +T+R+DQP+ TGNCGG+G+CGTC V V QG +LL+P D E+ + P WR SC+T VG NN GT+ + PQ+E E S Sbjct: 54 QKFKLEIFDLDEGLFGFDSKDNRYGLEVVHTNIDVGNDGLGLVLTEMAGSPDGRGLVMVSKITGNAAKANPQAIHVGDTIT--GVMANDGVLKERVTAFNYDKTVEAIGRAKESSTDGTITLELNRLIKR--LPVRVEIDDGSGHVQVIEALAGENLRRMFMRKQLKLYDERTRRFDQPFNTGNCGGDGVCGTCLVNVLQGMDLLNPKDSHEVFITKGR--PPSWRASCRTTVGFNNVGGTLRISLHPQSELPEELS 304
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Match: A0A8J2SE60_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SE60_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.200e-35 Identity = 97/256 (37.89%), Postives = 143/256 (55.86%), Query Frame = 3 Query: 330 TLEGVYKRVKI---EAQGLEDGAVALDSKDV-DYGVEIVK-VKMPREPSLGIQLVEVARGADGRGLVLVSGLEPGGRAEVSGKVEIGDTLSWVGVEPNRMIRVEALDWDQTVNALSQYTGDSEITLVLKRLIKREMLDVVFKLPNGDRTEAIL---AGSNLRGEMIRLGVPVYDPKTKRYDQPYATGNCGGEGICGTCFVEVQQGANLLSPADEEELMLMAQGVLPTRWRLSCKTIVG---MNNDSGTVTLKAVPQ 1064 TL VY + + E+ ++ G + +D YG E V + + R P LGI+L+EVA +G G+V+V G G A S ++ GD +++VG VEA WD TV+AL + GD ++ LV+KRL+KR ++DV K PNG++ + +L AG NLR M+ V + DP +R+D G+CG G C TC V V GA +LSP E +M P R+RL+CKT VG N ++G +T++ P+ Sbjct: 44 TLNEVYAQWGVCVEESTAIKVGGLLFSPQDPRTYGTETVDGIILTRSPGLGIELLEVANNNEGVGIVVVDGTVAGSSAADSA-LQKGDVIAFVGQPGGPFESVEAKTWDDTVDALGRVEGD-QVELVVKRLVKRPVVDVTVKHPNGEQPDQVLRLFAGENLRRAMLTRRVALNDPLARRFDDNDVGGDCGSGGACCTCAVAVLAGAEMLSPQKASERQIMKTLRQP-RFRLACKTAVGEGLQNGETGKMTIRINPR 296
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Match: R1DEK5_EMIHU (PDZ domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DEK5_EMIHU) HSP 1 Score: 125 bits (315), Expect = 1.980e-28 Identity = 80/238 (33.61%), Postives = 121/238 (50.84%), Query Frame = 3 Query: 381 DGAVALDSKDVDYGVEIVKVKMPRE---PSLGIQLVEVARGADGRGLVLVSGLEPGGRAE-VSGKVEIGDTLSWVGVE--PNRMIRVEALDWDQTVNALSQYTGDSEITLVLKRLIKREMLDVVFKLPNGDRTE----AILAGSNLRGEMIRLGVPVYDPKTKRYDQPYATGNCGGEGICGTCFVEVQQGANLLSPADEEELMLMAQGVLPTRWRLSCKTIVGMNNDSGTVTLKAVPQ 1064 DGA+ L + + ++V V +PR PSLG+ L E+A D G+V V GL GG E + + GD L E P + +E L +D V LS + + + +KRL+++ V + P + E + G+NLR M+ GV + DP +R+D TG+CGGEG C TC VEV +G + LS +E+ ++A+ RWRL+CK +G + LK P+ Sbjct: 18 DGALTLAAAEAGTEAQVVTVTIPRSDDAPSLGLLLDEIATSGDA-GIVAVEGLVEGGNGEKATAPLLPGDALVAAAEEGKPTTGVSLEGLPFDSVVERLSSLSSAVGVVVSVKRLVRKPRATVTVRFPEAEGREDARMTLYQGANLRRAMLSSGVALNDPLARRFDAGVGTGDCGGEGTCCTCAVEVAKGLDALSEPSSQEVQMVAKRF--PRWRLACKATLGPIEQDEEIVLKVQPR 252 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9419.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9419.2.2 >prot_C-tenellus_contig9419.2.2 ID=prot_C-tenellus_contig9419.2.2|Name=mRNA_C-tenellus_contig9419.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=347bp MTHTSTVRKSHQCMVLLLLSVCLSTWSSNAFVTIPNHRLILTPTLRWPATback to top mRNA from alignment at C-tenellus_contig9419:781..4477+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9419.2.2 ID=mRNA_C-tenellus_contig9419.2.2|Name=mRNA_C-tenellus_contig9419.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3697bp|location=Sequence derived from alignment at C-tenellus_contig9419:781..4477+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9419:781..4477+ >mRNA_C-tenellus_contig9419.2.2 ID=mRNA_C-tenellus_contig9419.2.2|Name=mRNA_C-tenellus_contig9419.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1041bp|location=Sequence derived from alignment at C-tenellus_contig9419:781..4477+ (Choristocarpus tenellus KU2346)back to top |