mRNA_C-tenellus_contig9318.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9318.1.1 vs. uniprot
Match: A0A6H5KN32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN32_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 6.190e-16 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 4 SPLMTCRQEGGWRVITRGQATCVLRRMVKGLKLRREEYAVHSDRIGGVTRLANMGVTELVIQREGRWKSRAFMGYVRDNRRDPVLMSKGLA 276 +PLM ++G W V++R +AT VLR M + + +A+HS RIGG T+LA G + + IQR GRWKS AFM YVR +S+ LA Sbjct: 25 APLMQSVKQGRWAVVSRSEATTVLRDMARRVGEDPTHFALHSGRIGGATQLAKQGASVVQIQRAGRWKSGAFMTYVRAGGDGANCVSRALA 115
BLAST of mRNA_C-tenellus_contig9318.1.1 vs. uniprot
Match: A0A6H5KDK3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK3_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 1.310e-15 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 1 DSPLMTCRQEGGWRVITRGQATCVLRRMVKGLKLRREEYAVHSDRIGGVTRLANMGVTELVIQREGRWKSRAFMGYVRD 237 ++PL+T + GWRVITR + LR MV+ + L +A+HS RIG T++A G++ L IQ GRWKS+AFM YVRD Sbjct: 244 NAPLLTRQTPSGWRVITRTEGVAALRVMVESIGLNPAHFALHSGRIGAATQMAAQGLSALQIQHAGRWKSQAFMVYVRD 322
BLAST of mRNA_C-tenellus_contig9318.1.1 vs. uniprot
Match: A0A6H5K8A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A0_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 3.400e-14 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 4 SPLMTCRQEGGWRVITRGQATCVLRRMVKGLKLRREEYAVHSDRIGGVTRLANMGVTELVIQREGRWKSRAFMGYVRDNRRDPVLMSKGLAE 279 +PL + W+VI+R +A+ LR +V ++YA+HS RIGG T LA+MG + + IQR GRWKS AFM YVR +S+ L E Sbjct: 112 APLTQSWAQDRWKVISRAEASRHLRLLVSAAGRDPQKYALHSGRIGGATHLASMGASVIQIQRAGRWKSSAFMVYVRAGGEGAKFVSQALTE 203
BLAST of mRNA_C-tenellus_contig9318.1.1 vs. uniprot
Match: A0A6H5KDR9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDR9_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 1.350e-13 Identity = 40/80 (50.00%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 37 WRVITRGQATCVLRRMVKGLKLRREEYAVHSDRIGGVTRLANMGVTELVIQREGRWKSRAFMGYVRDNRRDPVLMSKGLA 276 W+V T Q++ LR +V G L+ EEYA HS RIGG TRL MG++ IQ++GRWKS AF Y+R N D S LA Sbjct: 277 WKVWTCAQSSSALRDLVAGQGLKPEEYAPHSGRIGGATRLGAMGLSSWAIQQQGRWKSSAFQSYLRANLDDVQKASFALA 356
BLAST of mRNA_C-tenellus_contig9318.1.1 vs. uniprot
Match: A0A6H5JRM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRM8_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 3.550e-13 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 4 SPLMTCRQEGGWRVITRGQATCVLRRMVKGLKLRREEYAVHSDRIGGVTRLANMGVTELVIQREGRWKSRAFMGYVRDNRRDPVLMSKGLAE 279 +PLM + W+VI+R + + LR +V ++YA+HS RIGG T LA MG + + IQR GRWKS AFM YVR +S+ L E Sbjct: 156 APLMQSWAQDRWKVISRAETSRHLRLLVSAAGRDPQKYALHSGRIGGGTHLAIMGASVIQIQRAGRWKSSAFMVYVRAGGEGAKFVSQALTE 247
BLAST of mRNA_C-tenellus_contig9318.1.1 vs. uniprot
Match: A0A1S3I286_LINUN (uncharacterized protein LOC106160349 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I286_LINUN) HSP 1 Score: 60.1 bits (144), Expect = 1.610e-8 Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 1 Query: 46 ITRGQATCVLRRMVKGLKLRREEYAVHSDRIGGVTRLANMGVTELVIQREGRWKSRAFMGYVR 234 +TR Q TC LR++ ++L Y HS RIGG T A++G+ +I++ GRWKS AFM Y+R Sbjct: 326 VTRHQFTCALRQLFTAIQLNDTRYKSHSFRIGGATLAASLGLPSDLIRQLGRWKSNAFMKYIR 388
BLAST of mRNA_C-tenellus_contig9318.1.1 vs. uniprot
Match: A0A822H4P3_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822H4P3_9NEOB) HSP 1 Score: 54.7 bits (130), Expect = 1.290e-6 Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 46 ITRGQATCVLRRMVKGLKLRREEYAVHSDRIGGVTRLANMGVTELVIQREGRWKSRAFMGYVR 234 +T+ Q + R+ ++ L + +EY HS RIG T A GV+E+ +QR GRWKS F Y+R Sbjct: 348 LTKYQFQAIFRQCLEALGVAPKEYGTHSFRIGAATEAARAGVSEVEVQRMGRWKSACFARYIR 410
BLAST of mRNA_C-tenellus_contig9318.1.1 vs. uniprot
Match: A0A821G0U1_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821G0U1_9NEOB) HSP 1 Score: 54.7 bits (130), Expect = 1.320e-6 Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 46 ITRGQATCVLRRMVKGLKLRREEYAVHSDRIGGVTRLANMGVTELVIQREGRWKSRAFMGYVR 234 +T+ Q + R+ ++ L + +EY HS RIG T A GV+E+ +QR GRWKS F Y+R Sbjct: 429 LTKYQFQAIFRQCLEALGVAPKEYGTHSFRIGAATEAARAGVSEVEVQRMGRWKSACFARYIR 491
BLAST of mRNA_C-tenellus_contig9318.1.1 vs. uniprot
Match: A0A8B6FXM2_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6FXM2_MYTGA) HSP 1 Score: 50.8 bits (120), Expect = 2.170e-5 Identity = 22/56 (39.29%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 109 EEYAVHSDRIGGVTRLANMGVTELVIQREGRWKSR-AFMGYVRDNRRDPVLMSKGL 273 ++Y +HS R GG T AN+G+++ + +R GRW+S A GY++D+ +D +++S+ L Sbjct: 176 KKYGLHSLRSGGATTCANLGISDRLFKRHGRWRSETAKDGYIKDSLKDRLIVSENL 231 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9318.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9318.1.1 >prot_C-tenellus_contig9318.1.1 ID=prot_C-tenellus_contig9318.1.1|Name=mRNA_C-tenellus_contig9318.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=89bp MTCRQEGGWRVITRGQATCVLRRMVKGLKLRREEYAVHSDRIGGVTRLANback to top mRNA from alignment at C-tenellus_contig9318:119..397+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9318.1.1 ID=mRNA_C-tenellus_contig9318.1.1|Name=mRNA_C-tenellus_contig9318.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=279bp|location=Sequence derived from alignment at C-tenellus_contig9318:119..397+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9318:119..397+ >mRNA_C-tenellus_contig9318.1.1 ID=mRNA_C-tenellus_contig9318.1.1|Name=mRNA_C-tenellus_contig9318.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=267bp|location=Sequence derived from alignment at C-tenellus_contig9318:119..397+ (Choristocarpus tenellus KU2346)back to top |