mRNA_C-tenellus_contig9324.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Match: D7G2V0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V0_ECTSI) HSP 1 Score: 224 bits (570), Expect = 2.160e-70 Identity = 108/174 (62.07%), Postives = 133/174 (76.44%), Query Frame = 1 Query: 1 RDQAEPTVNTNFFNTVSFTESMMPLVRRSTAGRVVNVASRFGHLSIIPDGTLRRKFESPTLSKEELSSLMAKFVEDVQNDRHRQEGWASTCYGMSKLGLIAYTKVVARIEQESGSGVLVNACCPGYCDTDMTSHRGSSPAEVGALTPFMLSQLP---DGGFTGGFFAEERPLVW 513 +DQAEPT+ TNFF+T +FTE M+PLVR+S AGRVVNVAS GHLSI+ R F +P L+KE LS++MA+FV DV+ RH+ GW +TCYGMSKLG+IAYTKV AR+E+E+GS V +NACCPGYCDTDMTSHRG+ E GA TPFML+Q+ +GG TG FF +E W Sbjct: 131 KDQAEPTLKTNFFDTAAFTEKMLPLVRKSDAGRVVNVASMAGHLSILGSQDRRNAFTNPALTKERLSAMMAQFVGDVKAGRHQGGGWPNTCYGMSKLGVIAYTKVAARVEREAGSTVTINACCPGYCDTDMTSHRGTLTPEEGARTPFMLTQMKSVDEGGLTGEFFRKEALAEW 304
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Match: A0A7S0XB88_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XB88_9STRA) HSP 1 Score: 181 bits (458), Expect = 9.980e-54 Identity = 86/169 (50.89%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 7 QAEPTVNTNFFNTVSFTESMMPLVRRSTAGRVVNVASRFGHLSIIPDGTLRRKFESPTLSKEELSSLMAKFVEDVQNDRHRQEGWASTCYGMSKLGLIAYTKVVARIEQESGSGVLVNACCPGYCDTDMTSHRGSSPAEVGALTPFMLSQLPDGGFTGGFFAEERPLVW 513 QAEPT+ TN+F T+S T+ M+PL++ ST+ R+VNVAS+ G L I+P ++ F S +L+ +EL+ M +FV DV+ND+ ++ W +CYG SKLG+IA TKV+AR + +L+NACCPGYC TDM+SHRG+ AE GA TPF L+ L G TG FF +E+ L W Sbjct: 120 QAEPTIKTNYFGTLSLTKLMLPLLQNSTSPRIVNVASQAGALGILPSNERKKFFTSESLTVDELTEAMNQFVNDVKNDKLKENDWPGSCYGTSKLGVIALTKVLARNYPD----ILINACCPGYCQTDMSSHRGTRTAENGARTPFYLATLTAGSVTGKFFYDEKELAW 284
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Match: A0A836C9X3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X3_9STRA) HSP 1 Score: 171 bits (434), Expect = 3.030e-50 Identity = 87/174 (50.00%), Postives = 119/174 (68.39%), Query Frame = 1 Query: 4 DQAEPTVNTNFFNTVSFTESMMPLVRRSTAGRVVNVASRFGHLSIIPDGTLRRKFESPT----LSKEELSSLMAKFVEDVQNDRHRQEGWASTCYGMSKLGLIAYTKVVARIEQESGSGVLVNACCPGYCDTDMTSHRGSSPAEVGALTPFMLSQLPDGGFTGGFFAEERPLVW 513 +QAEPT++ NFF+TV+ TE ++PLV+RS GR+VNVAS GHL I+PD LR KF S L +EL L FV+DV+ +H+++GW ++CYGMSKL LIAYTK++A E + VNACCPGY TDM+ +G + GALTPFML+ G +GGF+++E+ + W Sbjct: 104 EQAEPTMDINFFSTVATTERLLPLVKRSPHGRIVNVASMSGHLRIVPDAELRAKFASAGQPGGLGHDELMLLARGFVQDVKEGKHKEKGWPNSCYGMSKLCLIAYTKILAAREPT----LKVNACCPGYVATDMSGQQGHKRPDQGALTPFMLATGALDGTSGGFWSDEKRIDW 273
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Match: A0A7S2UVT3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVT3_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.610e-49 Identity = 87/169 (51.48%), Postives = 116/169 (68.64%), Query Frame = 1 Query: 7 QAEPTVNTNFFNTVSFTESMMPLVRRSTAGRVVNVASRFGHLSIIPDGTLRRKFESPTLSKEELSSLMAKFVEDVQNDRHRQEGWASTCYGMSKLGLIAYTKVVARIEQESGSGVLVNACCPGYCDTDMTSHRGSSPAEVGALTPFMLSQLPDGGFTGGFFAEERPLVW 513 QA PT+ TNF+ TV T++++PL+R+S A R+VNVAS GHL I+ + F S +L++ L LM F DVQ H Q GW STCYGMSKLG+IA+TK++AR E G++VN CCPG C TDM+S GS AE GA TP++L+Q+P G +GGF++ ER +VW Sbjct: 133 QAAPTLRTNFWATVQVTDALLPLLRQSPAARIVNVASMSGHLRILSHER-QDIFSSSSLTRPVLYDLMRAFEADVQAGVHHQNGWPSTCYGMSKLGVIAFTKILAREEP----GMVVNCCCPGGCRTDMSSGSGSKTAEEGARTPYLLTQMPPGTKSGGFWSGEREIVW 296
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Match: A0A7S0F9Q4_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0F9Q4_9DINO) HSP 1 Score: 167 bits (422), Expect = 4.860e-48 Identity = 89/170 (52.35%), Postives = 117/170 (68.82%), Query Frame = 1 Query: 7 QAEPTVNTNFFNTVSFTESMMPLVRRSTAGRVVNVASRFGHLSIIPDGTLRRKFESPTLSKEELSSLMAKFVEDVQNDRHRQEGWASTCYGMSKLGLIAYTKVVARIEQESGSGVLVNACCPGYCDTDMTSHRGS-SPAEVGALTPFMLSQLPDGGFTGGFFAEERPLVW 513 Q PT+ TNF+ TV+ T+ ++PL+RR + RVVNVAS G L + G+L+R+F SP L+++EL +L+ KF +DV RHRQEGW ++ YG+SKL LIAYT +VAR E G+ + NACCPGYCDTDM+SHRG SPAE GA ML+ L D G TG F + + W Sbjct: 143 QTLPTLRTNFWGTVALTDQLLPLLRRGRSPRVVNVASMAGRLGQV-SGSLQRRFSSPALTRDELFALVRKFQDDVAAGRHRQEGWGNSNYGLSKLALIAYTLLVAR---EEGNAMRANACCPGYCDTDMSSHRGPRSPAE-GARNATMLALLRDDGPTGAFVRDMQISEW 307
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Match: A0A7S2U7F4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7F4_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.070e-45 Identity = 78/171 (45.61%), Postives = 111/171 (64.91%), Query Frame = 1 Query: 1 RDQAEPTVNTNFFNTVSFTESMMPLVRRSTAGRVVNVASRFGHLSIIPDGTLRRKFESPTLSKEELSSLMAKFVEDVQNDRHRQEGWASTCYGMSKLGLIAYTKVVARIEQESGSGVLVNACCPGYCDTDMTSHRGSSPAEVGALTPFMLSQLPDGGFTGGFFAEERPLVW 513 ++Q +PT++ NF T++FTE M+PL+R+ + R+VNVAS GHL +P LR KF +P+L+ EL+ L+ F DVQ +HR+ GW ++ YGMSKL LIA TKV+AR E + VN CCPGYCDTDMTSH+G + GA + + + D + G FF++ + W Sbjct: 48 KEQTKPTLDINFRGTINFTEQMLPLLRKGSDARIVNVASGSGHLGQLPSKELRDKFSAPSLTMPELNQLVDNFESDVQQGKHRETGWGNSNYGMSKLALIAATKVLAR---EEAPRIAVNCCCPGYCDTDMTSHKGHRHPKEGAKNAIIPATMEDPPY-GEFFSDFKVGEW 214
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Match: A0A813EFJ7_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EFJ7_POLGL) HSP 1 Score: 161 bits (407), Expect = 1.820e-45 Identity = 83/173 (47.98%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 7 QAEPTVNTNFFNTVSFTESMMPLVRRSTAG----RVVNVASRFGHLSIIPDGTLRRKFESPTLSKEELSSLMAKFVEDVQNDRHRQEGWASTCYGMSKLGLIAYTKVVARIEQESGSGVLVNACCPGYCDTDMTSHRGSSPAEVGALTPFMLSQLPDGGFTGGFFAEERPLVW 513 Q PT+ TNFF T T+ ++PL+R S A R+VNVAS G L + L+++F SP L + L +L+ KF DV+ +RH+QEGW ++ YG SKL +IAYTK+VAR E G+G+ VNACCPGYC TDM+++RG EVGA +L+ LPD G +G FF E W Sbjct: 169 QTGPTLKTNFFGTAELTDRLLPLLRASAASGGQPRLVNVASMAGALRQVSP-QLQQQFSSPALDRAGLDALVRKFAADVRAERHKQEGWGNSNYGFSKLAVIAYTKLVAR---EEGTGMRVNACCPGYCKTDMSNNRGGQSPEVGARNAVLLALLPDSGPSGAFFQNEANSAW 337
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Match: A0A7S3GV84_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV84_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.810e-45 Identity = 80/177 (45.20%), Postives = 120/177 (67.80%), Query Frame = 1 Query: 1 RDQAEPTVNTNFFNTVSFTESMMPLVRRSTAGRVVNVASRFGHLSIIPDGTLRRKFES-PTLSKEELSSLMAKFVEDVQNDRHRQEGWASTCYGMSKLGLIAYTKVVARIEQES--GSGVLVNACCPGYCDTDMTSHRGSSPAEVGALTPFMLSQLPDGGF---TGGFFAEERPLVW 513 ++Q PT+ NFF T+ TES+MPL++++ + R+VNVAS+ GHL I+ L+ +F + P++ L +L+ ++V VQ+ H ++GW ++ YG+SKL +IA T+++A+ E E+ G L+NACCPGYCDTDMTSH+G PAE GA TP ML+ L + G TG FF +E + W Sbjct: 99 KEQTLPTIEPNFFGTMRITESLMPLLQKAESPRIVNVASQSGHLRILKSEELKERFVNCPSIDA--LENLVNEYVSSVQDGTHTEKGWPNSNYGISKLAVIALTRILAKREAEANPGKNFLINACCPGYCDTDMTSHKGPRPAEHGARTPAMLALLSEVGPVAPTGKFFFDEAEVEW 273
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Match: K0SJD2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJD2_THAOC) HSP 1 Score: 152 bits (385), Expect = 7.760e-44 Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 1 Query: 7 QAEPTVNTNFFNTVSFTESMMPLVRRSTAGRVVNVASRFGHLSIIPDGTLRRKFESPTLSKEELSSLMAKFVEDVQNDRHRQEGWASTCYGMSKLGLIAYTKVVARIEQESGSGVLVNACCPGYCDTDMTSHRGSSPAEVGA---LTPFMLSQLPDGGFTGGFFAEERPLVW 513 Q +PT+ NF+ TV FTE M+PL+R+ R+VNVAS GHL + L+RKF SP L+K+EL SL+ +F DV + RH + GW ++ YGMSKL LIA TK+ AR E+ + VN CCPGYC TDM+SHRG+ GA L P M+ P +G +FA+ W Sbjct: 30 QCKPTLAVNFWGTVDFTEEMLPLLRKGNDARIVNVASMAGHLGQLRSRGLQRKFSSPDLTKDELFSLVEEFQRDVLSGRHTEAGWGNSNYGMSKLALIAMTKIWAREEE---GDISVNCCCPGYCATDMSSHRGNRHPSEGARNALIPAMMESAP----SGEYFADFGIASW 194
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Match: A0A7S3QJ67_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ67_9STRA) HSP 1 Score: 154 bits (389), Expect = 3.240e-43 Identity = 76/170 (44.71%), Postives = 113/170 (66.47%), Query Frame = 1 Query: 7 QAEPTVNTNFFNTVSFTESMMPLVRRSTAGRVVNVASRFGHLSIIPDGTLRRKFESPTLSKEELSSLMAKFVEDVQNDRHRQEGWASTCYGMSKLGLIAYTKVVARIEQESGSGVLVNACCPGYCDTDMTSHRGSSPAEVGALTPFMLSQLPDGGF-TGGFFAEERPLVW 513 QA+ TV TNFF T+S T+S++PL+R+S++ R++N+AS G L+I+P R F S L+ E+L M +F+ +VQ+ H+ +GW +TCYG SK+ +IA TK++AR E S ++VN+ PGYC T +++G PAE GA TPF+L LPD F T + EE+ + W Sbjct: 131 QADLTVRTNFFGTLSLTQSLLPLLRKSSSPRIINIASSAGRLAILPSQQRRDDFTSENLTLEQLEGYMEEFIRNVQDGTHQNKGWPNTCYGASKVAIIAMTKIMARSE----SNIMVNSVDPGYCATHQNNNQGYVPAERGATTPFLLVTLPDDQFFTAVHWYEEQAIKW 296 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9324.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9324.1.1 >prot_C-tenellus_contig9324.1.1 ID=prot_C-tenellus_contig9324.1.1|Name=mRNA_C-tenellus_contig9324.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=172bp RDQAEPTVNTNFFNTVSFTESMMPLVRRSTAGRVVNVASRFGHLSIIPDGback to top mRNA from alignment at C-tenellus_contig9324:62..3856+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9324.1.1 ID=mRNA_C-tenellus_contig9324.1.1|Name=mRNA_C-tenellus_contig9324.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3795bp|location=Sequence derived from alignment at C-tenellus_contig9324:62..3856+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9324:62..3856+ >mRNA_C-tenellus_contig9324.1.1 ID=mRNA_C-tenellus_contig9324.1.1|Name=mRNA_C-tenellus_contig9324.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=516bp|location=Sequence derived from alignment at C-tenellus_contig9324:62..3856+ (Choristocarpus tenellus KU2346)back to top |