mRNA_C-tenellus_contig9148.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Match: UPI00040675B4 (M12 family metallo-peptidase n=1 Tax=Methylocaldum szegediense TaxID=73780 RepID=UPI00040675B4) HSP 1 Score: 136 bits (342), Expect = 2.190e-34 Identity = 83/206 (40.29%), Postives = 116/206 (56.31%), Query Frame = 1 Query: 4 IDVLVLYTAEAIRTTAQQ--LETEIVTSFVDSNLALQNSDVDLTLNLVHVEQTSYVQSGLSSRT--DLSRLRFGSVDGAFQLRNTYSADLVQLVGNYNDYCGIAYLMGTITTGFAPLGVSVVHR----TCLDNFVPLHEFGHNLGCHHDEDNAPPG--LGYRYGYRYCEGTDLYRTVMSYSCPSSYAPVAPYMSNPDIDYLGKPTG 591 ID+LV+YT +A Q +E +I+ + +N A NS +D+ LNLV + + SY ++G S++ D+ G +D LRN Y AD V L+ ++YCGIAY+M ++ + FAP +VVH CL N HE GHN G HD DN+ Y YGYR C ++ VMSY+C S P PY SNP++ Y G+PTG Sbjct: 65 IDLLVVYTPKARANAGGQDGIEAKIINAVTKANQAYLNSQIDMQLNLVKMAEVSYTETGDMSKSLSDVQGTNDGKMDEVHALRNQYGADQVALITTDSNYCGIAYVMTSLGSWFAPYAFAVVHDDSKYNCLSNHSLAHELGHNQGNTHDPDNSSNAGVFPYSYGYRLC---GVFHDVMSYACNS---PRVPYFSNPNVYYNGQPTG 264
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE) HSP 1 Score: 137 bits (344), Expect = 8.310e-34 Identity = 91/218 (41.74%), Postives = 113/218 (51.83%), Query Frame = 1 Query: 4 IDVLVLYTAEAIRTTA---QQLETEIVTSFVDSNLALQNSDV-DLTLNLVHVEQTSYVQ--------SGLSSRTDLSRLRFGSVDGAFQLRNTYSADLVQLVGNYNDYCGIAYLMGTITTGFAPLGVSVVHRTCLDNFVPLHEFGHNLGCHHDEDNAPPGLGYRYGYRYCEGTDLYRTVMSY---SC---PSSYA-PVAP---YMSNPDIDYLGKPTG 591 IDVL+ Y+ EA + QL T IV V N A+ NS + DL LVHV + Y Q + +L L S LRN Y DLVQLVG + CG+ Y+ G A G S+V C DNF HE HN+GC+HD DN+ YR+GYRYC G+D YRT+MSY C P+ A P+ P Y SNP++ YL KPTG Sbjct: 352 IDVLIFYSPEAASSEGISDAQLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPIDSDDIDLEPELDALAANSAVN--DLRNEYQGDLVQLVGYFPGTCGLGYIFN----GNAEFGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDNSETQDEYRHGYRYCTGSDPYRTIMSYYQNGCGGDPTPEADPIVPQVNYFSNPEVTYLNKPTG 563
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Match: A0A3A0CH54_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0CH54_9BACT) HSP 1 Score: 135 bits (340), Expect = 1.990e-33 Identity = 97/205 (47.32%), Postives = 118/205 (57.56%), Query Frame = 1 Query: 1 KIDVLVLYTAEAIRTTA---QQLETEIVTSFVDSNLALQNSDVDLTLNLVHVEQTSYVQSGLSSRTDLSRL---RFGSVDGAFQLRNTYSADLVQLVGNYNDYCGIAYLMGTITTGFAPLGVSVVHRTCL-DNFVPLHEFGHNLGCHHDEDNAPPGL-GYRYGYRYCEGTDLYRTVMSYSCPSSYAPVAPYMSNPDIDYLGKPTG 591 +IDVLVLYT A R A +E+ IVTS +N + NS V+ L LVH+ +TSY +S LS TDL RL G +D A LRNTY ADLV L+ N D CGIA+LM + + F L SV R C N HE GHN GC HD DNA G+ Y YGYR+ G L RT+M+Y P + + SNPD+ Y G PTG Sbjct: 190 RIDVLVLYTTAA-RIAAGGTNGIESLIVTSVNLTNSSYGNSLVNPRLRLVHMAETSYTES-LSGGTDLDRLTDTNDGHIDEAHSLRNTYGADLVALIVNDFDVCGIAWLMTSNSPSFQSLAFSVTARGCAASNLTFAHELGHNQGCQHDRDNAGTGIYPYAYGYRFQSG-GLKRTIMAYD-PGTRVN---HFSNPDVLYNGVPTG 387
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Match: A0A0S8FJ00_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8FJ00_9GAMM) HSP 1 Score: 135 bits (341), Expect = 2.050e-33 Identity = 80/185 (43.24%), Postives = 109/185 (58.92%), Query Frame = 1 Query: 58 LETEIVTSFVDSNLALQNSDVDLTLNLVHVEQTSYVQSGLSSRTDLSRLRF---GSVDGAFQLRNTYSADLVQLVGNYNDYCGIAYLMGTITTGFAPLGVSVVHRTCLDNFVPLHEFGHNLGCHHDEDNA--PPGLGYRYGYRYCE--GTDLYRTVMSYSCPSSYAPVAPYMSNPDIDYLGKPTG 591 +E I+++ +N A QNS +DL LN+V++++T+YV+SG L LR G++D LRN + ADLV L+ ++YCGIAY+M + +T FAP V V + CL N HE GHN G HD N+ P Y YG+R CE GT +RTVMSYSC + SNP++ Y G PTG Sbjct: 201 VENRIISAVEAANQAYQNSALDLQLNIVYLDETAYVESG-DMGVSLDHLRLTADGNMDEVHTLRNQFGADLVALITEDSNYCGIAYVMSSDSTSFAPWAVGVTYSACLTNQTLAHEIGHNQGNMHDRANSSNPGAYAYSYGFRRCETDGTG-FRTVMSYSCNGGTR--VAHFSNPNVTYNGFPTG 381
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Match: UPI00135B5B8B (M12 family metallo-peptidase n=1 Tax=Methylicorpusculum oleiharenae TaxID=1338687 RepID=UPI00135B5B8B) HSP 1 Score: 132 bits (333), Expect = 2.180e-32 Identity = 83/206 (40.29%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 4 IDVLVLYTAEA-IRTTAQQ-LETEIVTSFVDSNLALQNSDVDLTLNLVHVEQTSYVQSGLSSRT--DLSRLRFGSVDGAFQLRNTYSADLVQLVGNYNDYCGIAYLMGTITTGFAPLGVSVVHR----TCLDNFVPLHEFGHNLGCHHDEDNAP--PGLGYRYGYRYCEGTDLYRTVMSYSCPSSYAPVAPYMSNPDIDYLGKPTG 591 IDV+V+YT ++ I Q +E +IV + +N + NS +D+ +NLVH+ + SYV+SG +S + D++ G +D LRN Y AD V L+ CG YLM + +T FA SVVH CL N HE GHN G HHD +A P Y YGYR C+ T +RTVMSY C Y SNP + + G+ TG Sbjct: 234 IDVMVVYTPQSRINAYGQSGIEAKIVNAVAKANQSYINSQIDMQINLVHMAEVSYVESGSTSTSLSDITGTSDGKMDAVHTLRNQYGADQVVLITTDTSACGTGYLMSSPSTSFASYAFSVVHDDSKYACLSNHTLAHELGHNQGSHHDRASATSTPAYDYSYGYRLCQ-TGGFRTVMSYDCSGGTR--VGYFSNPKVTFNGEYTG 436
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Match: A0A521WJ12_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521WJ12_9GAMM) HSP 1 Score: 131 bits (330), Expect = 3.490e-32 Identity = 90/205 (43.90%), Postives = 118/205 (57.56%), Query Frame = 1 Query: 7 DVLVLYTAEAIRTTAQQ---LETEIVTSFVDSNLALQNSDVDLTLNLVHVEQTSYVQSGLSSRTDLSRLRF---GSVDGAFQLRNTYSADLVQLVGNYNDYCGIAYLMGTITTGFAPLGVSVVHRTCLDNFVPLHEFGHNLGCHHDEDNAPPG--LGYRYGYRYC--EGTDLYRTVMSYSCPSSYAPVAPYMSNPDIDYLGKPTG 591 D+LVLY + A RT Q +E+ I+++ +N A NS + L+LNLVH+ +T YV++G + LS LR G +D A LR+ + ADLV LV +YCGIAY+M +++TGFA SV CL HE GHN G HD DN+ Y YGYR C +GT +RTVMSYSC AP + SNP + Y G TG Sbjct: 178 DILVLY-SPASRTRYQSSGGVESRILSAIAAANQAYANSGLALSLNLVHMAETQYVETGDMGQA-LSALRQNGDGQMDEAHALRDLHGADLVALVNEDGNYCGIAYVMTSVSTGFASSAFSVTASNCLSGQTLAHEVGHNQGNMHDRDNSSNAGAYPYSYGYRRCVADGTG-FRTVMSYSCTG--APRVNHFSNPAVLYSGYATG 377
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Match: UPI00111C0E47 (M12 family metallo-peptidase n=2 Tax=unclassified Methylocaldum TaxID=2622260 RepID=UPI00111C0E47) HSP 1 Score: 131 bits (329), Expect = 4.980e-32 Identity = 86/207 (41.55%), Postives = 119/207 (57.49%), Query Frame = 1 Query: 4 IDVLVLYTAEAIRTTA---QQLETEIVTSFVDSNLALQNSDVDLTLNLVHVEQTSYVQSG--LSSRTDLSRLRFGSVDGAFQLRNTYSADLVQLVGNYNDYCGIAYLMGTITTGFAPLGVSVVHR----TCLDNFVPLHEFGHNLGCHHDEDN-APPGL-GYRYGYRYCEGTDLYRTVMSYSCPSSYAPVAPYMSNPDIDYLGKPTG 591 ID+LV+YT +A R A +E +I+ + +N A NS VD+ LNLV + + SY ++G +S +D++ G +D LRN Y AD V L+ ++YCGIAY+M ++ + FAP +VVH CL N HE GHN G HD DN A G+ Y YGYR C ++ VMSYSC S P + SNP++ Y G+PTG Sbjct: 199 IDLLVVYTPQA-RVNAGGVSGIEAKIINAVTKANQAYLNSQVDMQLNLVKMAEVSYTETGNMSTSLSDVTGTSDGKMDEVHSLRNQYGADQVALITAESNYCGIAYVMNSLGSWFAPYAFAVVHDDSKYNCLGNDTLAHELGHNQGNMHDPDNSAYAGVYPYSYGYRIC---GVFHDVMSYSCSS---PRISHFSNPNVYYNGQPTG 398
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE) HSP 1 Score: 130 bits (326), Expect = 2.090e-31 Identity = 88/216 (40.74%), Postives = 113/216 (52.31%), Query Frame = 1 Query: 4 IDVLVLYTAEAI--RTTAQ-QLETEIVTSFVDSNLALQNSDV-DLTLNLVHVEQTSYVQSG------LSSRTDLSRLRFGSVDGAFQLRNTYSADLVQLVGNYNDYCGIAYLMGTITTGFAPLGVSVVHRTCLDNFVPLHEFGHNLGCHHDEDNAPPGLGYRYGYRYCEGTDLYRTVMSY---SC----PSSYAPVAP---YMSNPDIDYLGKPTG 591 IDVL++Y+ EA R A+ QL T IV V N A+ NS + L LV V + Y Q + + +L L S LRN Y DLVQLVG + CG+ Y+ G A G S+V C DNF HE HN+GC+HD++N+ YR+G+RYCEG D YRT+MSY C S P+ P Y SNP++ YL K TG Sbjct: 174 IDVLIVYSPEAAYARGIAEAQLLTRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQMAYIPSDDIDLKPELDALAANS--NVTDLRNQYQGDLVQLVGYFPGTCGLGYIFN----GDAAFGFSLVDSNCFDNFSHTHEIAHNMGCYHDKNNSDTQHAYRHGWRYCEGADPYRTIMSYYHNGCGGDPTSEDDPIVPRVNYFSNPNVTYLNKSTG 383
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Match: A0A4P5XFB4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A4P5XFB4_9BACT) HSP 1 Score: 125 bits (313), Expect = 2.610e-30 Identity = 79/203 (38.92%), Postives = 116/203 (57.14%), Query Frame = 1 Query: 4 IDVLVLYTAEAIRTTA--QQLETEIVTSFVDSNLALQNSDVDLTLNLVHVEQTSYVQSGLSSRTDLSRLRF---GSVDGAFQLRNTYSADLVQLVGNYN--DYCGIAYLMGTITTGFAPLGVSVVHRTCLDNFVPLHEFGHNLGCHHDEDNAPPGLGYRYGYRYCEGTDLYRTVMSYSCPSSYAPVAPYMSNPDIDYLGKPTG 591 +D+LV+YT + + +ET IV + +N + NS V LVH+++ +Y+++G S+ DLS L+ G +D LR Y ADLVQ+V + + YCGI YLM +++TGF+P V RTC+ N HE GHN+GCHHD NA P + Y Y Y Y ++YRT+MSY+ P + + S P++ Y G G Sbjct: 123 VDLLVVYTPLSRQNAGGVAAIETAIVGAIAQANGSFINSGVSTQFRLVHMQEVNYLETGSSA--DLSVLQNPADGVLDEVQALRQDYGADLVQMVTDPSAAQYCGIGYLMTSLSTGFSPFAFGVTVRTCISNKSMTHECGHNMGCHHDFANAGPAI-YPYSYGYRTPDNVYRTIMSYA-PGARVNL---WSGPNVQYFGYAMG 318
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Match: A0A835YSD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD2_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.050e-29 Identity = 67/173 (38.73%), Postives = 94/173 (54.34%), Query Frame = 1 Query: 91 SNLALQNSDVDLTLNLVHVEQTSYVQSGLSSRTDLSRLRFGSVDGAFQLRNTYSADLVQLVGNYNDYCGIAYLMGTITTGFAPLGVSVVHRTCLDNFVPLHEFGHNLGCHHD--EDNAPPGLG----YRYGYRYCEGTDLYRTVMSYSCPSSYAPVAPYMSNPDIDYLGKPTG 591 +N L NS V LV++ ++Y + + T + + G+V G RNTY ADL+Q++ YCG+ +LM + F G S V C N +HE GHN+GCHHD D A G Y +GYRYC + +RTVM+Y+C S A PY S+P++ Y+G PTG Sbjct: 376 ANQVLVNSGVGFQFQLVNLMYSNYADNNMDQAT--TDMLAGTVPGVAAARNTYGADLIQMMTEDTAYCGLGWLMTDKSPSFEKYGNSAVFNDCFMNLSHIHEIGHNMGCHHDIGTDGANAAAGSLWPYSFGYRYCSAPN-FRTVMAYACTSGSASRMPYFSSPNVYYMGYPTG 545 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9148.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9148.1.1 >prot_C-tenellus_contig9148.1.1 ID=prot_C-tenellus_contig9148.1.1|Name=mRNA_C-tenellus_contig9148.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=197bp KIDVLVLYTAEAIRTTAQQLETEIVTSFVDSNLALQNSDVDLTLNLVHVEback to top mRNA from alignment at C-tenellus_contig9148:3453..5601- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9148.1.1 ID=mRNA_C-tenellus_contig9148.1.1|Name=mRNA_C-tenellus_contig9148.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2149bp|location=Sequence derived from alignment at C-tenellus_contig9148:3453..5601- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9148:3453..5601- >mRNA_C-tenellus_contig9148.1.1 ID=mRNA_C-tenellus_contig9148.1.1|Name=mRNA_C-tenellus_contig9148.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=591bp|location=Sequence derived from alignment at C-tenellus_contig9148:3453..5601- (Choristocarpus tenellus KU2346)back to top |