mRNA_C-tenellus_contig929.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Match: D7FZ17_ECTSI (Domain repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ17_ECTSI) HSP 1 Score: 164 bits (415), Expect = 8.170e-45 Identity = 86/165 (52.12%), Postives = 108/165 (65.45%), Query Frame = 1 Query: 1 QCWGKNTSGQLGLGHIETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSSHSCALLADASLRCWGRNFYGNLGIETFRSVGHSRSAPTALAPAVDLGLELEALAISAGGESSCAVLNDGNAKCWGKNLGGELGVGDTYNRGDDAMEMGDYLLTVDLGTNVAVSA 495 +CWG N SGQLGLGH++TIGDDP EMGD L VDLG +A ++S G SH+CA+L D S RCWG+ F G LG + S G A AVDLG + ++AG + +CA L+DG+ KCWG N G LG+GDT +RGD A EMGD L +DLGT V V++ Sbjct: 297 KCWGDNRSGQLGLGHVDTIGDDPFEMGDDLPYVDLGAGN--TATSLSLGESHTCAILGDGSTRCWGKGFAGQLGRGEYYSRGKYVGEMGAGLAAVDLGTNATSSFLAAGADFTCAGLDDGSVKCWGLNELGALGLGDTDSRGDGADEMGDSLPAIDLGTGVTVAS 459
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Match: A0A6H5L5B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5B3_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.260e-44 Identity = 87/165 (52.73%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 1 QCWGKNTSGQLGLGHIETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSSHSCALLADASLRCWGRNFYGNLGIETFRSVGHSRSAPTALAPAVDLGLELEALAISAGGESSCAVLNDGNAKCWGKNLGGELGVGDTYNRGDDAMEMGDYLLTVDLGTNVAVSA 495 +CWG N SGQLGLGH++TIGDDP EMGD L VDLG +A ++S G SHSCA+L D S RCWG+ F G LG + G A AVDLG A ++AG + +CA L+DG+ KCWG N G LG+GDT +RGD A EMGD L +DLGT V V++ Sbjct: 335 KCWGDNRSGQLGLGHVDTIGDDPSEMGDDLPYVDLGAGN--TATSLSLGESHSCAILGDGSTRCWGKGFAGQLGRGEYYCRGKYVGEMGAGLAAVDLGTNATASFLAAGADFTCAGLDDGSVKCWGLNELGALGLGDTDSRGDGAAEMGDALPAIDLGTGVTVAS 497
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Match: A0A7Z9UFE8_9BACT (Big_5 domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7Z9UFE8_9BACT) HSP 1 Score: 159 bits (401), Expect = 2.160e-42 Identity = 80/159 (50.31%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 1 QCWGKNTSGQLGLGHIETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSSHSCALLADASLRCWGRNFYGNLGIETFRSVGHSRSAPTALAPAVDLGLELEALAISAGGESSCAVLNDGNAKCWGKNLGGELGVGDTYNRGDDAMEMGDYLLTVDLGT 477 +CWGKN GQLGLG+ GD+ EMGD L VDLG + +A AI+AG H+CA+L +AS++CWG N G LGI + G S + PA+DLG A AI+AG + +CA+L++ + KCWG N G+LG+GDT NRGD++ EMGD L VDLG+ Sbjct: 269 KCWGKNNLGQLGLGNTSNRGDNSSEMGDNLPVVDLGTGR--TAKAIAAGDYHTCAILDNASIKCWGANASGQLGIGDTNNRGDESSEMGDILPAIDLGSGRTATAITAGNQHTCAILDNASIKCWGANASGQLGIGDTSNRGDESSEMGDTLPAVDLGS 425
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Match: A0A520PN85_9PROT (Big_5 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A520PN85_9PROT) HSP 1 Score: 158 bits (399), Expect = 2.470e-42 Identity = 85/169 (50.30%), Postives = 109/169 (64.50%), Query Frame = 1 Query: 1 QCWGKNTSGQLGLGHIETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSSHSCALLADASLRCWGRNFYGNLGIETFRSVGHSRSAPTALAPAVDLGLELEALAISAGGESSCAVLNDGNAKCWGKNLGGELGVGDTYNRGDDAMEMGDYLLTVDLGTN-VAVSATGG 504 +CWGKN GQLG G+ ++GD EMGD L P+DLG + +A AI+ G H+CA+L ++S++CWG N G LGI + G + P++DLG A AI+AGG SCA+L++ KCWGKN G+LG+GDT NRGD A EMGD L VDLGT AVS T G Sbjct: 266 KCWGKNDRGQLGQGNTNSLGDAGSEMGDNLTPIDLGTGR--TATAIAGGGWHNCAILDNSSIKCWGINSAGQLGIGSTDDRGDGANEMGDNLPSIDLGTGRTATAIAAGGAHSCAILDNSAVKCWGKNDAGQLGLGDTNNRGDGADEMGDDLDAVDLGTGRTAVSITAG 432
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Match: A0A2J7ZMN6_9CHLO (RCC1 and BTB domain-containing protein 2 n=2 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZMN6_9CHLO) HSP 1 Score: 154 bits (389), Expect = 1.020e-41 Identity = 80/159 (50.31%), Postives = 104/159 (65.41%), Query Frame = 1 Query: 1 QCWGKNTSGQLGLGHIETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSSHSCALLADASLRCWGRNFYGNLGIETFRSVGHSRSAPTALAPAVDLGLELEALAISAGGESSCAVLNDGNAKCWGKNLGGELGVGDTYNRGDDAMEMGDYLLTVDLGT 477 +CWG N GQLGLGH + IGDDP EMGD L VDLG + +AVA++AG H+CA+L D ++CWG N LG+ +S G + + P V+LG L A +I+AG +CAVL++G KCWG N G+LG+GDT +RG A +MGD L VDLGT Sbjct: 217 KCWGGNMDGQLGLGHSDNIGDDPGEMGDDLPAVDLGTGR--TAVALAAGDRHTCAILDDGGIKCWGNNGDYQLGLGDSKSRGSTSTNMGDALPYVNLGQGLTATSIAAGAAHTCAVLDNGALKCWGGNTYGQLGLGDTKSRGGSAADMGDALPNVDLGT 373
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Match: A0A0K1EHP4_CHOCO (Uncharacterized protein n=2 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EHP4_CHOCO) HSP 1 Score: 155 bits (393), Expect = 1.870e-41 Identity = 84/159 (52.83%), Postives = 100/159 (62.89%), Query Frame = 1 Query: 1 QCWGKNTSGQLGLGHIETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSSHSCALLADASLRCWGRNFYGNLGIETFRSVGHSRSAPTALAPAVDLGLELEALAISAGGESSCAVLNDGNAKCWGKNLGGELGVGDTYNRGDDAMEMGDYLLTVDLGT 477 +CWG NT G+LGLG GD P EMGD L VDLG + +A A+S G SH+CALL D S++CWG N G LG+ G PAVDLG A+A+ AG +CA+LNDG+ KCWG N GELG+GDT +RGD A EMGD L VDLGT Sbjct: 333 KCWGFNTGGKLGLGDTAPRGDGPGEMGDALLAVDLGAGR--TAAALSVGGSHACALLDDGSVKCWGGNGQGQLGLGDAEHRGDGAGEMGDALPAVDLGTGKTAVAVHAGHFHTCALLNDGSLKCWGGNDSGELGLGDTAHRGDAAGEMGDALPAVDLGT 489
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Match: A0A383CPK5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383CPK5_9ZZZZ) HSP 1 Score: 147 bits (372), Expect = 2.220e-41 Identity = 79/165 (47.88%), Postives = 104/165 (63.03%), Query Frame = 1 Query: 1 QCWGKNTSGQLGLGHIETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSSHSCALLADASLRCWGRNFYGNLGIETFRSVGHSRSAPTALAPAVDLGLELEALAISAGGESSCAVLNDGNAKCWGKNLGGELGVGDTYNRGDDAMEMGDYLLTVDLGTNVAVSA 495 +CWG N SGQLGLG+ + GD+ EMGD L VDLG K +A AI AG +H+CA+L +AS++CWG N G LG+ S G + S P V++G A AI+AG +CA+L++ KCWG N G+LG+GD NRGD++ EMG L TVDLG+ A Sbjct: 62 KCWGSNGSGQLGLGNTTSRGDNASEMGDSLPVVDLGTGK--TARAIEAGDNHTCAILDNASVKCWGSNASGQLGLGDTDSRGDNSSEMGDSLPIVNMGSGRTAKAIAAGYAHTCAILDNAYVKCWGSNTSGQLGLGDINNRGDNSSEMGGNLTTVDLGSGRTTKA 224
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Match: A0A017SY21_9DELT (Uncharacterized protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017SY21_9DELT) HSP 1 Score: 155 bits (391), Expect = 6.580e-41 Identity = 88/173 (50.87%), Postives = 110/173 (63.58%), Query Frame = 1 Query: 1 QCWGKNTSGQLGLGHI--ETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSSHSCALLADASLRCWGRNFYGNLGIETFRSVGHSRSAPTALAPAVDLGLELEALAISAGGESSCAVLNDGNAKCWGKNLGGELGVGDTYNRGDDAMEMGDYLLTVDLGTN---VAVSATGG 504 +CWG N GQLGLG +GD EMG L V+LG K +AVA++AG +H+CA+L D +L+CWG N G LG+ +VG S S PAV LG A+A+SA GE +CAVLNDG+ KCWG N G+LG+GDT +RG D +MGD L V LGT +AVSA GG Sbjct: 284 KCWGGNAYGQLGLGFSFNNRVGDQVGEMGANLPAVNLGTGK--TAVALAAGDNHTCAVLNDGTLKCWGVNDSGQLGLGGMTAVGTSPSHMGDNLPAVALGTAKTAVAVSAAGEHTCAVLNDGSVKCWGNNDSGQLGLGDTLSRGGDTAQMGDSLPAVALGTGQSAIAVSAAGG 454
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Match: A0A848LCV5_9DELT (Tandem-95 repeat protein n=2 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LCV5_9DELT) HSP 1 Score: 154 bits (390), Expect = 1.780e-40 Identity = 80/159 (50.31%), Postives = 99/159 (62.26%), Query Frame = 1 Query: 1 QCWGKNTSGQLGLGHIETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSSHSCALLADASLRCWGRNFYGNLGIETFRSVGHSRSAPTALAPAVDLGLELEALAISAGGESSCAVLNDGNAKCWGKNLGGELGVGDTYNRGDDAMEMGDYLLTVDLGT 477 +CWG N GQLGLG E GD P +GD+L PVDLG + +A ++AG +H+CA+L D S++CWG N YG LG+ RS G P VDLG A ++AGG CA+L+DG KCWG N G LG+GDT RGDD EMGD L V+LGT Sbjct: 607 KCWGLNAWGQLGLGDHENRGDRPGNIGDWLSPVDLGTGR--TARGLAAGGAHTCAILDDGSVKCWGDNQYGQLGLGDTRSRGDDPGEMGDALPPVDLGTGRTAKTLAAGGNYVCAILDDGTVKCWGDNRSGTLGLGDTEARGDDPGEMGDALPLVELGT 763
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Match: UPI001F24619B (Ig-like domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F24619B) HSP 1 Score: 154 bits (388), Expect = 2.720e-40 Identity = 82/165 (49.70%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 1 QCWGKNTSGQLGLGHIETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSSHSCALLADASLRCWGRNFYGNLGIETFRSVGHSRSAPTALAPAVDLGLELEALAISAGGESSCAVLNDGNAKCWGKNLGGELGVGDTYNRGDDAMEMGDYLLTVDLGTNVAVSA 495 +CWG N SGQLGLG GD P EMGD L PV LG + A+A+ G SH+CALL D +++CWG N YG LG+ ++ G PAVDLG A A+ AG SCA+L+D KCWG+N G LG+GDT NRGD+ EMGD L VDLG A Sbjct: 450 KCWGINNSGQLGLGDTAHRGDGPGEMGDTLPPVALGTGRTAKALAV--GGSHACALLDDGAVKCWGYNVYGQLGLGDRQTHGDGPGEMGDALPAVDLGTGRTAKALIAGSTHSCALLDDDTVKCWGENADGNLGLGDTRNRGDNPDEMGDALPAVDLGAGRTAKA 612 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig929.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig929.3.1 >prot_C-tenellus_contig929.3.1 ID=prot_C-tenellus_contig929.3.1|Name=mRNA_C-tenellus_contig929.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=168bp QCWGKNTSGQLGLGHIETIGDDPREMGDYLQPVDLGQNKLQSAVAISAGSback to top mRNA from alignment at C-tenellus_contig929:7282..8969+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig929.3.1 ID=mRNA_C-tenellus_contig929.3.1|Name=mRNA_C-tenellus_contig929.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1688bp|location=Sequence derived from alignment at C-tenellus_contig929:7282..8969+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig929:7282..8969+ >mRNA_C-tenellus_contig929.3.1 ID=mRNA_C-tenellus_contig929.3.1|Name=mRNA_C-tenellus_contig929.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=504bp|location=Sequence derived from alignment at C-tenellus_contig929:7282..8969+ (Choristocarpus tenellus KU2346)back to top |