mRNA_C-tenellus_contig9286.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9286.1.1
Unique NamemRNA_C-tenellus_contig9286.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Match: A0A6H5L1Y5_9PHAE (MGS-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1Y5_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 7.930e-102
Identity = 166/190 (87.37%), Postives = 173/190 (91.05%), Query Frame = 2
Query:  320 QDVRTKRLLPDGAQRDLVVASITAKYTQSNSVGYATRGQMVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNARVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAFFPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFHH 889
            +DVRTK  LP+ AQRDLVVASI AKYTQSNSVGYA RGQMVGVGAGQQSRVDCVKLAARKV VWWLRHHPKVQGLQFK G KRQDRVNARVRYIEGDITASER AWE NF+  PE LT EEKDAF+AEL+GVSLSSDAFFPFRDSIDHASKVGVS++AQ GGSVADEQVIAACDEY MSMAFTG RLFHH
Sbjct:  421 KDVRTKSTLPEEAQRDLVVASICAKYTQSNSVGYAKRGQMVGVGAGQQSRVDCVKLAARKVSVWWLRHHPKVQGLQFKDGTKRQDRVNARVRYIEGDITASERPAWESNFEAKPEALTAEEKDAFLAELSGVSLSSDAFFPFRDSIDHASKVGVSYVAQAGGSVADEQVIAACDEYGMSMAFTGIRLFHH 610          
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Match: A0A836CED7_9STRA (Putative bifunctional purine synthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED7_9STRA)

HSP 1 Score: 293 bits (750), Expect = 4.820e-88
Identity = 147/190 (77.37%), Postives = 162/190 (85.26%), Query Frame = 2
Query:  320 QDVRTKRLLPDGAQRDLVVASITAKYTQSNSVGYATRGQMVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNARVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAFFPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFHH 889
            + V+TK  LPD A+RDL+VASI  KYTQSNSVGY+  GQMVGVGAGQQSRVDCVKLA RKV +W LRHHPKV+ L+FKAG KRQDRVNARVRYIEGDITASER  WE NF+EVPE LT  +K  FMA L GV+L+SDAFFPFRDSIDHASKVGVS+IAQ GGSVAD+ VIAA DEY M+MAFTG RLFHH
Sbjct:  424 EQVKTKAALPDAAKRDLIVASIAVKYTQSNSVGYSKNGQMVGVGAGQQSRVDCVKLAGRKVEIWRLRHHPKVKALKFKAGVKRQDRVNARVRYIEGDITASERPRWEANFEEVPEPLTEADKSEFMASLDGVALASDAFFPFRDSIDHASKVGVSYIAQAGGSVADDSVIAAADEYKMAMAFTGLRLFHH 613          
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Match: A0A6S9H1W5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H1W5_HETAK)

HSP 1 Score: 288 bits (737), Expect = 3.570e-86
Identity = 148/190 (77.89%), Postives = 160/190 (84.21%), Query Frame = 2
Query:  320 QDVRTKRLLPDGAQRDLVVASITAKYTQSNSVGYATRGQMVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNARVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAFFPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFHH 889
            +DVR   L  D A+RDL++ASIT KYTQSNSVG+A  GQMVGVGAGQQSRVDCVKLA RKV VWWLR HPKV GL FKAG KRQD+VNARVRYIEGDITA+ER  WE NF+ VPE LT EEK A++A L GV+LSSDAFFPFRDSIDHASKVGV FIAQPGGSVAD  VIAACDEY M+MAFT  RLFHH
Sbjct:  421 KDVRAGALTED-ARRDLLLASITLKYTQSNSVGFARSGQMVGVGAGQQSRVDCVKLAGRKVAVWWLRQHPKVMGLAFKAGVKRQDKVNARVRYIEGDITAAERPVWEANFESVPEPLTEEEKTAWLATLDGVALSSDAFFPFRDSIDHASKVGVKFIAQPGGSVADAGVIAACDEYGMAMAFTDVRLFHH 609          
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Match: A0A7S2YT67_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YT67_9STRA)

HSP 1 Score: 285 bits (728), Expect = 9.140e-85
Identity = 142/192 (73.96%), Postives = 158/192 (82.29%), Query Frame = 2
Query:  314 VSQDVRTKRLLPDGAQRDLVVASITAKYTQSNSVGYATRGQMVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNARVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAFFPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFHH 889
            +S  V TK++L D A+RDL+VASI  KYTQSNSVG+A  G MVGVGAGQQSRVDCVKLA RKV  W+LR HPKV GL+FK G KRQDRVNARVRYIEGD TA E+V WE  F  VPE LT EEKDAF+ E +GV++SSDAFFPFRDSIDHASK+GVSF+AQPGGSV D QV  ACDEY M+MAFTG RLFHH
Sbjct:  426 MSNVVTTKKVLGDDAERDLIVASICIKYTQSNSVGFAKDGMMVGVGAGQQSRVDCVKLAGRKVSTWYLRQHPKVLGLEFKDGVKRQDRVNARVRYIEGDFTAEEKVRWEAQFATVPEPLTAEEKDAFLKEASGVAVSSDAFFPFRDSIDHASKIGVSFVAQPGGSVQDAQVTEACDEYGMAMAFTGVRLFHH 617          
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Match: A0A7S1CYS9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYS9_CYCTE)

HSP 1 Score: 267 bits (683), Expect = 4.180e-82
Identity = 135/193 (69.95%), Postives = 150/193 (77.72%), Query Frame = 2
Query:  314 VSQDVRT-KRLLPDGAQRDLVVASITAKYTQSNSVGYATRGQMVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNARVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAFFPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFHH 889
            + +DV T  + L D A RD++VASI  KYTQSNSVG+A  G MVGVGAGQQSRVDCVKLA RKV  W+LR HPKV GL F  G KRQDRVNARV+YIEGD+T  ER  WE  F E+P  LT +EK  FMA  TGV +SSDAFFPFRDSIDHASK GVSF+AQPGGSV D QV +ACDEYNM M+FTG RLFHH
Sbjct:  100 IRKDVVTANKDLTDAAVRDMIVASICVKYTQSNSVGFAKDGMMVGVGAGQQSRVDCVKLAGRKVATWYLRQHPKVLGLAFAEGVKRQDRVNARVKYIEGDMTPQERAQWESQFAEIPSPLTPQEKQEFMANATGVCISSDAFFPFRDSIDHASKCGVSFVAQPGGSVQDSQVTSACDEYNMVMSFTGVRLFHH 292          
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Match: A0A7S2G180_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G180_9STRA)

HSP 1 Score: 265 bits (676), Expect = 4.600e-82
Identity = 142/226 (62.83%), Postives = 158/226 (69.91%), Query Frame = 2
Query:  254 PPPYEYYIILLTSRPLCGPLVSQD--------------VRTKRLLPDGAQRDLVVASITAKYTQSNSVGYATRGQMVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNARVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAFFPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFHH 889
            PPP EY       R + G + SQ               + TK  +P+ A RDLV+ASIT KYTQSNSV YA  GQ++GVGAGQQSRVDCVKLA RKV +WW R HPKVQ LQFK G+KRQDRVNARVRYIEGDITA+E   W +NF   PE LT EEK  +MA L   +LSSDAFFPFRDSIDHASK GV +IAQ GGSV D  V AACDEY M+M  TG RLFHH
Sbjct:    4 PPPVEY-------REVYGAVFSQKRNETIVTAESMTNVITTKTDVPESAVRDLVLASITIKYTQSNSVAYAVNGQIIGVGAGQQSRVDCVKLAGRKVSIWWCRQHPKVQALQFKEGSKRQDRVNARVRYIEGDITAAEMPIWLENFAVAPEPLTAEEKAEWMATLDETALSSDAFFPFRDSIDHASKFGVKYIAQAGGSVQDTAVAAACDEYGMAMCLTGLRLFHH 222          
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Match: A0A6T6HRK1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HRK1_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.230e-81
Identity = 132/182 (72.53%), Postives = 145/182 (79.67%), Query Frame = 2
Query:  344 LPDGAQRDLVVASITAKYTQSNSVGYATRGQMVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNARVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAFFPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFHH 889
            L D A RDL+VASI  KYTQSNSVG+A  G MVGVGAGQQSRVDCVKLA RKV  W+LR HPKV  L FKAG KRQDRVNARVRYIEGD T  E+V W   F E PE LT +EK+ F+   TGVS+SSDAFFPFRDSIDHASK+GV+++AQPGGSV D QV  ACDEY M+M FTGTRLFHH
Sbjct:    9 LDDAAVRDLIVASICIKYTQSNSVGFAKDGMMVGVGAGQQSRVDCVKLAGRKVCTWYLRQHPKVLALPFKAGVKRQDRVNARVRYIEGDFTEEEKVRWAAQFTETPEPLTEDEKNDFLKGSTGVSISSDAFFPFRDSIDHASKLGVTYVAQPGGSVQDGQVTEACDEYGMAMCFTGTRLFHH 190          
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Match: B8C300_THAPS (Probable bifunctional purine synthesis protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C300_THAPS)

HSP 1 Score: 273 bits (697), Expect = 3.130e-80
Identity = 134/182 (73.63%), Postives = 149/182 (81.87%), Query Frame = 2
Query:  344 LPDGAQRDLVVASITAKYTQSNSVGYATRGQMVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNARVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAFFPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFHH 889
            L + A RD++VASI  KYTQSNSVG+A  G MVGVGAGQQSRVDCVKLA RKV  W+LR HPKV GL+FK G KRQDRVNARVRYIEGD TA ER  WE  F+ +PE LT EEKD FM + TGV++SSDAFFPFRDSIDHASKVGVS++AQPGGSV D+QV A CD+Y M MAFTG RLFHH
Sbjct:  435 LTEDAIRDMIVASICVKYTQSNSVGFAKDGMMVGVGAGQQSRVDCVKLAGRKVTTWYLRQHPKVLGLKFKEGIKRQDRVNARVRYIEGDFTAEERTRWESQFETIPEPLTQEEKDDFMKQATGVTISSDAFFPFRDSIDHASKVGVSYVAQPGGSVQDDQVTACCDDYGMKMAFTGVRLFHH 616          
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Match: A0A7S1H2X5_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H2X5_9STRA)

HSP 1 Score: 262 bits (669), Expect = 3.450e-80
Identity = 133/188 (70.74%), Postives = 147/188 (78.19%), Query Frame = 2
Query:  326 VRTKRLLPDGAQRDLVVASITAKYTQSNSVGYATRGQMVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNARVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAFFPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFHH 889
            V TK+ L +GA RDL+VASI  KYTQSNSVG+A  G MVGVGAGQQSRVDCVKLA RKV  W+LR HPKV  L FK G KRQDRVNARVRYIEGD T  E+  WE  F E P  LT EEK  F+ + TG+S+SSDAFFPFRDSIDHASK+GVS++AQPGGSV D QV  ACDEY M+M FTG RLFHH
Sbjct:   93 VTTKKELGEGALRDLMVASICLKYTQSNSVGFAKDGMMVGVGAGQQSRVDCVKLAGRKVCTWYLRQHPKVLSLPFKEGIKRQDRVNARVRYIEGDFTDEEKTRWEAQFTEAPPVLTDEEKAEFLKQSTGISISSDAFFPFRDSIDHASKLGVSYVAQPGGSVQDGQVTEACDEYGMAMCFTGIRLFHH 280          
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Match: A0A7S2MN46_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2MN46_9DINO)

HSP 1 Score: 258 bits (659), Expect = 4.870e-79
Identity = 132/191 (69.11%), Postives = 150/191 (78.53%), Query Frame = 2
Query:  320 QDVRTK-RLLPDGAQRDLVVASITAKYTQSNSVGYATRGQMVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNARVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAFFPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFHH 889
            Q V TK + LPD AQ DL++ASI  KYTQSNSVGY+  G M+GVGAGQQSRVDCVKLAARK   W LR HPKV  L FKAG KRQDRVNARVRYIEGD+  +E   WE NFD  P  LT +EK  F+  L+GV++SSDAFFPFRDSID  S++GVS++AQPGGSVADE+VIAACD Y M+MAFT  RLFHH
Sbjct:   66 QKVVTKSKDLPDQAQLDLILASIAIKYTQSNSVGYSKGGMMIGVGAGQQSRVDCVKLAARKASTWRLRFHPKVMALSFKAGVKRQDRVNARVRYIEGDMQEAELQQWEKNFDAAPAPLTADEKAQFLQGLSGVAVSSDAFFPFRDSIDACSRIGVSYVAQPGGSVADEEVIAACDAYGMAMAFTDLRLFHH 256          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9286.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1Y5_9PHAE7.930e-10287.37MGS-like domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CED7_9STRA4.820e-8877.37Putative bifunctional purine synthesis protein n=1... [more]
A0A6S9H1W5_HETAK3.570e-8677.89Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2YT67_9STRA9.140e-8573.96Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1CYS9_CYCTE4.180e-8269.95Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2G180_9STRA4.600e-8262.83Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6T6HRK1_9STRA1.230e-8172.53Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
B8C300_THAPS3.130e-8073.63Probable bifunctional purine synthesis protein n=1... [more]
A0A7S1H2X5_9STRA3.450e-8070.74Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S2MN46_9DINO4.870e-7969.11Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9286contigC-tenellus_contig9286:954..4927 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKS8
Preferred nameATIC
PFAMsAICARFT_IMPCHas,MGS
Model size1678
Max annot lvl2759|Eukaryota
KEGG rclassRC00026,RC00263,RC00456
KEGG koko:K00602,ko:K06943
KEGG ReactionR01127,R04560
KEGG Pathwayko00230,ko00670,ko01100,ko01110,ko01130,ko01523,ko03008,map00230,map00670,map01100,map01110,map01130,map01523,map03008
KEGG ModuleM00048
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003360,GO:0003674,GO:0003824,GO:0003937,GO:0004643,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006760,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007049,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0009058,GO:0009060,GO:0009108,GO:0009116,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009235,GO:0009259,GO:0009260,GO:0009396,GO:0009611,GO:0009653,GO:0009987,GO:0010035,GO:0015980,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0016742,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019238,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0019953,GO:0021537,GO:0021543,GO:0021549,GO:0021987,GO:0022037,GO:0022402,GO:0022413,GO:0022414,GO:0030154,GO:0030435,GO:0030437,GO:0030900,GO:0030902,GO:0031099,GO:0031100,GO:0032501,GO:0032502,GO:0032505,GO:0033013,GO:0034293,GO:0034641,GO:0034654,GO:0042060,GO:0042221,GO:0042398,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043934,GO:0043935,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045333,GO:0046040,GO:0046390,GO:0046394,GO:0046452,GO:0046483,GO:0046653,GO:0046654,GO:0046983,GO:0048468,GO:0048513,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0051186,GO:0051188,GO:0051321,GO:0051704,GO:0055086,GO:0055114,GO:0060322,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1903046
Exons5
Evalue1.88e-86
EggNOG OGsCOG0138@1|root,KOG2555@2759|Eukaryota
EC2.1.2.3,3.5.4.10
DescriptionIMP cyclohydrolase activity
Cds size456
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9286.1.1prot_C-tenellus_contig9286.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9286 1390..4141 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790167.9633024-UTR-C-tenellus_contig9286:953..13891680790167.9633024-UTR-C-tenellus_contig9286:953..1389Choristocarpus tenellus KU2346UTRC-tenellus_contig9286 954..1389 +
1680790168.0501516-UTR-C-tenellus_contig9286:4141..49271680790168.0501516-UTR-C-tenellus_contig9286:4141..4927Choristocarpus tenellus KU2346UTRC-tenellus_contig9286 4142..4927 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790167.9766083-CDS-C-tenellus_contig9286:1389..14521680790167.9766083-CDS-C-tenellus_contig9286:1389..1452Choristocarpus tenellus KU2346CDSC-tenellus_contig9286 1390..1452 +
1680790167.9882507-CDS-C-tenellus_contig9286:2119..22141680790167.9882507-CDS-C-tenellus_contig9286:2119..2214Choristocarpus tenellus KU2346CDSC-tenellus_contig9286 2120..2214 +
1680790168.0046127-CDS-C-tenellus_contig9286:2776..29541680790168.0046127-CDS-C-tenellus_contig9286:2776..2954Choristocarpus tenellus KU2346CDSC-tenellus_contig9286 2777..2954 +
1680790168.0143552-CDS-C-tenellus_contig9286:3472..35231680790168.0143552-CDS-C-tenellus_contig9286:3472..3523Choristocarpus tenellus KU2346CDSC-tenellus_contig9286 3473..3523 +
1680790168.0367744-CDS-C-tenellus_contig9286:4072..41411680790168.0367744-CDS-C-tenellus_contig9286:4072..4141Choristocarpus tenellus KU2346CDSC-tenellus_contig9286 4073..4141 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9286.1.1

>prot_C-tenellus_contig9286.1.1 ID=prot_C-tenellus_contig9286.1.1|Name=mRNA_C-tenellus_contig9286.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=152bp
MVGVGAGQQSRVDCVKLAARKVGVWWLRHHPKVQGLQFKAGAKRQDRVNA
RVRYIEGDITASERVAWEDNFDEVPEKLTVEEKDAFMAELTGVSLSSDAF
FPFRDSIDHASKVGVSFIAQPGGSVADEQVIAACDEYNMSMAFTGTRLFH
H*
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mRNA from alignment at C-tenellus_contig9286:954..4927+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9286.1.1 ID=mRNA_C-tenellus_contig9286.1.1|Name=mRNA_C-tenellus_contig9286.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3974bp|location=Sequence derived from alignment at C-tenellus_contig9286:954..4927+ (Choristocarpus tenellus KU2346)
CTACAAGTTTGTGCTCAGTGATTTTATGTGGAGAGGGGTGGAAGGAGGGG TGGGGTCTCAAGCTTTGTTGTGATGTGATACAGTTGGGCTGGTGATCCAC GAGAACTGTCAGGGGGGAGGGGGGGTCATCTACAGAGTGCAGGAAGGCGT GTTTTCTTGATTTTTATTGGATCAATTGTGTGTATCTGTTTGGAGTAGTC GTAGTCATTCACCTTTTCCAAGTGCTCAGAAAATTGCAGGAAATTCAGCC CTCCCTCCCCCCTACGAATATTATATCATACTACTCACCTCCCGTCCCTT GTGTGGGCCTCTGGTGAGTCAGGATGTTCGTACAAAGCGCTTGCTTCCTG ATGGTGCCCAGCGAGACCTGGTGGTTGCATCAATTACAGCGAAATACACA CAGTCCAACTCTGTGGGGTATGCAACGAGGGGCCAGATGGTTGGGGTGGG AGCAGGACAGCAAAGTCGGGTGGACTGTGTGAAGCTGGCTGCAAGGAAGG TGCAAGGGGGTGTTTGATGAAATTGAAGCTGAAAATTTTGGAGGAGCCCA AGTGTGACAATCGATTGATGGAGTAGTTTGTGGATGAGGAGGGGGTATGT GCGACTCTTTCCTCTGGTTTGTACACGCCTTCGAAGTAATGTTGGAGTGA GTTAGTAGTAGTCCTTGAGTGTTCCTGGTGCAGGTCTTGTGGAAGCCACT GTTTGATGATAATATTTGTAGCAGTAGTGTAAGCTCCGCTTCTTTTGGTA GTGCACTGCACAGGTTTTGAAAGATTTTGGTTAGGTGATCAACAGCTCAT TTATCCCCCCATCCTTTCCAGCACGTTAGGTACAGAAATGATTCTGCGCA GTACTCTCTGAATATATCCAAGTCAGAACTAAAAACACGACCAGCTGCAG GACACCGAGTTGATGTCTCACAGTTTGCAAAGAAGTAGGGTGCTGCCATG GAAAGGCTTAACCCTATCCCTCCCTAAGAACTAGAAACGTGTAAATAAAT CGAGACAATCTCTCTCAATAACATTTAAAAATAAGGGAGGGGGTGGGGGG GAGTGTCACAGGAACCCTCTCAAGTGTTTCCCCCAAGACCCTCCCTACCT GGTCCCCTCTAGCTGGCCCAAGCATAACTTCCCCCACATGGCCTCCCCGT TCTCCTGGTTCTGAAGGTGGGGGTGTGGTGGCTGAGGCACCACCCCAAGG TTCAGGGACTTCAGTTCAAGGCTGGAGCCAAGCGGCAGGACCGTGTCAAT GCTCGAGTCAGGTGAGGTGTAGCAAAAGGGAGTGATGGATGTTGAATATT GGGGTCTACTGGCCCTGTCTCTTCACCTCTATATATCCTCAACCCTTTGA GGTTTGTTTGGAGTTAGGTTGTGTACGAAGATCTGGTCTGTGCTGGGCAC TAAAGTCCACAATGCCTGTATTCCGTTCCTTGTCCTGTTGGATTGCTCTT CATATAGGAATTGTGTGTGTGTGTTTCGACATGTATGTTAAGAGCATTGG AATGTGTTGAAAATGTTACGTTTTTTTTATAATTGAGTCTGAATTGCACA GTGCCGCTCGAGGAATGTAGAGAGCCCCCCCCAAAAAAAAAAAAAGCAAA TATTTATATAAATTTATGGGGGGAGCCTTCCTTTNNNNNNNNNNAATGTG TTAAAAATTTTAAGTTTTTTTTATAATTGAGTCTGAATTAAACAGTGCCG CTAGAGGAATGTAGAGAGAAAAACAAAAAAAAAAAAATGCATATATTTAT ATAAATTTATGTTGGTAGCTTTCTTATCCGTACCTATCAGTCATGCCAAC AACATGGAACTGAAACCGTGTAGGTACATTGAGGGAGATATCACAGCCTC TGAGAGAGTAGCCTGGGAGGACAACTTCGATGAAGTGCCGGAGAAGCTGA CAGTAGAAGAGAAGGATGCCTTCATGGCAGAGCTCACGGGGGTCAGCCTG TCCTCTGATGCCTTCTTCCCCTTCCGCGACTCCATTGACCACGCCTCCAA GGTATTAGGAGGGGGAGGAAAGTTCCTTTTTGTGTGTGTGTGTGTGTGTG TGTGTGTGTCTTGGTGTGATTCCCCTTCCTGTTGTATTGTATTTTGCCTT TATGTAGTGGATATGCTTACACTTTGTCACTTATCACCAGGTCTGCAATA CACCTCCGAGAGTCAACATAGTCTCCGCCCTTCAATGCAACCCACTGGCT TTACAGCTCATGGTGTGCATCCATGTATCCTCAGCACGGTCTGTTAAGTT TGGTGCTGCGCTGTGGTGCTCTGCGGTTCTAGTGGAAGCGGGCTTAGTTG GGATCCACGCCTCCTGTTGCTTTATTTCATAGGCACGCCCTTGTCATGCA CCCCCCCCACAGACGCAGGTGTCTTTTGGTGTACCTCTTGAGATTGAATG TTCACTTCGCTTTCAAGATGCGAGAATCTCCATCTTCCCCTTTCCTTTCT CCCACCTTTCCCCCCTCCCACCCCTCCCACCCCTCTATATATTTGTATCT ATTATATTTATATTTTCAGGTTGGCGTGTCGTTCATCGCGCAGCCAGGGG GATCTGTTGCAGATGAACAGGTGCGCTTTTTTTCTTACAATTGCATGGGC ATTCATTATTTTTTTTAGGGTGTGGTTTGGAATAGCTGTGGCTACTGGTA TGCAACAATGATCTAGATACTGGGGCTTGTGCTTGTGCTTGTGTCCACGG CAAAGTGTTCCACAGCCTAATGAGTAAGGCTTGGAAAGTGCTGGGGTTTT TTTATTGTACTGCCTTGTTGCAAGCAGTGAGTGGTGAGAATGTCAAGTGT ATTTCGTTCACCATTCAAATACACTGGGTGTTTGCCCAGGGAGAAAAATA TGATCAGACCTTCGTAGCATGGCCAGAATGCACTGTGGGTTGAGTTAAGA GCGGGTGCATTTAGAGGAGAGCTTGTCATTCGTTTGAGTATGTTCTTTAA GGTCACTACATGTGGTACATGGCACGGCTAGAGTAAATATACCCATCTTT GCTTGACGGGCGTGATGTAAAACCAGGTTGGACTCTTATGTTGCAATATG GGGTAATGTGCCATATTTTTTGCCCAATATCCTTTATCCCCTCCTCAATT GCTTGCAACCAATGATCAGGTAATTGCGGCTTGTGATGAGTACAACATGT CGATGGCCTTTACGGGCACTCGCCTCTTCCACCATTAGGATCTTCTAGAG CTGGAGTGTTCTATGTTAGGGCATCACGAAAAGTCTTGGGGTACAGAGTT TCGGTCACCAGGAGGTGCAATGTCTGTGGTCCTGGATCAAGCTGTTAACA GCTGGTGCAGTAGACCACAGTGAGATAAAAAATATTCCACAAAAGGGGAA AAAATTAGATTGAGAGAACTTGAAAAGAGTGAATCTTATTGTTTTGGAAC CAAACATGACCTCATGGCTCCCCAGCTATATTACCAATTAGAGTGTTCCA CATATGTGTTCCTCCCCCCTTTACCCACGAGTTTTGATTCTCTAGTATCT GACGAGATCTTGTGATGCAGACATGATAGTATTTTGATTATCATAAAGTG AGTAGTTGATAGTTGTGCTTATGTAGGGGGGTGCTCTTTGACACGGTGGT ACAGGAGTAATTTCATTGCTAGAATCTATGACTGGTTCAATCTAGGTTTA CCATATGTTGTGAGATGCTGATCTTGCTCCTCTTGTAGAGCCCTAAAGCA TTCATGAGGTGGACTCAGTTAATGCTGTGATTGGTGATATGTGTGATGTG TCTGAGATCATTGGAAGAGATTTCCTTACACCGTAGGAAGCGCTCGATAA TTGTCACTGAAACAATTGCAACTTTACCCCGACACAATAATATATAAAAA ATGGTACACAGAATCAAGCCCCAGAAAATAATTCTTTACATCTTTACACA CACCATCTTGTGCTATACGATGCACAGGTGAGCGTGTCAGTATTTGGGTT GTTAACCCTCAGTGCAAAATCCCG
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Coding sequence (CDS) from alignment at C-tenellus_contig9286:954..4927+

>mRNA_C-tenellus_contig9286.1.1 ID=mRNA_C-tenellus_contig9286.1.1|Name=mRNA_C-tenellus_contig9286.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=456bp|location=Sequence derived from alignment at C-tenellus_contig9286:954..4927+ (Choristocarpus tenellus KU2346)
ATGGTTGGGGTGGGAGCAGGACAGCAAAGTCGGGTGGACTGTGTGAAGCT
GGCTGCAAGGAAGGTGGGGGTGTGGTGGCTGAGGCACCACCCCAAGGTTC
AGGGACTTCAGTTCAAGGCTGGAGCCAAGCGGCAGGACCGTGTCAATGCT
CGAGTCAGGTACATTGAGGGAGATATCACAGCCTCTGAGAGAGTAGCCTG
GGAGGACAACTTCGATGAAGTGCCGGAGAAGCTGACAGTAGAAGAGAAGG
ATGCCTTCATGGCAGAGCTCACGGGGGTCAGCCTGTCCTCTGATGCCTTC
TTCCCCTTCCGCGACTCCATTGACCACGCCTCCAAGGTTGGCGTGTCGTT
CATCGCGCAGCCAGGGGGATCTGTTGCAGATGAACAGGTAATTGCGGCTT
GTGATGAGTACAACATGTCGATGGCCTTTACGGGCACTCGCCTCTTCCAC
CATTAG
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