mRNA_C-tenellus_contig9154.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: D7FRE0_ECTSI (DUF1084 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRE0_ECTSI) HSP 1 Score: 329 bits (844), Expect = 2.820e-105 Identity = 176/286 (61.54%), Postives = 229/286 (80.07%), Query Frame = 1 Query: 385 LIVQMAFFHAAAKLRMLHRYSPSLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGTLSATR-PEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGG-TSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIAGHEQGGASEGPVG 1236 L+ F HA KLRMLH S SLDTKKLFAMSVLL CLTRTMGF+TIGALN++S+ GG G+ S D D+RFY+KTM+VLFDLPDF+ +SA++LLAVVWAEA+LQSR+HWLS+ +YKRQLLLGYM+FN+ LYAGQ++LY LLFLP F++S VL+ +YL +T+VN LLP+LL +LF YLTC FSGFP+KS A+ R+ +VGRVV+LWTAARVVW +STLTAVLE+ R+ G TSL++++YS++VV +FL TEL+P + +LD+++L+ ++G E G G Sbjct: 18 LLYGATFLHALGKLRMLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSV--GGDGSSSRRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRVGRVVMLWTAARVVWGLSTLTAVLEFQRLVGSATSLREQVYSILVVTLFLTTELYPLLGALDDELLLALSGAEDAAPKVGGGG 301
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A835Z1P3_9STRA (DUF1084 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P3_9STRA) HSP 1 Score: 239 bits (609), Expect = 3.780e-71 Identity = 135/274 (49.27%), Postives = 187/274 (68.25%), Query Frame = 1 Query: 412 AAAKLRMLHRYSPS-LDTKKLFAMSVLLSCLTRTMGFVTIG--ALNIQSIRIG------GRGTLSATRPED----PDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMI 1194 A++KL + + S L+T+KLF M++LL+C+TR MGFVTIG ALN+QSIR+G G A +D DQRFYDK ++VLFD PDF+++SA+ LLAVVWAEA+L SR HWLS+ Y++ L+ Y+VFNA LY Q++LY LFLP ++Y LTTVNF LP+LL LF+YLT +FSGFP+++ + +R GR +L+WTA RV W LTA L+Y+ + + K +YSV++V +FLVTEL+PF +LD+DVL ++ Sbjct: 24 ASSKLSKMRKASTGGLNTEKLFVMTMLLACVTRVMGFVTIGECALNLQSIRVGYDPHRHDGGDSGADDDDDYRQDSDQRFYDKCVLVLFDFPDFVALSAYALLAVVWAEAFLASRSHWLSARRYRQGFLMAYLVFNAALYMAQLLLYGALFLPSSPTGWAARALYAALTTVNFGLPLLLAALFMYLTVSFSGFPYRTERALRRQALAGRALLIWTAGRVCWGAFALTAALQYSLAASSAAEKAAIYSVLIVALFLVTELWPFAAALDDDVLAVV 297
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: W7TTU2_9STRA (DUF1084 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTU2_9STRA) HSP 1 Score: 224 bits (571), Expect = 2.040e-64 Identity = 122/268 (45.52%), Postives = 185/268 (69.03%), Query Frame = 1 Query: 415 AAKLRMLHRYSPSLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGTLSATRP-------EDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIA 1197 +++LR LH P ++T KLF +SVLLSC R + F+ +GA ++QSI I + A+ P +DPD +FY+K +++LF+LPDF+ +SA+ LLA+VWAEA++QSR HWLS ++R LL Y+VFNA LY GQ+VLY LLFLP ++ + I+LTL +NF LPI+L+LLF YL+ F+GFP+KS + +L+K+ +V+ WT R++W + LT++L+ +S +Q +YSVV+V +FL+TEL PF V++D +L ++ Sbjct: 26 SSRLRNLHTRHPEMNTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIAIDNDASGRASSPSSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHGNQDFLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQ-GWLSDAHKDRQ-VYSVVLVGLFLITELIPFFVAMDVSLLASLS 291
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7S1U079_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U079_9STRA) HSP 1 Score: 186 bits (472), Expect = 2.840e-50 Identity = 100/261 (38.31%), Postives = 171/261 (65.52%), Query Frame = 1 Query: 418 AKLRMLHRYS-PSLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGTLSATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIA 1197 ++L+MLH + +LDT+KLF +++LL+C+ RT+ FV + +L +QSI GG T D D+ FY+K ++V+FDLPD+ ++A+ LL +V+AE +L +R+HWL +R+ ++ Y+ N+VLY Q+ LY LLF+P+ +S+++ +++TL ++F LPI + + + YLT FS FP++S + KR+ KVG V+ +WT R +W + L + S T+ YS V++ +F+ TEL PF+++LD ++L ++A Sbjct: 29 SRLKMLHAITGQALDTQKLFVVTLLLTCVLRTLSFVGLTSLAVQSIEYGGDDN-DDTGERDEDEEFYEKAVLVMFDLPDYTIVTAYLLLVIVYAETFLHARRHWLDPIQMRRRWVVWYLGANSVLYGVQITLYTLLFVPRVPQSLLIQLLFITLGAISFCLPIAVAIGYFYLTYRFSAFPYRSQHAAKRVKKVGLVMKVWTVGRFIWGCFAVFFSLSFVSTSNDTA-----YSTVLICLFVCTELIPFLLALDTEILNVLA 283
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7S1U7L3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7L3_9STRA) HSP 1 Score: 187 bits (475), Expect = 3.360e-50 Identity = 114/281 (40.57%), Postives = 179/281 (63.70%), Query Frame = 1 Query: 418 AKLRMLHRYSPS--LDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGTLS--ATRPEDPDQR-------FYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVL-EYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIAGHEQGGASE 1224 +KLR +YS S LDT+KL A S+ C+ R + F+TI +N + +G G+ + AT ++ Q+ F++K+M+VLFDLPD++ ++ FTLL +VWAE +L SR HWLSS ++R+ L+GY+VFNA +YA Q+VLY+LLF+P + ++ ++ +NF +PI + + +YL C F+ FP+K V S+ L + RVV+ WT RV+WA++ ++A + ++ G+S E Y+VV+V VF +TEL PF V+L+ D L ++A E SE Sbjct: 28 SKLRKFLKYSGSKLLDTRKLLAASMFFVCVFRCLTFITIALVNRRGYALGFHGSSNPVATVVQEGPQKLRQANLDFFEKSMLVLFDLPDYMIVTTFTLLVLVWAEVFLDSRAHWLSSKTFRRRALIGYLVFNATVYATQLVLYSLLFVPTISTKGLRVLLFCSVAVLNFFVPITFLGVAIYLYCQFAAFPYKGVRSRLALERTTRVVIWWTGGRVLWAMTAVSAGMRDWLTNWSGSS---EFYAVVLVAVFGLTELMPFSVALEPDFLPILAIAEGLETSE 305
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7R9VVQ9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVQ9_9STRA) HSP 1 Score: 158 bits (400), Expect = 9.470e-40 Identity = 105/280 (37.50%), Postives = 164/280 (58.57%), Query Frame = 1 Query: 412 AAAKLRMLHRYSP-SLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIR----IGGRGTL----SATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIAGHEQGGASE 1224 A KL L+R S L TKKL +SV L C R M F+ + A++I ++R + T S+T D +Q+FYD V+FDLP+ + +S F LL +VWAE +LQSR H S++ ++ + L GYM+FNA+LY Q++LY L+ LP K +V +Y T +NF +L++ L++YL+ +FSGFPF+S+ K+ L K+ V+ LW+ +RVVW + L ++ + + + +VV+ +FL E+ P VV LD + M+ G E G + + Sbjct: 57 ATRKLAFLNRVSGRELSTKKLLVLSVGLVCAIRIMSFIGVAAMDIANVRAHYSLKPTSTTDRNGSSTARMDRNQKFYDAAFTVMFDLPNVVVVSTFVLLTLVWAECFLQSRFHTESAAKWQMRWLTGYMLFNALLYGTQIILYVLVILPVTAK-IVRTVLYALSTGINFAAVVLVLGLYIYLSLSFSGFPFRSIHLKESLRKISNVMALWSLSRVVWGSAMLVIYMKNVELLQDSK-TPVVSAVVLFFLFLFCEITPIVVMLDYSYMNMV-GFESGASRD 333
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A6V2BXQ0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BXQ0_9STRA) HSP 1 Score: 156 bits (395), Expect = 2.180e-39 Identity = 104/283 (36.75%), Postives = 165/283 (58.30%), Query Frame = 1 Query: 412 AAAKLRMLHRYSP-SLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIR-----------IGGRGTLSATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIAGHEQGGASE 1224 A KL L++ +P L+T+KL +SV C+ R M F+ + +++ ++R I T++ P D +Q FYD +M VLFDLP+ I +S + LL +VW E +LQSR H + SS Y + L+GYM+FN +LY+ Q+VLY L+FLP K+VV +Y+ +TT N + +L+ + ++YL+ FSGFP +S+ L K+ V+ LW+A+R+ WA +TL A L + S S+V+ ++F+ E+ P V LD L MI ++G + + Sbjct: 38 ARRKLLALNKNNPYDLNTQKLLVVSVATVCILRIMSFIGVALMDVANVRAHYALQPTGYHIHTNSTIA--EPRDKNQSFYDSSMTVLFDLPNAIVVSTYVLLTLVWVECFLQSRFHTMDSSHYHSRGLVGYMIFNIILYSIQMVLYVLIFLPGV-KNVVRTVLYVVMTTTNLVAVLLVFVFYVYLSVAFSGFPPRSLHLLASLRKISNVMTLWSASRIAWAGATLAAFLNDIELLQD-SRSPVWSSLVLFLLFVFCEILPIVTLLDYSYLSMIT-FDKGASRD 315
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7S4QPE0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QPE0_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.960e-39 Identity = 103/273 (37.73%), Postives = 160/273 (58.61%), Query Frame = 1 Query: 412 AAAKLRMLHRYSP-SLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIR-----------IGGRGTLSATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMI 1194 A KL L++ +P L+T+KL +SV C+ R M F+ + +++ ++R I T++ P D +Q FYD +M VLFDLP+ I +S + LL +VW E +LQSR H + SS Y + L+GYM+FN +LY+ Q+VLY L+FLP K+VV +Y+ +TT N + +L+ + ++YL+ FSGFP +S+ L K+ V+ LW+A+R+ WA +TL A L + S S+V+ ++F+ E+ P V LD L MI Sbjct: 38 ARRKLLALNKNNPYDLNTQKLLVVSVATVCILRIMSFIGVALMDVANVRAHYALQPTGYHIHTNSTIA--EPRDKNQSFYDSSMTVLFDLPNAIVVSTYVLLTLVWVECFLQSRFHTMDSSHYHSRGLVGYMIFNIILYSIQMVLYVLIFLPGV-KNVVRTVLYVVMTTTNLVAVLLVFVFYVYLSVAFSGFPPRSLHLLASLRKISNVMTLWSASRIAWAGATLAAFLNDIELLQD-SRSPVWSSLVLFLLFVFCEILPIVTLLDYSYLSMI 306
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7S0PTK0_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PTK0_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.760e-37 Identity = 105/282 (37.23%), Postives = 159/282 (56.38%), Query Frame = 1 Query: 424 LRMLHRYSPSLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGTLS-------ATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYS-----VVVVMVFLVTELFPFVVSLDNDVLMMIAGHEQGGASEGPV 1233 L++ HR + TKKL +SV L C R M + + A+NI ++R +L +T E DQ+FYDK M VLFDLP+ I +S + LL +VWAE +L+SR H S+ +KR L YMVFNA+LYA Q+VLY +F KSV IY +T +NF +++++ +LYL+ NFSGFPF+S ++ K+ RV+ LW+ R+VW ++TL + L Q+ ++ +V++++F E+ P + LD + I SEGP+ Sbjct: 39 LKLRHR---EMGTKKLLVLSVGLVCAVRIMTILGVVAMNIANVR--AHYSLQPTDLYYVSTTTEAKDQKFYDKAMTVLFDLPNCIVVSTYALLTLVWAECFLESRFHTESTLAWKRSGLKCYMVFNALLYATQLVLYTCIFFVPSVKSV-RTIIYAAITGINFTAVLIVLIFYLYLSVNFSGFPFRSQQLRESYSKLSRVMGLWSLTRIVWGIATLLVFIY------NIELLQDSHTPVWSFLVLLLLFFGCEIIPIIAMLDRSYISFIGFDSV--PSEGPL 306
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7S2SVF8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF8_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.380e-35 Identity = 99/279 (35.48%), Postives = 160/279 (57.35%), Query Frame = 1 Query: 451 SLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGT---LSATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDK--SVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTL-TAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIAGHE----QGGASEGPVG*DLTFGI 1257 ++DT +LFA+SV +C+ R+ +V + L+ Q + + T + T ED D F + + VLFDLPDFI +SA+ LL + WAE+ + SR HWLS +++R L + Y+V N +LY Q+VLY L+FL D S +L I L+ +N+ LP L ++Y T FSGFP++S + + R++ +WT R++W + TL TA+ +A + G Q L ++ V+V L++E PF+++LD+ L ++A Q A +G D +F + Sbjct: 43 AIDTVRLFALSVFGACVLRSASWVGLACLSYQHVELPSGSTPLHIKETNAEDDDVAFVESAVFVLFDLPDFIVLSAYMLLGLAWAESMVTSRLHWLSDRVHQRTLRISYLVVNILLYLTQLVLYGLIFLNSTDNTSSKLLDFI---LSGMNWGLPFLFTSFWIYCTIRFSGFPWRSPHHRAKFAIASRMMWVWTFGRLLWGLCTLSTALSSFATLLGDAD--QRLRVLLFVVVVLLSEAVPFILALDSGFLHVLADSSSMLFQYTAVKGDEADDESFSV 316 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9154.1.1 >prot_C-tenellus_contig9154.1.1 ID=prot_C-tenellus_contig9154.1.1|Name=mRNA_C-tenellus_contig9154.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=281bp MAFFHAAAKLRMLHRYSPSLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQback to top mRNA from alignment at C-tenellus_contig9154:634..6031- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9154.1.1 ID=mRNA_C-tenellus_contig9154.1.1|Name=mRNA_C-tenellus_contig9154.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5398bp|location=Sequence derived from alignment at C-tenellus_contig9154:634..6031- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9154:634..6031- >mRNA_C-tenellus_contig9154.1.1 ID=mRNA_C-tenellus_contig9154.1.1|Name=mRNA_C-tenellus_contig9154.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=843bp|location=Sequence derived from alignment at C-tenellus_contig9154:634..6031- (Choristocarpus tenellus KU2346)back to top |