mRNA_C-tenellus_contig9086.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Match: A0A6H5KG47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG47_9PHAE) HSP 1 Score: 298 bits (762), Expect = 4.150e-87 Identity = 149/227 (65.64%), Postives = 174/227 (76.65%), Query Frame = 3 Query: 696 MDKLSKSDPFVVVKIKTDVDPEWLELGRTEIVSNTQDPFFTTQLSAMFLFEEVQHLRFEVYDADCVYKSNASSAVLILAKQDFQGSAETTVASVLGSVDQTLGLKLDRPRGKGSTAEVFVRMEEVAHQHDLVTLKLRAAKVDKKDLTSSDPFLRISRALERGEWVSIFKTEVKNRTLNPVWRPIQGSVQRLVNGDLYRPLRFDCWDYDLGGGHDFIGSCEASIIDLQ 1376 MDKLSKSDPFVV+K KTD D W E+GRTEI+SN Q+P FT Q S +LFEEVQ +R EVYD D +K+N ++ V L +QDFQG AETT+A VLGS QT L L + G+ A V +RM+EV HQHDLVTLKLRA VDKKDLTSSDP+L+I+R LE GE IFKTEV++RTLNPVWR IQG+VQ+L NGDL RPLR +CWDYD GGHDFIG C ASI D+Q Sbjct: 57 MDKLSKSDPFVVIKWKTDSDETWREIGRTEIISNDQNPNFTAQFSLTYLFEEVQGVRLEVYDVDTAFKTNDATNV-DLGRQDFQGFAETTMAEVLGSSGQTSTLPLMKNTGRAGQAVVSIRMDEVEHQHDLVTLKLRALNVDKKDLTSSDPYLKIARVLETGEQTYIFKTEVQSRTLNPVWREIQGTVQQLANGDLLRPLRVECWDYDRAGGHDFIGGCSASIADMQ 282
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Match: D7FXN1_ECTSI (Copine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN1_ECTSI) HSP 1 Score: 182 bits (462), Expect = 2.250e-45 Identity = 114/253 (45.06%), Postives = 150/253 (59.29%), Query Frame = 3 Query: 663 VHTQ---LYTRCRV---------MDKLSKSDPFVVVKIKTDVDP-EWLELGRTEIVSNTQDPFFTTQLSAMFLFEEVQHLRFEVYDADCVYKSNASSAVLI-LAKQDFQGSAETTVASVLGSVDQTL-GLKLDRPRGKGSTAEVFVRMEEVAHQHDLVTLKLRAAKVDKKDLTSSDPFLRISRALERGEWVSIFKTEVKNRTLNPVWRPIQGSVQRLVNGDLYRPLRFDCWDYDLGGGHDFIGSCEASIIDLQ 1376 +HT+ LYTR ++ MD SKSDPFV+VK+ + D E E+GRTEI+SN+ DP F T + F FEEVQ LRFEVYD D Y S S A LI +KQDFQG+AE +A V+G DQT GL GKG + +V VR EEVA+ + L + L + + K PFLR+SR E+G + FKTEV + W PI+ S++ L NGD YRPL + + + G H +GSC+AS+ DL+ Sbjct: 3 MHTRPDPLYTRLQLSISCKGLVNMDTFSKSDPFVLVKLHSPSDSNESKEIGRTEIISNSLDPNFVTIVPVTFKFEEVQTLRFEVYDVDTAYSS--SDATLIDPSKQDFQGAAECVLAQVIGGRDQTWEGLLSGAKTGKGGSPKVVVRAEEVANSNGLAEITLAGSNIGK------GPFLRVSRVSEKGPPIRCFKTEVAKGSPPRPWAPIEISLKVLANGDPYRPLIIEAFTWKKSGNHALLGSCKASVNDLK 247
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Match: A0A6H5L3T5_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T5_9PHAE) HSP 1 Score: 176 bits (446), Expect = 7.940e-43 Identity = 111/259 (42.86%), Postives = 150/259 (57.92%), Query Frame = 3 Query: 624 NSSTQLLSLLPQDVHTQLYTRCRV---MDKLSKSDPFVVVKIKTDVDP-EWLELGRTEIVSNTQDPFFTTQLSAMFLFEEVQHLRFEVYDADCVYKSNASSAVLILAKQDFQGSAETTVASVLGSVDQTL-GLKLDRPRGKGSTAEVFVRMEEVAHQHDLVTLKLRAAKVDKKDLTSSDPFLRISRALERGEWVSIFKTEVKNRTLNPVWRPIQGSVQRLVNGDLYRPLRFDCWDYD---LGGGHDFIGSCEASIIDLQ 1376 ++++ L P QL C+ MD S SDPFV+VKI + D E E+GRTEI+SN+ DP F T + F FEEVQ LRFEVYD D Y S+ ++ + +KQDFQG+AE +A V+G DQT GL RGKG + +V VR EEVA+ L + L + + K PFLR+SR E+G + FKTEV + W PI+ S+Q L NGD YRPL + + + L G H +GSC+AS+ D++ Sbjct: 33 DAASMLSESAPLYTRLQLSISCKGLVNMDAFSNSDPFVLVKIHSPSDSNESKEIGRTEIISNSLDPKFVTIVPVTFKFEEVQTLRFEVYDVDTAYSSSDATHI-DPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKRGKGGSPKVVVRAEEVANCDGLAQITLAGSNIGKW------PFLRVSRVSEKGPPIRCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFTWKKRVLSGNHVLLGSCKASVNDIK 284
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Match: A0A6H5LMQ8_9PHAE (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LMQ8_9PHAE) HSP 1 Score: 173 bits (439), Expect = 5.970e-42 Identity = 109/259 (42.08%), Postives = 153/259 (59.07%), Query Frame = 3 Query: 624 NSSTQLLSLLPQDVHTQLYTRCRVM---DKLSKSDPFVVVKIKTDVDP-EWLELGRTEIVSNTQDPFFTTQLSAMFLFEEVQHLRFEVYDADCVYKSNASSAVLILAKQDFQGSAETTVASVLGSVDQTL-GLKLDRPRGKGSTAEVFVRMEEVAHQHDLVTLKLRAAKVDKKDLTSSDPFLRISRALERGEWVSIFKTEVKNRTLNPVWRPIQGSVQRLVNGDLYRPLRFDCWDYD---LGGGHDFIGSCEASIIDLQ 1376 ++++ L + P QL C+ + D+LSKSDPFV+VK+ + D E E+GRTEI++N+ DP F T + F FEEVQ LRFEVYD D Y S+ ++ + +KQDFQG+AE +A V+G DQT GL RGKG + +V VR EEVA+ + L + L + + FLRISR E+G + FKTEV + W PI+ S+Q L NGD YRPL + + + L G H +GSC+AS+ D++ Sbjct: 29 DAASMLSASGPLYTRLQLSISCKQLVNLDQLSKSDPFVLVKLHSPSDGNESKEIGRTEIITNSLDPKFVTIVPVTFKFEEVQTLRFEVYDVDTAYSSSDATHI-DPSKQDFQGAAECALAQVVGGRDQTWEGLLSGARRGKGDSPKVVVRAEEVANSNALAEITLAGSNI------GHGSFLRISRLSEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFTWKKRVLSGNHVLLGSCKASVNDIK 280
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Match: F2U8H3_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8H3_SALR5) HSP 1 Score: 167 bits (424), Expect = 1.620e-40 Identity = 98/241 (40.66%), Postives = 134/241 (55.60%), Query Frame = 3 Query: 666 HTQLYTRCRVM---DKLSKSDPFVVVKIKTDVDPEWLELGRTEIVSNTQDPFFTTQLSAMFLFEEVQHLRFEVYDADCVYKSNASSAVLILAKQDFQGSAETTVASVLGSVDQTLGLKLDRPRGKGSTAEVFVRMEEVAHQHDLVTLKLRAAKVDKKDLTS-SDPFLRISRALERGEWVSIFKTEVKNRTLNPVWRPIQGSVQRLVNGDLYRPLRFDCWDYDLGGGHDFIGSCEASIIDLQ 1376 H QL+ +C + D LSKSDPFVV+ + + ++E GRTE +SN +P F T + FE Q LRF+VYD D S L QDF G +TT+ S++G L L GK + + V EE A +V ++RA KVDKKDL SDP++ ISR L G W ++ KTEV TLNP+W P + + RL NG+ L+F+ +D+D G HDFIGS E ++ +Q Sbjct: 9 HLQLHVQCSKLPRKDTLSKSDPFVVIYTFDERNNAFVEYGRTETLSNNHNPDFATGFDLSYFFETTQKLRFDVYDEDTKGGS--------LQAQDFIGRIDTTLGSIMGEYHGRLTAPLLSKSGKKTKGVITVLAEEAAKSAGVVKFRMRATKVDKKDLFGKSDPYVVISRNLS-GSWATVHKTEVVRNTLNPLWAPFEVDLTRLCNGNPETALKFEVFDWDRVGSHDFIGSFETTLAAIQ 240
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Match: A0A6S7I5X7_PARCT (Copine-3-like isoform X1 n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I5X7_PARCT) HSP 1 Score: 156 bits (395), Expect = 1.100e-38 Identity = 90/227 (39.65%), Postives = 127/227 (55.95%), Query Frame = 3 Query: 699 DKLSKSDPFVVVKIKTDVDPEWLELGRTEIVSNTQDPFFTTQLSAMFLFEEVQHLRFEVYDADCVYKSNASSAVLILAKQDFQGSAETTVASVLGSVDQTLGLKLDRPRGKGSTAEVFVRMEEVAHQHDLVTLKLRAAKVDKKDLTS-SDPFLRISRALERGEWVSIFKTEVKNRTLNPVWRPIQGSVQRLVNGDLYRPLRFDCWDYDLGGGHDFIGSCEASIIDLQ 1376 D LSKSDP VV I + +W+E+GRTE + + +P F ++ + FEE+Q L+F VYD D L K DF G E T+ ++ S + L+L G G+ + + EE+A HDLV RA+K+DKKD SDP+L SRA E G +V +TEV TLNP W+P + SV L N DL R ++ DC+D+D G HDFIG ++ +++ Sbjct: 37 DVLSKSDPMAVVCIFSG--NQWVEVGRTEQIKDNLNPNFAQSVTVDYHFEELQKLKFSVYDID--------DPKADLRKADFLGELECTLGQLVSSQKYSKPLQLP---GTGNAGTISITAEELATNHDLVDFTFRASKLDKKDFFGKSDPYLEFSRAKEDGSFVVFHRTEVIKNTLNPSWKPFRLSVVDLCNADLNRTIKVDCYDWDSDGSHDFIGQFTTNLNEME 250
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Match: UPI00106B72FF (copine-8-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B72FF) HSP 1 Score: 160 bits (406), Expect = 3.840e-38 Identity = 94/255 (36.86%), Postives = 139/255 (54.51%), Query Frame = 3 Query: 624 NSSTQLLSLLPQDVHTQLYTRCRV---MDKLSKSDPFVVVKIKTDVDPEWLELGRTEIVSNTQDPFFTTQLSAMFLFEEVQHLRFEVYDADCVYKSNASSAVLILAKQDFQGSAETTVASVLGSVDQTLGLKLDRPRGKGSTAEVFVRMEEVAHQHDLVTLKLRAAKVDKKDLTS-SDPFLRISRALERGEWVSIFKTEVKNRTLNPVWRPIQGSVQRLVNGDLYRPLRFDCWDYDLGGGHDFIGSCEASIIDLQ 1376 +SS+++ + +P ++ +C MD SKSDP VV+ IK EW E GRTE + NT +P F + + FEE+QHLRF+VYD D S+AS L+ DF G +TT+ S++G KL+ + + + +EEV+ D+VTL +A K+DKKD SDPFL R E + ++ +TEV TLNP W+ + L NGD R + +C+D+D GGHDFIG ++ ++ Sbjct: 20 SSSSRIQNAIPA-TQVEISVKCTNLADMDVFSKSDPIVVLFIKATDGSEWREFGRTEKIMNTLNPIFVKKFVMDYFFEEIQHLRFQVYDVD---SSSAS-----LSDHDFIGRLDTTLGSIIGEHGGHFESKLEN-KEMPKCGSIILTVEEVSDCRDVVTLHFKANKLDKKDFFGKSDPFLVFYRCNEDSSFTAVHRTEVIKNTLNPTWKAFSVLSRALCNGDYDRSILVECYDWDRNGGHDFIGQFSTTLREMN 264
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Match: A0A3M6V0C5_POCDA (Uncharacterized protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6V0C5_POCDA) HSP 1 Score: 160 bits (404), Expect = 5.240e-38 Identity = 95/239 (39.75%), Postives = 132/239 (55.23%), Query Frame = 3 Query: 672 QLYTRCRV---MDKLSKSDPFVVVKIKTDVDPEWLELGRTEIVSNTQDPFFTTQLSAMFLFEEVQHLRFEVYDADCVYKSNASSAVLILAKQDFQGSAETTVASVLGSVDQTLGLKLDRPRGKGSTAEVFVRMEEVAHQHDLVTLKLRAAKVDKKDLTS-SDPFLRISRALERGEWVSIFKTEVKNRTLNPVWRPIQGSVQRLVNGDLYRPLRFDCWDYDLGGGHDFIGSCEASIIDLQ 1376 +L+ CR MD SKSDP VV+ + EW E GRTE + NT +P F + + FEE+Q LRFEVYD D K++A L+ DF G+AE T+ S++G L +L P+ K + V EE++ D+VTL+ + K+DKKD SDPFL R E + ++ +TEV TLNP W+P + L NGD R +R +C+D+D GGHD IG +I +L Sbjct: 31 ELHISCRNLADMDVFSKSDPMVVMYTQGMGSKEWREFGRTEHIMNTLNPDFVKTFTIHYFFEEMQKLRFEVYDLD---KNSAK-----LSDHDFIGAAECTLGSIVGEFGGRLQKQLVNPKLK-KPGTIIVSAEELSDCKDVVTLQFKGHKLDKKDFFGKSDPFLVFYRCNEDNSYTAVHRTEVIKNTLNPTWKPFTIHARALCNGDYDRSIRVECYDWDRDGGHDLIGIFSTTINELN 260
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Match: D8T435_SELML (Uncharacterized protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T435_SELML) HSP 1 Score: 159 bits (403), Expect = 1.050e-37 Identity = 95/253 (37.55%), Postives = 144/253 (56.92%), Query Frame = 3 Query: 651 LPQDVHTQLY---TRCRVMDKLSKSDPFVVVKIKTDVDPEWLELGRTEIVSNTQDPFFTTQLSAMFLFEEVQHLRFEVYDADCVYKSNASSAVLILAKQDFQGSAETTVASVLGSVDQTLGLKLDRP-------RGKGSTAEVFVRMEEVAHQHDLVTLKLRAAKVDKKDLTS-SDPFLRISRALERGEWVSIFKTEVKNRTLNPVWRPIQGSVQRLVNGDLYRPLRFDCWDYDLGGGHDFIGSCEASIIDLQ 1376 +P DV QL+ ++ R D LSKSDP V I+ D E E+GRTE+VSNT +P + T + + F+++Q L F VYD D Y + + L L +QDF G +A V+ + Q+ L G S + ++ EE+ H +V L LR + ++ KD S SDPFLR+SR E G V ++K+EVK L+P W+ ++ ++Q+L NG++ RPL +C++Y+ G HD IGS + S+ +LQ Sbjct: 42 VPADVQVQLWISASKLRDKDFLSKSDPLAVAFIRKDGVLE--EVGRTEVVSNTLNPSWVTDIKVSYSFQDIQQLLFRVYDIDTKY-AGVNPQELPLEEQDFLGEMTCLLAEVVAAPGQSFSRLLQDKVDGGTDKTGVKSMGTLTIKAEEMQHSKSIVELVLRCSDLNNKDFFSKSDPFLRLSRLREDGSSVPVYKSEVKKNNLHPTWKLVRTTLQQLNNGNMDRPLVVECFNYNGNGRHDLIGSTQVSLNELQ 291
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Match: UPI001F03D920 (copine-9-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03D920) HSP 1 Score: 159 bits (402), Expect = 1.200e-37 Identity = 92/255 (36.08%), Postives = 139/255 (54.51%), Query Frame = 3 Query: 624 NSSTQLLSLLPQDVHTQLYTRCRV---MDKLSKSDPFVVVKIKTDVDPEWLELGRTEIVSNTQDPFFTTQLSAMFLFEEVQHLRFEVYDADCVYKSNASSAVLILAKQDFQGSAETTVASVLGSVDQTLGLKLDRPRGKGSTAEVFVRMEEVAHQHDLVTLKLRAAKVDKKD-LTSSDPFLRISRALERGEWVSIFKTEVKNRTLNPVWRPIQGSVQRLVNGDLYRPLRFDCWDYDLGGGHDFIGSCEASIIDLQ 1376 +SS + + +P ++ +C+ MD SKSDP VV+ +K+ EW E GRTE++ NT +P F + + FEE+Q LRF VYD D SN+ L+ DF G + T+ S++G L KL+ + + + +EEV+ D+ TL +A K+DKKD L SDPFL R E + ++ +TEV TLNP+W+P + L NGD R + +C+D+D GGHDFIG ++ ++ Sbjct: 20 SSSIHIQNAVPA-TQVEISVKCKNLADMDLFSKSDPVVVLFVKSVDGREWREFGRTEVIMNTLNPVFVKKFIMNYFFEEIQELRFHVYDVD----SNSPR----LSDHDFIGRLDITLGSIIGEHGGRLEAKLEN-KETSKCGSIILTVEEVSECKDVATLHFKANKLDKKDFLGKSDPFLVFYRCNEDSSFTAVHRTEVIKNTLNPMWKPFSVPGRALCNGDYDRSILVECYDWDRDGGHDFIGHFSTTLREMN 264 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9086.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig9086.2.1 >prot_C-tenellus_contig9086.2.1 ID=prot_C-tenellus_contig9086.2.1|Name=mRNA_C-tenellus_contig9086.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=249bp MDKLSKSDPFVVVKIKTDVDPEWLELGRTEIVSNTQDPFFTTQLSAMFLFback to top mRNA from alignment at C-tenellus_contig9086:611..5142- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig9086.2.1 ID=mRNA_C-tenellus_contig9086.2.1|Name=mRNA_C-tenellus_contig9086.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4532bp|location=Sequence derived from alignment at C-tenellus_contig9086:611..5142- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig9086:611..5142- >mRNA_C-tenellus_contig9086.2.1 ID=mRNA_C-tenellus_contig9086.2.1|Name=mRNA_C-tenellus_contig9086.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=747bp|location=Sequence derived from alignment at C-tenellus_contig9086:611..5142- (Choristocarpus tenellus KU2346)back to top |