mRNA_C-tenellus_contig888.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Match: A0A7S3XKA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKA2_HETAK) HSP 1 Score: 127 bits (319), Expect = 2.560e-31 Identity = 63/127 (49.61%), Postives = 81/127 (63.78%), Query Frame = 3 Query: 489 SGAESTSPPS-----IDSLKLKLSEAPESINFEDTMNAIAESYNYTPKRFDNGVASSDAGVNEGSCKVLSMGKIAGLTTDEVLTCFGEHFRSVLEDPNGNSHGNIRAFMKSGWEGVSFPDGLSLTPK 854 S E SPP + K+KL +P+ + FE+TM I+ +Y+YT K F NG S+ AG N GSCKV S GK+A L+ + L CFGEH+R VL DP+G +HGNIR FM GW G+ F +GL LT K Sbjct: 48 SNEEGVSPPGGLPRQVVDFKIKLDSSPDDVFFEETMGIISSNYDYTEKPFKNGELSNAAGENGGSCKVFSFGKLAVLSEQQTLNCFGEHYRDVLSDPDGTAHGNIRNFMTKGWNGIEFGEGLGLTLK 174
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Match: A0A813DTD3_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DTD3_POLGL) HSP 1 Score: 134 bits (337), Expect = 3.240e-30 Identity = 64/111 (57.66%), Postives = 78/111 (70.27%), Query Frame = 3 Query: 519 IDSLKLKLSEAPESINFEDTMNAIAESYNYTPKRFDNGVASSDAGVNEGSCKVLSMGKIAGLTTDEVLTCFGEHFRSVLEDPNGNSHGNIRAFMKSGWEGVSFPDGLSLTP 851 I +L+ + S + F +T+ AIA + YTPKRF NG S AG NEGSCKV S+GK+AG + EVL CFGEH++ VL DP G SHGNIRAFMK GW GV FPDG++L P Sbjct: 356 IKALRARFSAGQSELAFAETLAAIAADFEYTPKRFVNGGVESAAGSNEGSCKVFSLGKLAGFSEAEVLACFGEHYQQVLGDPAGTSHGNIRAFMKHGWAGVDFPDGVALEP 466
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Match: UPI001C559F94 (HopJ type III effector protein n=1 Tax=Aquimarina litoralis TaxID=584605 RepID=UPI001C559F94) HSP 1 Score: 116 bits (290), Expect = 6.350e-28 Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = 3 Query: 537 KLSEAPESINFEDTMNAIAESYNYTPKRFDNGVASSDAGVNEGSCKVLSMGKIAGLTTDEVLTCFGEHFRSVLEDPNGNSHGNIRAFMKSGWEGVSFPDGLSLTPK 854 KL + PE I FE+T+N I Y++TP F NG +++ G N GSCK+ S K+ LT +E L CFGEH+++VL+DPNG+SH NIR FMK+GWE +SF + +LT K Sbjct: 9 KLRQTPEEIIFEETINVIDTYYSFTPSSFTNGEINNEVGQNSGSCKLFSFAKLQNLTQEETLYCFGEHYKNVLQDPNGSSHQNIRNFMKTGWEKLSFKE-QALTEK 113
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Match: UPI001F45A381 (HopJ type III effector protein n=1 Tax=Polaribacter sp. DS7-9 TaxID=2836891 RepID=UPI001F45A381) HSP 1 Score: 115 bits (288), Expect = 1.190e-27 Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 519 IDSLKLKLSEAPESINFEDTMNAIAESYNYTPKRFDNGVASSDAGVNEGSCKVLSMGKIAGLTTDEVLTCFGEHFRSVLEDPNGNSHGNIRAFMKSGWEGVSFPDGLSL 845 I K KL I F +TM I ++YN+TP F NG + AG N GSCK+ + K+ LT DE LTCFGEH+++VLED NGNSH NIR FMK+G++G+SF DG +L Sbjct: 3 IQEFKTKLKSNTSEIAFAETMQVIEDNYNFTPTAFTNGEIENKAGENSGSCKLFAFAKLENLTEDETLTCFGEHYKNVLEDENGNSHQNIRNFMKTGFKGLSF-DGEAL 110
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Match: A0A2K8VM92_9FLAO (Type III effector n=4 Tax=Polaribacter TaxID=52959 RepID=A0A2K8VM92_9FLAO) HSP 1 Score: 114 bits (285), Expect = 3.220e-27 Identity = 56/103 (54.37%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 519 IDSLKLKLSEAPESINFEDTMNAIAESYNYTPKRFDNGVASSDAGVNEGSCKVLSMGKIAGLTTDEVLTCFGEHFRSVLEDPNGNSHGNIRAFMKSGWEGVSF 827 I K KL P SI F DTM I ++YN+TP F NG + AG N GSCK+ + KI +T +E L CFGEH+++VLED NG+SH NIR FMKSG+EG+SF Sbjct: 3 IQEFKTKLKANPTSILFADTMQVIEDNYNFTPTSFTNGDIKNKAGENSGSCKLFAFAKIQKMTKEEALFCFGEHYKNVLEDENGDSHQNIRNFMKSGFEGLSF 105
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Match: A0A176TCS5_9FLAO (Type III effector n=4 Tax=Polaribacter TaxID=52959 RepID=A0A176TCS5_9FLAO) HSP 1 Score: 113 bits (283), Expect = 6.230e-27 Identity = 57/110 (51.82%), Postives = 74/110 (67.27%), Query Frame = 3 Query: 519 IDSLKLKLSEAPESINFEDTMNAIAESYNYTPKRFDNGVASSDAGVNEGSCKVLSMGKIAGLTTDEVLTCFGEHFRSVLEDPNGNSHGNIRAFMKSGWEGVSFP-DGLSL 845 I L KL P SINF DTM I ++YN+TP F NG ++AG N GSCK+ + LT +E L+CFGEH+++VLED NG+SH NIR FMK+G++G+SF D L L Sbjct: 3 IQELITKLKSNPTSINFADTMQVIEDNYNFTPTTFTNGDIKNNAGENSGSCKLFAFAVAQKLTKEEALSCFGEHYKNVLEDENGDSHQNIRNFMKTGFDGLSFEGDALEL 112
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Match: A0A7L8ABU2_9FLAO (HopJ type III effector protein n=4 Tax=Polaribacter TaxID=52959 RepID=A0A7L8ABU2_9FLAO) HSP 1 Score: 113 bits (283), Expect = 6.230e-27 Identity = 58/112 (51.79%), Postives = 74/112 (66.07%), Query Frame = 3 Query: 519 IDSLKLKLSEAPESINFEDTMNAIAESYNYTPKRFDNGVASSDAGVNEGSCKVLSMGKIAGLTTDEVLTCFGEHFRSVLEDPNGNSHGNIRAFMKSGWEGVSFPDGLSLTPK 854 I K L P +I F DTM I E YN+TP F NG ++AG N GSCK+ + K+ LT +E L CFGEH++SVLED NG+SH NIR FMK+G+EG+SF +G +L K Sbjct: 3 IQQFKTILKSNPTAITFSDTMQVIEEFYNFTPTTFTNGEIKNNAGKNSGSCKLFAFAKLQKLTKEETLFCFGEHYKSVLEDENGDSHQNIRNFMKTGFEGLSF-EGEALELK 113
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Match: UPI001F0A53D0 (HopJ type III effector protein n=1 Tax=Tenacibaculum sp. K20-16 TaxID=2910675 RepID=UPI001F0A53D0) HSP 1 Score: 112 bits (281), Expect = 1.210e-26 Identity = 58/112 (51.79%), Postives = 74/112 (66.07%), Query Frame = 3 Query: 519 IDSLKLKLSEAPESINFEDTMNAIAESYNYTPKRFDNGVASSDAGVNEGSCKVLSMGKIAGLTTDEVLTCFGEHFRSVLEDPNGNSHGNIRAFMKSGWEGVSFPDGLSLTPK 854 I K KL P SINF +TM I +Y +TP F NG ++AG N GSCK+ + K+ L +E L CFGEH++SVLED NG+SH NIR FMKSG+EG+SF +G +L K Sbjct: 3 IQEFKTKLKANPTSINFVETMQVIENNYTFTPTAFTNGDIKNNAGENSGSCKLFAFAKLQKLQKEETLFCFGEHYKSVLEDKNGDSHQNIRNFMKSGFEGLSF-NGEALALK 113
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Match: A0A1Y0N0Q3_9FLAO (Type III effector n=3 Tax=Polaribacter TaxID=52959 RepID=A0A1Y0N0Q3_9FLAO) HSP 1 Score: 112 bits (281), Expect = 1.240e-26 Identity = 57/113 (50.44%), Postives = 76/113 (67.26%), Query Frame = 3 Query: 519 IDSLKLKLSEAPESINFEDTMNAIAESYNYTPKRFDNGVASSDAGVNEGSCKVLSMGKIAGLTTDEVLTCFGEHFRSVLEDPNGNSHGNIRAFMKSGWEGVSFPDGLSLTPKA 857 I K KL P SINF DTM I ++YN+TP F NG +++AG N GSCK+ + + L +E L CFGEH+++VLED NG+SH NIR FM SG+EG+SF +G +L K+ Sbjct: 3 IQEFKTKLKSNPTSINFADTMQVIEDNYNFTPTTFTNGEITNNAGENSGSCKLFAFAQHQKLRKEETLFCFGEHYKNVLEDENGDSHQNIRNFMNSGFEGLSF-EGEALELKS 114
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Match: A0A2U2J8H4_9FLAO (Type III effector n=1 Tax=Polaribacter aquimarinus TaxID=2100726 RepID=A0A2U2J8H4_9FLAO) HSP 1 Score: 112 bits (280), Expect = 1.730e-26 Identity = 58/110 (52.73%), Postives = 72/110 (65.45%), Query Frame = 3 Query: 519 IDSLKLKLSEAPESINFEDTMNAIAESYNYTPKRFDNGVASSDAGVNEGSCKVLSMGKIAGLTTDEVLTCFGEHFRSVLEDPNGNSHGNIRAFMKSGWEGVSFP-DGLSL 845 I K KL E P +I F +TM I + YN+TP F NG +++AG N GSCK+ + K LT +E L CFGEH+ SVLED G SH NIR FMK+G+EG+SF D LSL Sbjct: 3 IQEFKTKLKENPTAITFAETMQVIEDIYNFTPTAFTNGDVTNNAGENSGSCKLFAFAKRQKLTKEETLFCFGEHYTSVLEDEKGTSHQNIRNFMKTGFEGLSFQSDALSL 112 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig888.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig888.3.1 >prot_C-tenellus_contig888.3.1 ID=prot_C-tenellus_contig888.3.1|Name=mRNA_C-tenellus_contig888.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=278bp MKTSMFMFSAAALAFSASEVMAFLLPSSLVAGTTSLTAVTSSTRVITTHNback to top mRNA from alignment at C-tenellus_contig888:3279..4722+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig888.3.1 ID=mRNA_C-tenellus_contig888.3.1|Name=mRNA_C-tenellus_contig888.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1444bp|location=Sequence derived from alignment at C-tenellus_contig888:3279..4722+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig888:3279..4722+ >mRNA_C-tenellus_contig888.3.1 ID=mRNA_C-tenellus_contig888.3.1|Name=mRNA_C-tenellus_contig888.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=834bp|location=Sequence derived from alignment at C-tenellus_contig888:3279..4722+ (Choristocarpus tenellus KU2346)back to top |