mRNA_C-tenellus_contig9154.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9154.1.1
Unique NamemRNA_C-tenellus_contig9154.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: D7FRE0_ECTSI (DUF1084 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRE0_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 2.820e-105
Identity = 176/286 (61.54%), Postives = 229/286 (80.07%), Query Frame = 1
Query:  385 LIVQMAFFHAAAKLRMLHRYSPSLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGTLSATR-PEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGG-TSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIAGHEQGGASEGPVG 1236
            L+    F HA  KLRMLH  S SLDTKKLFAMSVLL CLTRTMGF+TIGALN++S+  GG G+ S      D D+RFY+KTM+VLFDLPDF+ +SA++LLAVVWAEA+LQSR+HWLS+ +YKRQLLLGYM+FN+ LYAGQ++LY LLFLP F++S VL+ +YL +T+VN LLP+LL +LF YLTC FSGFP+KS A+  R+ +VGRVV+LWTAARVVW +STLTAVLE+ R+ G  TSL++++YS++VV +FL TEL+P + +LD+++L+ ++G E      G  G
Sbjct:   18 LLYGATFLHALGKLRMLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSV--GGDGSSSRRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRVGRVVMLWTAARVVWGLSTLTAVLEFQRLVGSATSLREQVYSILVVTLFLTTELYPLLGALDDELLLALSGAEDAAPKVGGGG 301          
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A835Z1P3_9STRA (DUF1084 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P3_9STRA)

HSP 1 Score: 239 bits (609), Expect = 3.780e-71
Identity = 135/274 (49.27%), Postives = 187/274 (68.25%), Query Frame = 1
Query:  412 AAAKLRMLHRYSPS-LDTKKLFAMSVLLSCLTRTMGFVTIG--ALNIQSIRIG------GRGTLSATRPED----PDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMI 1194
            A++KL  + + S   L+T+KLF M++LL+C+TR MGFVTIG  ALN+QSIR+G        G   A   +D     DQRFYDK ++VLFD PDF+++SA+ LLAVVWAEA+L SR HWLS+  Y++  L+ Y+VFNA LY  Q++LY  LFLP         ++Y  LTTVNF LP+LL  LF+YLT +FSGFP+++  + +R    GR +L+WTA RV W    LTA L+Y+  +   + K  +YSV++V +FLVTEL+PF  +LD+DVL ++
Sbjct:   24 ASSKLSKMRKASTGGLNTEKLFVMTMLLACVTRVMGFVTIGECALNLQSIRVGYDPHRHDGGDSGADDDDDYRQDSDQRFYDKCVLVLFDFPDFVALSAYALLAVVWAEAFLASRSHWLSARRYRQGFLMAYLVFNAALYMAQLLLYGALFLPSSPTGWAARALYAALTTVNFGLPLLLAALFMYLTVSFSGFPYRTERALRRQALAGRALLIWTAGRVCWGAFALTAALQYSLAASSAAEKAAIYSVLIVALFLVTELWPFAAALDDDVLAVV 297          
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: W7TTU2_9STRA (DUF1084 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTU2_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.040e-64
Identity = 122/268 (45.52%), Postives = 185/268 (69.03%), Query Frame = 1
Query:  415 AAKLRMLHRYSPSLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGTLSATRP-------EDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIA 1197
            +++LR LH   P ++T KLF +SVLLSC  R + F+ +GA ++QSI I    +  A+ P       +DPD +FY+K +++LF+LPDF+ +SA+ LLA+VWAEA++QSR HWLS   ++R  LL Y+VFNA LY GQ+VLY LLFLP  ++  +   I+LTL  +NF LPI+L+LLF YL+  F+GFP+KS  +  +L+K+ +V+  WT  R++W +  LT++L+   +S     +Q +YSVV+V +FL+TEL PF V++D  +L  ++
Sbjct:   26 SSRLRNLHTRHPEMNTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIAIDNDASGRASSPSSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHGNQDFLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKISKVMAWWTIGRIIWGIVVLTSILQ-GWLSDAHKDRQ-VYSVVLVGLFLITELIPFFVAMDVSLLASLS 291          
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7S1U079_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U079_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.840e-50
Identity = 100/261 (38.31%), Postives = 171/261 (65.52%), Query Frame = 1
Query:  418 AKLRMLHRYS-PSLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGTLSATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIA 1197
            ++L+MLH  +  +LDT+KLF +++LL+C+ RT+ FV + +L +QSI  GG      T   D D+ FY+K ++V+FDLPD+  ++A+ LL +V+AE +L +R+HWL     +R+ ++ Y+  N+VLY  Q+ LY LLF+P+  +S+++  +++TL  ++F LPI + + + YLT  FS FP++S  + KR+ KVG V+ +WT  R +W    +   L +   S  T+     YS V++ +F+ TEL PF+++LD ++L ++A
Sbjct:   29 SRLKMLHAITGQALDTQKLFVVTLLLTCVLRTLSFVGLTSLAVQSIEYGGDDN-DDTGERDEDEEFYEKAVLVMFDLPDYTIVTAYLLLVIVYAETFLHARRHWLDPIQMRRRWVVWYLGANSVLYGVQITLYTLLFVPRVPQSLLIQLLFITLGAISFCLPIAVAIGYFYLTYRFSAFPYRSQHAAKRVKKVGLVMKVWTVGRFIWGCFAVFFSLSFVSTSNDTA-----YSTVLICLFVCTELIPFLLALDTEILNVLA 283          
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7S1U7L3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7L3_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.360e-50
Identity = 114/281 (40.57%), Postives = 179/281 (63.70%), Query Frame = 1
Query:  418 AKLRMLHRYSPS--LDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGTLS--ATRPEDPDQR-------FYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVL-EYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIAGHEQGGASE 1224
            +KLR   +YS S  LDT+KL A S+   C+ R + F+TI  +N +   +G  G+ +  AT  ++  Q+       F++K+M+VLFDLPD++ ++ FTLL +VWAE +L SR HWLSS  ++R+ L+GY+VFNA +YA Q+VLY+LLF+P      +   ++ ++  +NF +PI  + + +YL C F+ FP+K V S+  L +  RVV+ WT  RV+WA++ ++A + ++     G+S   E Y+VV+V VF +TEL PF V+L+ D L ++A  E    SE
Sbjct:   28 SKLRKFLKYSGSKLLDTRKLLAASMFFVCVFRCLTFITIALVNRRGYALGFHGSSNPVATVVQEGPQKLRQANLDFFEKSMLVLFDLPDYMIVTTFTLLVLVWAEVFLDSRAHWLSSKTFRRRALIGYLVFNATVYATQLVLYSLLFVPTISTKGLRVLLFCSVAVLNFFVPITFLGVAIYLYCQFAAFPYKGVRSRLALERTTRVVIWWTGGRVLWAMTAVSAGMRDWLTNWSGSS---EFYAVVLVAVFGLTELMPFSVALEPDFLPILAIAEGLETSE 305          
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7R9VVQ9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVQ9_9STRA)

HSP 1 Score: 158 bits (400), Expect = 9.470e-40
Identity = 105/280 (37.50%), Postives = 164/280 (58.57%), Query Frame = 1
Query:  412 AAAKLRMLHRYSP-SLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIR----IGGRGTL----SATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIAGHEQGGASE 1224
            A  KL  L+R S   L TKKL  +SV L C  R M F+ + A++I ++R    +    T     S+T   D +Q+FYD    V+FDLP+ + +S F LL +VWAE +LQSR H  S++ ++ + L GYM+FNA+LY  Q++LY L+ LP   K +V   +Y   T +NF   +L++ L++YL+ +FSGFPF+S+  K+ L K+  V+ LW+ +RVVW  + L   ++   +   +     + +VV+  +FL  E+ P VV LD   + M+ G E G + +
Sbjct:   57 ATRKLAFLNRVSGRELSTKKLLVLSVGLVCAIRIMSFIGVAAMDIANVRAHYSLKPTSTTDRNGSSTARMDRNQKFYDAAFTVMFDLPNVVVVSTFVLLTLVWAECFLQSRFHTESAAKWQMRWLTGYMLFNALLYGTQIILYVLVILPVTAK-IVRTVLYALSTGINFAAVVLVLGLYIYLSLSFSGFPFRSIHLKESLRKISNVMALWSLSRVVWGSAMLVIYMKNVELLQDSK-TPVVSAVVLFFLFLFCEITPIVVMLDYSYMNMV-GFESGASRD 333          
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A6V2BXQ0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BXQ0_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.180e-39
Identity = 104/283 (36.75%), Postives = 165/283 (58.30%), Query Frame = 1
Query:  412 AAAKLRMLHRYSP-SLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIR-----------IGGRGTLSATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIAGHEQGGASE 1224
            A  KL  L++ +P  L+T+KL  +SV   C+ R M F+ +  +++ ++R           I    T++   P D +Q FYD +M VLFDLP+ I +S + LL +VW E +LQSR H + SS Y  + L+GYM+FN +LY+ Q+VLY L+FLP   K+VV   +Y+ +TT N +  +L+ + ++YL+  FSGFP +S+     L K+  V+ LW+A+R+ WA +TL A L    +    S      S+V+ ++F+  E+ P V  LD   L MI   ++G + +
Sbjct:   38 ARRKLLALNKNNPYDLNTQKLLVVSVATVCILRIMSFIGVALMDVANVRAHYALQPTGYHIHTNSTIA--EPRDKNQSFYDSSMTVLFDLPNAIVVSTYVLLTLVWVECFLQSRFHTMDSSHYHSRGLVGYMIFNIILYSIQMVLYVLIFLPGV-KNVVRTVLYVVMTTTNLVAVLLVFVFYVYLSVAFSGFPPRSLHLLASLRKISNVMTLWSASRIAWAGATLAAFLNDIELLQD-SRSPVWSSLVLFLLFVFCEILPIVTLLDYSYLSMIT-FDKGASRD 315          
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7S4QPE0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QPE0_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.960e-39
Identity = 103/273 (37.73%), Postives = 160/273 (58.61%), Query Frame = 1
Query:  412 AAAKLRMLHRYSP-SLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIR-----------IGGRGTLSATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMI 1194
            A  KL  L++ +P  L+T+KL  +SV   C+ R M F+ +  +++ ++R           I    T++   P D +Q FYD +M VLFDLP+ I +S + LL +VW E +LQSR H + SS Y  + L+GYM+FN +LY+ Q+VLY L+FLP   K+VV   +Y+ +TT N +  +L+ + ++YL+  FSGFP +S+     L K+  V+ LW+A+R+ WA +TL A L    +    S      S+V+ ++F+  E+ P V  LD   L MI
Sbjct:   38 ARRKLLALNKNNPYDLNTQKLLVVSVATVCILRIMSFIGVALMDVANVRAHYALQPTGYHIHTNSTIA--EPRDKNQSFYDSSMTVLFDLPNAIVVSTYVLLTLVWVECFLQSRFHTMDSSHYHSRGLVGYMIFNIILYSIQMVLYVLIFLPGV-KNVVRTVLYVVMTTTNLVAVLLVFVFYVYLSVAFSGFPPRSLHLLASLRKISNVMTLWSASRIAWAGATLAAFLNDIELLQD-SRSPVWSSLVLFLLFVFCEILPIVTLLDYSYLSMI 306          
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7S0PTK0_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PTK0_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.760e-37
Identity = 105/282 (37.23%), Postives = 159/282 (56.38%), Query Frame = 1
Query:  424 LRMLHRYSPSLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGTLS-------ATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKSVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYS-----VVVVMVFLVTELFPFVVSLDNDVLMMIAGHEQGGASEGPV 1233
            L++ HR    + TKKL  +SV L C  R M  + + A+NI ++R     +L        +T  E  DQ+FYDK M VLFDLP+ I +S + LL +VWAE +L+SR H  S+  +KR  L  YMVFNA+LYA Q+VLY  +F     KSV    IY  +T +NF   +++++ +LYL+ NFSGFPF+S   ++   K+ RV+ LW+  R+VW ++TL   +          L Q+ ++     +V++++F   E+ P +  LD   +  I        SEGP+
Sbjct:   39 LKLRHR---EMGTKKLLVLSVGLVCAVRIMTILGVVAMNIANVR--AHYSLQPTDLYYVSTTTEAKDQKFYDKAMTVLFDLPNCIVVSTYALLTLVWAECFLESRFHTESTLAWKRSGLKCYMVFNALLYATQLVLYTCIFFVPSVKSV-RTIIYAAITGINFTAVLIVLIFYLYLSVNFSGFPFRSQQLRESYSKLSRVMGLWSLTRIVWGIATLLVFIY------NIELLQDSHTPVWSFLVLLLLFFGCEIIPIIAMLDRSYISFIGFDSV--PSEGPL 306          
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Match: A0A7S2SVF8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF8_9STRA)

HSP 1 Score: 147 bits (370), Expect = 3.380e-35
Identity = 99/279 (35.48%), Postives = 160/279 (57.35%), Query Frame = 1
Query:  451 SLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQSIRIGGRGT---LSATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWAEAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDK--SVVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVGRVVLLWTAARVVWAVSTL-TAVLEYARVSGGTSLKQELYSVVVVMVFLVTELFPFVVSLDNDVLMMIAGHE----QGGASEGPVG*DLTFGI 1257
            ++DT +LFA+SV  +C+ R+  +V +  L+ Q + +    T   +  T  ED D  F +  + VLFDLPDFI +SA+ LL + WAE+ + SR HWLS  +++R L + Y+V N +LY  Q+VLY L+FL   D   S +L  I   L+ +N+ LP L    ++Y T  FSGFP++S   + +     R++ +WT  R++W + TL TA+  +A + G     Q L  ++ V+V L++E  PF+++LD+  L ++A       Q  A +G    D +F +
Sbjct:   43 AIDTVRLFALSVFGACVLRSASWVGLACLSYQHVELPSGSTPLHIKETNAEDDDVAFVESAVFVLFDLPDFIVLSAYMLLGLAWAESMVTSRLHWLSDRVHQRTLRISYLVVNILLYLTQLVLYGLIFLNSTDNTSSKLLDFI---LSGMNWGLPFLFTSFWIYCTIRFSGFPWRSPHHRAKFAIASRMMWVWTFGRLLWGLCTLSTALSSFATLLGDAD--QRLRVLLFVVVVLLSEAVPFILALDSGFLHVLADSSSMLFQYTAVKGDEADDESFSV 316          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9154.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRE0_ECTSI2.820e-10561.54DUF1084 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835Z1P3_9STRA3.780e-7149.27DUF1084 domain-containing protein (Fragment) n=1 T... [more]
W7TTU2_9STRA2.040e-6445.52DUF1084 domain-containing protein n=2 Tax=Monodops... [more]
A0A7S1U079_9STRA2.840e-5038.31Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1U7L3_9STRA3.360e-5040.57Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9VVQ9_9STRA9.470e-4037.50Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6V2BXQ0_9STRA2.180e-3936.75Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4QPE0_9STRA2.960e-3937.73Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0PTK0_9STRA2.760e-3737.23Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S2SVF8_9STRA3.380e-3535.48Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9154contigC-tenellus_contig9154:634..6031 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FRE0
PFAMsDUF1084
Model size1260
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons8
Evalue8.22e-109
EggNOG OGs28PC9@1|root,2QVZM@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-21_002580.1
Cds size843
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9154.1.1prot_C-tenellus_contig9154.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9154 1009..5635 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790150.4341657-UTR-C-tenellus_contig9154:633..10081680790150.4341657-UTR-C-tenellus_contig9154:633..1008Choristocarpus tenellus KU2346UTRC-tenellus_contig9154 634..1008 -
1680790150.5263839-UTR-C-tenellus_contig9154:5989..60311680790150.5263839-UTR-C-tenellus_contig9154:5989..6031Choristocarpus tenellus KU2346UTRC-tenellus_contig9154 5990..6031 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790150.4474826-CDS-C-tenellus_contig9154:1008..11431680790150.4474826-CDS-C-tenellus_contig9154:1008..1143Choristocarpus tenellus KU2346CDSC-tenellus_contig9154 1009..1143 -
1680790150.457224-CDS-C-tenellus_contig9154:1715..18291680790150.457224-CDS-C-tenellus_contig9154:1715..1829Choristocarpus tenellus KU2346CDSC-tenellus_contig9154 1716..1829 -
1680790150.4676464-CDS-C-tenellus_contig9154:2442..25891680790150.4676464-CDS-C-tenellus_contig9154:2442..2589Choristocarpus tenellus KU2346CDSC-tenellus_contig9154 2443..2589 -
1680790150.4821494-CDS-C-tenellus_contig9154:2993..31251680790150.4821494-CDS-C-tenellus_contig9154:2993..3125Choristocarpus tenellus KU2346CDSC-tenellus_contig9154 2994..3125 -
1680790150.4917057-CDS-C-tenellus_contig9154:3653..37341680790150.4917057-CDS-C-tenellus_contig9154:3653..3734Choristocarpus tenellus KU2346CDSC-tenellus_contig9154 3654..3734 -
1680790150.505134-CDS-C-tenellus_contig9154:4477..45781680790150.505134-CDS-C-tenellus_contig9154:4477..4578Choristocarpus tenellus KU2346CDSC-tenellus_contig9154 4478..4578 -
1680790150.5149584-CDS-C-tenellus_contig9154:5502..56351680790150.5149584-CDS-C-tenellus_contig9154:5502..5635Choristocarpus tenellus KU2346CDSC-tenellus_contig9154 5503..5635 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9154.1.1

>prot_C-tenellus_contig9154.1.1 ID=prot_C-tenellus_contig9154.1.1|Name=mRNA_C-tenellus_contig9154.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=281bp
MAFFHAAAKLRMLHRYSPSLDTKKLFAMSVLLSCLTRTMGFVTIGALNIQ
SIRIGGRGTLSATRPEDPDQRFYDKTMMVLFDLPDFISISAFTLLAVVWA
EAYLQSRKHWLSSSLYKRQLLLGYMVFNAVLYAGQVVLYALLFLPKFDKS
VVLASIYLTLTTVNFLLPILLVLLFLYLTCNFSGFPFKSVASKKRLHKVG
RVVLLWTAARVVWAVSTLTAVLEYARVSGGTSLKQELYSVVVVMVFLVTE
LFPFVVSLDNDVLMMIAGHEQGGASEGPVG*
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mRNA from alignment at C-tenellus_contig9154:634..6031-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9154.1.1 ID=mRNA_C-tenellus_contig9154.1.1|Name=mRNA_C-tenellus_contig9154.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5398bp|location=Sequence derived from alignment at C-tenellus_contig9154:634..6031- (Choristocarpus tenellus KU2346)
CAGCTTGGGGCTGCACCGGTTCTCCTTTCCCTCCTGTACCTGGTGAGGTT ATGTAATACCCGGAAGGGTTGACTCACTTGTAATCAATAAACGCCCCTGT TCTATCCAAACACGTATCTACGGACAGGAAAAATGATAAATTATTGGAAA CAAGCTGTTTCCTGCCACAGCGAGGCAATGATTAGATCGACTGGTGGTAG TCATCATCCACCAAAGAAATATAATGGATGTATACGGATCAATTGGATTC GCTCTAAGATGCCATAGCTTTCCTGAGGACCCTGCCTTCAAAATTTGTTG TGTTGCAGTTTGTGTGCGACAACCTCGTGCCAAACTGCACAGAACCGACT TAAGCCCTGGTTGTATGTTATCTAATGATATATTTTAATCGTGCAGATGG CCTTCTTTCACGCCGCGGCCAAGCTACGTATGTTACACCGCTACTCACCA TCCCTGGACACGAAGAAACTGTTTGCTATGAGTGTGTTGCTATCGTGTCT GACAAGGACCATGGGCTTCGTTACCATCGGTAAGGGGAATGCAACTGATT CGTGATTTTCTCCCCATAACCAGAATATTACTGAGGTTTAGTCCCAAGAT TATGGACGTTTAATTGTTGTTGATGCATCATTGCGTCACGGTTAGTACTG TCATCGACTTGTGCGACTCACTGCATAGGAAAATCCTGTTATAGCCAGCT TCACAGTATCTACGGTGGTGCCTGAGAAAGTGTGATGGCACTGAGATAAG CTCAAAATGAATGTAACGATAGAAGTCGTTATCCGCCTCCGTGCTTTTTA ATTTGGTTCCTCGACGGCCCCGCTTTGGGTATAGGCAGCTTTACAAGTTT TACTGAAAAGTGTCGCCATAGTAAAGGTAACATCGTTTTCGGTCATGGGT ACGATGGATCTGAGTGAAGGTACCTCAGAGGGTAAGAGTTTTTCCCTGTT TGTCCATTTCGGGCTTGACTTTCCGGGTTCTTTTATGCTTTTTCCTACTC CAAAATATTTGCACTTCTTAACAAACATGATAGCCAAAATTTAATCAAAA TCGCAACATTGGATTTTGGTCCCCAAATGGACACGGCTCTACCCTCTAAG ATACTTTGGCTCTCTCCTACGACAAGGAAGGTGAAGGCAAGGAATTTTCT TACGGTCTCTTTCTTATCTGGATGTCACTGACAGGGTACAAGATACTCCT GGTCTCTGCTGCACTGTTTAAGTTTGAGAAACCCTGACAACAAAGGCCGT TGTATCACAGCCTCGTTCCTAGGACAGGGAAAGAAAATATTTCTTGCATA AATGCTACTTCTATCGCCTATCATGAAGGTTTATGCTGGGCAAACAAGGC TGGCCTCCATTCTCCGTCCACATCCCTACATCGGCATGTGCACTCACTTC TCTTTGACTTCCCAACTCCTTCCTTCATGTTGCTAACACCAAAACAAGCT CAGGTGCACTCAACATTCAGAGCATTCGTATCGGTGGTAGGGGTACCTTG AGTGCTACCAGGCCAGAAGACCCTGATCAGAGGTTCTATGACAAGACCAT GATGGTGAGCTATTTTCAACAGTGCTTCCAAATCCGGGATGAACATAGCC ATAATGGCGTAGGTCATAGTATTTGGATGGTAAATCGTAGGTTGCTGCAG ACTGTATATCAGGAGGTTGGCGAGTTGGTATGACAGCATGAGGTATATCA ATGATGTTATAAGGGTAATCCATCATTCAGTCATCAATTCATCTTGCAGC CACACTGCACTTCAACAACTGAAACGCAACCCCGTTCCCATTCCTGTTTA AAACATGAGAAGGTTTAGGCAGTTTTACTGTATCATCACCAGCAGTTTGG GAACAAAGGGGAGGTCAAGTGATGGTAGCTGTGATGATTGGGGGAGAGAC ATCTACCGTACACAGGGGTTAGAATTGACTGCAGGGTTTGGTTTTGACTG TATGGTGTACTTCATATATTTTTTCAATAGAGGGTTACCTCAAGATTACA TTGTGGTTGTGATGTACTACAAAACAGGCCTTTCTCCCTCCTTGAAGGTC TCATTGTTTTTGAAGTTGCCAAAAATATGTCTTCAATTTGTGAATCCCCC CAATAGCTGAGGTCACCATTTTGCAGCGTGGATAATACTGGTGTATCTCC TCCTATTTTTATCCATCCTGCCAGGGTTCATTAATCATTTTTAACCCTCC CTGATCACCTTGGTGGTCGTTGATTGCCTTCAAAGCCTTGAGGTTACACA ATTGCCATTTGATGTGTGTGCAATGGTGTGTTGGTGTGAACACGCAGGTC CTCTTTGACCTGCCAGACTTCATCAGCATTAGTGCCTTCACACTACTGGC AGTGGTGTGGGCAGAAGCTTACCTACAGGTGACTTCAAAAATATCTCCAA CTCCAAAAACGTACTTTGAAGAATAGAGTATGGTGTTGCTATTGTTTTTC AAGGTAGATCTAGTCGAGCTTTGGCAATCATCTAACCCATACCTCTCTCT ACACAGAACATCCCACTCAACACAAGGGTCCCAGTCACAGACACAATTTT GCTCCAACAGGTTATGGATTTTATTGCTTGTGCAATTTAGAGCGATTTTT TTTTTCCAGTCTGTACCTGTAGATGATACCTGGAGTGTGACCACAGTACC AAAATGTTTGACACCTGCATGGCATTCTGAATGGGTAGATTGGCATTGGA GAGTCTGCACTGTGGATACTGAATTGTATTTTACTGAGCATGAGCAAAGC CCTTCCAAACATCGTTGCATCCATCCCAACTTCAGCCCTCTCACCCCCCT TCCACACGCCCCTTGCCAACAATGCCATCGATATCGCAACAACGCCATCT GTCTCACAGCAACGCCTTCCCCTCTTGCTGACTTATTGCTTGTTGCCCCT TTTAAGTCTCGAAAGCACTGGTTGTCTTCATCGCTGTATAAGCGACAGCT TCTGCTGGGCTACATGGTGTTTAATGCAGTGTTGTATGCAGGCCAGGTGG TGCTGTATGCCTTACTCTTCTTACCCAAGTTCGATAAGGTGTATAGAGAT AAAAGTGCAGTGTGATATAATCACAGGGCAATTTCTGTTGGGTTTTCTCC CTTTTGCTGAACATGACTTTGTGGCAGCCTGGTGCGCAACCTTAGGAGCT AGGGAGAGAGGTTTTCTTTGGCGTGTCTTGGGCTTGGTGATGAAAGAGCA AGTCGCAAAACTGAACATTTGAGTAGAAAGCTTGGAATTCTGGACTCCCT CATCCCCACCAGTGCTTGTTCCAGTATTCGTCAAGAACCTAAATCCTGAA ACAGTTTTGTATGCCCTGTCCCAGCTGAAACTGTGACCTGGTGCACACTA TCTCCGCACCAACCTCCCCCCTGCCCCATGCATCCCATGCCCTGTTGTGG CTGCATCATGTTTGTCCCACATGCATTGCTATGTGCCTGCAGAGTGTTGT GTTGGCATCCATTTACCTGACACTTACAACAGTGAACTTCTTGCTGCCCA TTCTACTGGTCCTTCTTTTCCTGTACCTTACCTGCAACTTCTCCGGCTTC CCATTCAAATCTGTTGCCTCCAAGAAACGCCTGCACAAGGTGCCTATGAA GTAGAGGGGGAGGGGGAGGTCAATACTAGTAGTAGTATGGGGAGAAATGT CAGTGCCAAAAGTGCCAAAACCAAAAAATGTACTTATGGTTGAGGCGGTT GATATATAAAAATATGTATAATTGTAATGTCATACTGTCTCATCGTCGCA TTGAACAAAATGTTCTTTGATATGTCTTTTTTAGCACATTTTAAGGCTTA TCAAGTCCACTGCCGTTGACTACAGTTAAGTTTTACCGCATGTAACATCC CATCAGCCAACCCTGCTCTGAACTACAATATTTCTTCTTCATTCCTTGGT GCTACCCATTCTATGTGCCCAATTTTGGTTCCTTTAGTCTGGAATGTATC TACATCAATTCGACCAAGATTTGATCTGGTTTGATATCTGCAACTGTGTA GAAATCGCAAGCTCCTCACACTCTCTCTTCTGCTTATTGGACCTCCTATG CCCGTTCTCTTTAATCTCACCCCTCTCAGTTGCCACTTTTCATCGTTGCT CTTCCGCCTTTTGCATCCAGATCCAGATCTTTTCCTCTCCACATGAGACA TTTACCTCTTCCTCTTACAATGCCTTCCCTTCCTCTTACAATGCCTTCCC AGGTTGGGCGTGTTGTTCTCCTGTGGACAGCGGCAAGGGTAGTATGGGCT GTGTCCACCCTAACAGCAGTCTTGGAGTACGCGAGGGTATCAGGGGGGAC CAGTCTGAAACAGGAGGTTGGTTAGTTTTTTTAATTTTTCCTTTGGCATT AGTATTCATATTTTTTTTTTTAAGTAGGAAATTATGCAGTGAACAGAAGT ACTGTACCCCCTCTGTTGCGTAGAGTTTTTGTTTGATTAAAGGCGTACAC CACAGTACATTCCTGTGGTGTTTTCTAGGAGTCGAGGGTCTATGGACTTG TGCATGTCATCCCTCCTCACAGGATGAAAGAAATAAAGAAAAAAATATGT TTCGCTTCAGGAGAGTACTGCTGTGCTTGTAAAGGCGAGGGATTTGCTGT CCTCTTGGCTTGGCTCATCGGTTCTCAACTTGTACTGTACTTTTGTCCTT ACAAGGAGTGGTGCCTTCATTTCCCCCATGTTGCAGTTTAGTGCCTTGGG AATTGATCCTCCTACAATAATATCTTGATGAGGAAAACAAAAACGAGATC CTACATACGTGATTTGTCGTGGCATCCACACCTCCTCTACCCCCCCCCTG CCTGCCACTTGCTCGAAACACTTGCTTCACCTACCCCATGGTTGCATGCA TCATGATTGCACTTCCATCTCCACGTTCCCATCAAAAGCTATACTCAGTG GTGGTTGTGATGGTGTTTTTGGTGACAGAGCTCTTTCCCTTTGTGGTCTC CCTGGACAATGACGTCCTGATGATGATAGCAGGCCATGAGCAAGGAGGGG CTTCTGAGGGTCCTGTGGGGTGAGACCTTACATTCGGTATATTTAAAATT TAAGTTTATTTTAATTTGATTCAATGTGATGGTTTGGTACTCCATATGCT GTTAGTGCTATGATTTGTAACTGACATTAGATGGTGAAAAGGAAAGAGTA GAGATTGTGGAGGATACACACATAGGGTTTGGATATGGAGGAGTGATGGG ATTAGTGTGGCTTTATTGGGGGTGGTTTGGAATGTGGAATATTCCGGACA ATATAAGACTAAACCCGGCAGAGCAAGAGAGGTGGTCGTTTGGCATGTTT ATGGTTAAAGGACAGTTGTACAAATAGATACAGGGCTCAGGTATTTGTGT AGGGGTCCATGTAGTATCCTACAAGAGGATCACGCAGATTGCTCAAGG
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Coding sequence (CDS) from alignment at C-tenellus_contig9154:634..6031-

>mRNA_C-tenellus_contig9154.1.1 ID=mRNA_C-tenellus_contig9154.1.1|Name=mRNA_C-tenellus_contig9154.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=843bp|location=Sequence derived from alignment at C-tenellus_contig9154:634..6031- (Choristocarpus tenellus KU2346)
ATGGCCTTCTTTCACGCCGCGGCCAAGCTACGTATGTTACACCGCTACTC
ACCATCCCTGGACACGAAGAAACTGTTTGCTATGAGTGTGTTGCTATCGT
GTCTGACAAGGACCATGGGCTTCGTTACCATCGGTGCACTCAACATTCAG
AGCATTCGTATCGGTGGTAGGGGTACCTTGAGTGCTACCAGGCCAGAAGA
CCCTGATCAGAGGTTCTATGACAAGACCATGATGGTCCTCTTTGACCTGC
CAGACTTCATCAGCATTAGTGCCTTCACACTACTGGCAGTGGTGTGGGCA
GAAGCTTACCTACAGTCTCGAAAGCACTGGTTGTCTTCATCGCTGTATAA
GCGACAGCTTCTGCTGGGCTACATGGTGTTTAATGCAGTGTTGTATGCAG
GCCAGGTGGTGCTGTATGCCTTACTCTTCTTACCCAAGTTCGATAAGAGT
GTTGTGTTGGCATCCATTTACCTGACACTTACAACAGTGAACTTCTTGCT
GCCCATTCTACTGGTCCTTCTTTTCCTGTACCTTACCTGCAACTTCTCCG
GCTTCCCATTCAAATCTGTTGCCTCCAAGAAACGCCTGCACAAGGTTGGG
CGTGTTGTTCTCCTGTGGACAGCGGCAAGGGTAGTATGGGCTGTGTCCAC
CCTAACAGCAGTCTTGGAGTACGCGAGGGTATCAGGGGGGACCAGTCTGA
AACAGGAGCTATACTCAGTGGTGGTTGTGATGGTGTTTTTGGTGACAGAG
CTCTTTCCCTTTGTGGTCTCCCTGGACAATGACGTCCTGATGATGATAGC
AGGCCATGAGCAAGGAGGGGCTTCTGAGGGTCCTGTGGGGTGA
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